RNA–Protein interactions for RNA: ENST00000522456.1

HOXA3-205, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-205ENST00000522456 TNNT2P45379 298 aaPredicted RBP29.93■■■□□ 2.38
HOXA3-205ENST00000522456 KIF24Q5T7B8 1368 aa29.92■■■□□ 2.38
HOXA3-205ENST00000522456 PAPPAQ13219 1627 aa29.92■■■□□ 2.38
HOXA3-205ENST00000522456 NSD2O96028 1365 aa29.91■■■□□ 2.38
HOXA3-205ENST00000522456 PTGER2P43116 358 aa29.91■■■□□ 2.38
HOXA3-205ENST00000522456 ATF5Q9Y2D1 282 aaPredicted RBP29.91■■■□□ 2.38
HOXA3-205ENST00000522456 PPM1GO15355 546 aaPredicted RBP29.9■■■□□ 2.38
HOXA3-205ENST00000522456 MORC1Q86VD1 984 aa29.89■■■□□ 2.38
HOXA3-205ENST00000522456 EMILIN1Q9Y6C2 1016 aa29.89■■■□□ 2.38
HOXA3-205ENST00000522456 SMG6Q86US8 1419 aaKnown RBP29.88■■■□□ 2.37
HOXA3-205ENST00000522456 ANKRD26Q9UPS8 1709 aa29.88■■■□□ 2.37
HOXA3-205ENST00000522456 PER1O15534 1290 aaPredicted RBP29.88■■■□□ 2.37
HOXA3-205ENST00000522456 FLT4P35916 1363 aa29.88■■■□□ 2.37
HOXA3-205ENST00000522456 MTFR1LQ9H019 292 aa29.87■■■□□ 2.37
HOXA3-205ENST00000522456 HSP90AB2PQ58FF8 381 aa29.86■■■□□ 2.37
HOXA3-205ENST00000522456 AMER1Q5JTC6 1135 aaPredicted RBP29.86■■■□□ 2.37
HOXA3-205ENST00000522456 DDX54Q8TDD1 881 aaKnown RBP29.84■■■□□ 2.37
HOXA3-205ENST00000522456 POLKQ9UBT6 870 aa29.84■■■□□ 2.37
HOXA3-205ENST00000522456 INSRP06213 1382 aa29.84■■■□□ 2.37
HOXA3-205ENST00000522456 KAT6BQ8WYB5 2073 aa29.81■■■□□ 2.36
HOXA3-205ENST00000522456 MAP2P11137 1827 aaKnown RBP29.81■■■□□ 2.36
HOXA3-205ENST00000522456 CC2D1BQ5T0F9 858 aaKnown RBP29.81■■■□□ 2.36
HOXA3-205ENST00000522456 CNGB1Q14028 1251 aaPredicted RBP29.8■■■□□ 2.36
HOXA3-205ENST00000522456 ZNF827Q17R98 1081 aa29.8■■■□□ 2.36
HOXA3-205ENST00000522456 SGIP1Q9BQI5 828 aa29.8■■■□□ 2.36
HOXA3-205ENST00000522456 FHDC1Q9C0D6 1143 aaPredicted RBP29.8■■■□□ 2.36
HOXA3-205ENST00000522456 LRRC4BQ9NT99 713 aa29.8■■■□□ 2.36
HOXA3-205ENST00000522456 RGPD2P0DJD1 1756 aa29.77■■■□□ 2.36
HOXA3-205ENST00000522456 DOT1LQ8TEK3 1739 aa29.77■■■□□ 2.36
HOXA3-205ENST00000522456 SHANK3Q9BYB0 1731 aa29.76■■■□□ 2.36
HOXA3-205ENST00000522456 MEGF6O75095 1541 aa29.76■■■□□ 2.36
HOXA3-205ENST00000522456 SLC27A3Q5K4L6 730 aa29.76■■■□□ 2.35
HOXA3-205ENST00000522456 SYT17Q9BSW7 474 aa29.76■■■□□ 2.35
HOXA3-205ENST00000522456 NBPF6Q5VWK0 638 aa29.75■■■□□ 2.35
HOXA3-205ENST00000522456 NBPF4Q96M43 638 aa29.75■■■□□ 2.35
HOXA3-205ENST00000522456 SYTL4Q96C24 671 aaPredicted RBP29.74■■■□□ 2.35
HOXA3-205ENST00000522456 ZCRB1Q8TBF4 217 aaKnown RBP29.73■■■□□ 2.35
HOXA3-205ENST00000522456 AKT1S1Q96B36 256 aa29.73■■■□□ 2.35
HOXA3-205ENST00000522456 ARXQ96QS3 562 aa29.73■■■□□ 2.35
HOXA3-205ENST00000522456 QSER1Q2KHR3 1735 aa29.73■■■□□ 2.35
HOXA3-205ENST00000522456 PRIM1P49642 420 aaKnown RBP29.72■■■□□ 2.35
HOXA3-205ENST00000522456 USHBP1Q8N6Y0 703 aa29.71■■■□□ 2.35
HOXA3-205ENST00000522456 NPC1L1Q9UHC9 1359 aa29.71■■■□□ 2.35
HOXA3-205ENST00000522456 UTRNP46939 3433 aa29.7■■■□□ 2.35
HOXA3-205ENST00000522456 LY75O60449 1722 aa29.68■■■□□ 2.34
HOXA3-205ENST00000522456 MAP3K5Q99683 1374 aa29.68■■■□□ 2.34
HOXA3-205ENST00000522456 RAPGEF4Q8WZA2 1011 aa29.68■■■□□ 2.34
HOXA3-205ENST00000522456 EIF4A2Q14240 407 aaKnown RBP29.66■■■□□ 2.34
HOXA3-205ENST00000522456 SLC16A10Q8TF71 515 aa29.66■■■□□ 2.34
HOXA3-205ENST00000522456 PNPLA7Q6ZV29 1317 aa29.66■■■□□ 2.34
HOXA3-205ENST00000522456 TUBGCP6Q96RT7 1819 aa29.66■■■□□ 2.34
HOXA3-205ENST00000522456 KCNQ4P56696 695 aa29.65■■■□□ 2.34
HOXA3-205ENST00000522456 TFCP2L1Q9NZI6 479 aa29.64■■■□□ 2.34
HOXA3-205ENST00000522456 NCAPD2Q15021 1401 aa29.63■■■□□ 2.33
HOXA3-205ENST00000522456 TATP17735 454 aaPredicted RBP29.63■■■□□ 2.33
HOXA3-205ENST00000522456 MTHFSP49914 203 aa29.63■■■□□ 2.33
HOXA3-205ENST00000522456 EYA1Q99502 592 aa29.63■■■□□ 2.33
HOXA3-205ENST00000522456 COL24A1Q17RW2 1714 aa29.62■■■□□ 2.33
HOXA3-205ENST00000522456 DDX10Q13206 875 aaKnown RBP29.61■■■□□ 2.33
HOXA3-205ENST00000522456 CCNL1Q9UK58 526 aaPredicted RBP29.61■■■□□ 2.33
HOXA3-205ENST00000522456 POLD1P28340 1107 aa29.6■■■□□ 2.33
HOXA3-205ENST00000522456 PCDH11XQ9BZA7 1347 aa29.57■■■□□ 2.32
HOXA3-205ENST00000522456 PCDH11YQ9BZA8 1340 aa29.57■■■□□ 2.32
HOXA3-205ENST00000522456 KLHL34Q8N239 644 aa29.56■■■□□ 2.32
HOXA3-205ENST00000522456 ZNF784Q8NCA9 323 aaPredicted RBP29.56■■■□□ 2.32
HOXA3-205ENST00000522456 CHD4Q14839 1912 aa29.55■■■□□ 2.32
HOXA3-205ENST00000522456 PKD1L3Q7Z443 1732 aa29.54■■■□□ 2.32
HOXA3-205ENST00000522456 PLEKHG2Q9H7P9 1386 aa29.53■■■□□ 2.32
HOXA3-205ENST00000522456 IGSF1Q8N6C5 1336 aa29.52■■■□□ 2.32
HOXA3-205ENST00000522456 IL13P35225 146 aa29.52■■■□□ 2.32
HOXA3-205ENST00000522456 C5P01031 1676 aa29.51■■■□□ 2.31
HOXA3-205ENST00000522456 GPR162Q16538 588 aa29.51■■■□□ 2.31
HOXA3-205ENST00000522456 MSH5O43196 834 aa29.49■■■□□ 2.31
HOXA3-205ENST00000522456 DIAPH1O60610 1272 aaKnown RBP29.49■■■□□ 2.31
HOXA3-205ENST00000522456 SPG7Q9UQ90 795 aa29.49■■■□□ 2.31
HOXA3-205ENST00000522456 CYP27B1O15528 508 aa29.48■■■□□ 2.31
HOXA3-205ENST00000522456 PPP2R1AP30153 589 aa29.48■■■□□ 2.31
HOXA3-205ENST00000522456 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.48■■■□□ 2.31
HOXA3-205ENST00000522456 PALLDQ8WX93 1383 aa29.48■■■□□ 2.31
HOXA3-205ENST00000522456 TOGARAM1Q9Y4F4 1720 aa29.48■■■□□ 2.31
HOXA3-205ENST00000522456 COL23A1Q86Y22 540 aaPredicted RBP29.47■■■□□ 2.31
HOXA3-205ENST00000522456 SULT6B1Q6IMI4 303 aa29.46■■■□□ 2.31
HOXA3-205ENST00000522456 MPRIPQ6WCQ1 1025 aa29.46■■■□□ 2.31
HOXA3-205ENST00000522456 CFAP53Q96M91 514 aa29.45■■■□□ 2.31
HOXA3-205ENST00000522456 GOLGB1Q14789 3259 aaKnown RBP29.45■■■□□ 2.3
HOXA3-205ENST00000522456 AEBP1Q8IUX7 1158 aa29.44■■■□□ 2.3
HOXA3-205ENST00000522456 NLGN2Q8NFZ4 835 aa29.44■■■□□ 2.3
HOXA3-205ENST00000522456 TAF1LQ8IZX4 1826 aa29.43■■■□□ 2.3
HOXA3-205ENST00000522456 ZNF316A6NFI3 1004 aaPredicted RBP29.43■■■□□ 2.3
HOXA3-205ENST00000522456 HMGB2P26583 209 aaKnown RBP29.43■■■□□ 2.3
HOXA3-205ENST00000522456 PELP1Q8IZL8 1130 aaKnown RBP29.43■■■□□ 2.3
HOXA3-205ENST00000522456 ITGB4P16144 1822 aa29.43■■■□□ 2.3
HOXA3-205ENST00000522456 MSL1Q68DK7 614 aa29.41■■■□□ 2.3
HOXA3-205ENST00000522456 SMARCC1Q92922 1105 aaPredicted RBP29.4■■■□□ 2.3
HOXA3-205ENST00000522456 U2SURPO15042 1029 aaKnown RBP29.39■■■□□ 2.3
HOXA3-205ENST00000522456 FLAD1Q8NFF5 587 aa29.39■■■□□ 2.3
HOXA3-205ENST00000522456 C4BP0C0L5 1744 aa29.39■■■□□ 2.3
HOXA3-205ENST00000522456 HMOX1P09601 288 aa29.38■■■□□ 2.29
HOXA3-205ENST00000522456 NKX1-1Q15270 411 aaPredicted RBP29.38■■■□□ 2.29
HOXA3-205ENST00000522456 PLEKHO1Q53GL0 409 aaPredicted RBP29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms