RNA–Protein interactions for RNA: ENST00000522321.5

SPIDR-219, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 760 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-219ENST00000522321 IL2RBP14784 551 aa16.18■□□□□ 0.18
SPIDR-219ENST00000522321 LMOD3Q0VAK6 560 aa16.18■□□□□ 0.18
SPIDR-219ENST00000522321 VPS72Q15906 364 aa16.18■□□□□ 0.18
SPIDR-219ENST00000522321 AMOTQ4VCS5 1084 aa16.18■□□□□ 0.18
SPIDR-219ENST00000522321 BCL9LQ86UU0 1499 aa16.17■□□□□ 0.18
SPIDR-219ENST00000522321 PLEKHG2Q9H7P9 1386 aa16.17■□□□□ 0.18
SPIDR-219ENST00000522321 NFE2L2Q16236 605 aa16.17■□□□□ 0.18
SPIDR-219ENST00000522321 NGEFQ8N5V2 710 aa16.17■□□□□ 0.18
SPIDR-219ENST00000522321 SPG7Q9UQ90 795 aa16.17■□□□□ 0.18
SPIDR-219ENST00000522321 MEGF6O75095 1541 aa16.17■□□□□ 0.18
SPIDR-219ENST00000522321 A0A0G2JS52 829 aa16.16■□□□□ 0.18
SPIDR-219ENST00000522321 TMPOP42166 694 aaKnown RBP16.16■□□□□ 0.18
SPIDR-219ENST00000522321 MYT1Q01538 1121 aa16.16■□□□□ 0.18
SPIDR-219ENST00000522321 C1orf141Q5JVX7 400 aa16.16■□□□□ 0.18
SPIDR-219ENST00000522321 PHACTR3Q96KR7 559 aa16.16■□□□□ 0.18
SPIDR-219ENST00000522321 THRAP3Q9Y2W1 955 aaKnown RBP16.16■□□□□ 0.18
SPIDR-219ENST00000522321 SPATA31A1Q5TZJ5 1347 aa16.16■□□□□ 0.18
SPIDR-219ENST00000522321 SPATA31A5Q5VU36 1347 aa16.16■□□□□ 0.18
SPIDR-219ENST00000522321 ZBED9Q6R2W3 1325 aa16.16■□□□□ 0.18
SPIDR-219ENST00000522321 SPATA31A7Q8IWB4 1347 aa16.16■□□□□ 0.18
SPIDR-219ENST00000522321 OVOS2A0A0G2JMS6 1433 aa16.15■□□□□ 0.18
SPIDR-219ENST00000522321 RIPK4P57078 832 aa16.15■□□□□ 0.18
SPIDR-219ENST00000522321 ZNF530Q6P9A1 599 aaPredicted RBP16.15■□□□□ 0.18
SPIDR-219ENST00000522321 RTF1Q92541 710 aaKnown RBP16.15■□□□□ 0.18
SPIDR-219ENST00000522321 CDCA7Q9BWT1 371 aaPredicted RBP16.15■□□□□ 0.18
SPIDR-219ENST00000522321 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.14■□□□□ 0.17
SPIDR-219ENST00000522321 ATRNO75882 1429 aa16.14■□□□□ 0.17
SPIDR-219ENST00000522321 MTHFSDQ2M296 383 aaKnown RBP16.14■□□□□ 0.17
SPIDR-219ENST00000522321 CCDC125Q86Z20 511 aa16.14■□□□□ 0.17
SPIDR-219ENST00000522321 GJD4Q96KN9 370 aaPredicted RBP16.14■□□□□ 0.17
SPIDR-219ENST00000522321 PARP4Q9UKK3 1724 aaKnown RBP16.14■□□□□ 0.17
SPIDR-219ENST00000522321 RGPD2P0DJD1 1756 aa16.13■□□□□ 0.17
SPIDR-219ENST00000522321 PCDH11XQ9BZA7 1347 aa16.13■□□□□ 0.17
SPIDR-219ENST00000522321 PCDH11YQ9BZA8 1340 aa16.13■□□□□ 0.17
SPIDR-219ENST00000522321 MAP3K5Q99683 1374 aa16.13■□□□□ 0.17
SPIDR-219ENST00000522321 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.12■□□□□ 0.171e-8■■■□□ 18.2
SPIDR-219ENST00000522321 CALD1Q05682 793 aaKnown RBP16.11■□□□□ 0.17
SPIDR-219ENST00000522321 SF3B2Q13435 895 aaKnown RBP16.11■□□□□ 0.17
SPIDR-219ENST00000522321 BARGINQ6ZT62 677 aa16.11■□□□□ 0.17
SPIDR-219ENST00000522321 ZCRB1Q8TBF4 217 aaKnown RBP16.11■□□□□ 0.17
SPIDR-219ENST00000522321 DISP2A7MBM2 1401 aa16.11■□□□□ 0.17
SPIDR-219ENST00000522321 GNAT3A8MTJ3 354 aa16.1■□□□□ 0.17
SPIDR-219ENST00000522321 FAM98CQ17RN3 349 aaKnown RBP16.1■□□□□ 0.17
SPIDR-219ENST00000522321 CCDC27Q2M243 656 aa16.1■□□□□ 0.17
SPIDR-219ENST00000522321 NCBP3Q53F19 620 aaKnown RBP16.1■□□□□ 0.17
SPIDR-219ENST00000522321 AKAP4Q5JQC9 854 aa16.1■□□□□ 0.17
SPIDR-219ENST00000522321 TNS2Q63HR2 1409 aa16.1■□□□□ 0.17
SPIDR-219ENST00000522321 HSP90AB1P08238 724 aaKnown RBP16.09■□□□□ 0.17
SPIDR-219ENST00000522321 DDB1Q16531 1140 aa16.09■□□□□ 0.17
SPIDR-219ENST00000522321 IFNL2Q8IZJ0 200 aa16.09■□□□□ 0.17
SPIDR-219ENST00000522321 EXOC5O00471 708 aa16.08■□□□□ 0.16
SPIDR-219ENST00000522321 WWC1Q8IX03 1113 aa16.08■□□□□ 0.16
SPIDR-219ENST00000522321 DDX54Q8TDD1 881 aaKnown RBP16.08■□□□□ 0.16
SPIDR-219ENST00000522321 HTATSF1O43719 755 aaKnown RBP16.07■□□□□ 0.16
SPIDR-219ENST00000522321 CENPBP07199 599 aaPredicted RBP16.07■□□□□ 0.16
SPIDR-219ENST00000522321 PKD1L3Q7Z443 1732 aa16.06■□□□□ 0.16
SPIDR-219ENST00000522321 PHKG2P15735 406 aa16.06■□□□□ 0.16
SPIDR-219ENST00000522321 GOLGA2Q08379 1002 aa16.06■□□□□ 0.16
SPIDR-219ENST00000522321 PDE3BQ13370 1112 aa16.06■□□□□ 0.16
SPIDR-219ENST00000522321 TRIM35Q9UPQ4 493 aa16.06■□□□□ 0.16
SPIDR-219ENST00000522321 WNK3Q9BYP7 1800 aa16.05■□□□□ 0.16
SPIDR-219ENST00000522321 MCM10Q7L590 875 aa16.05■□□□□ 0.16
SPIDR-219ENST00000522321 WDR63Q8IWG1 891 aa16.05■□□□□ 0.16
SPIDR-219ENST00000522321 GLI3P10071 1580 aa16.04■□□□□ 0.16
SPIDR-219ENST00000522321 TEFQ10587 303 aa16.04■□□□□ 0.16
SPIDR-219ENST00000522321 DCTN1Q14203 1278 aa16.04■□□□□ 0.16
SPIDR-219ENST00000522321 MPRIPQ6WCQ1 1025 aa16.04■□□□□ 0.16
SPIDR-219ENST00000522321 LAS1LQ9Y4W2 734 aaKnown RBP16.04■□□□□ 0.16
SPIDR-219ENST00000522321 LRRC37A3O60309 1634 aa16.04■□□□□ 0.16
SPIDR-219ENST00000522321 E9PSI1 815 aa16.03■□□□□ 0.16
SPIDR-219ENST00000522321 SEPT12Q8IYM1 358 aa16.03■□□□□ 0.16
SPIDR-219ENST00000522321 DCAF5Q96JK2 942 aa16.03■□□□□ 0.16
SPIDR-219ENST00000522321 THUMPD2Q9BTF0 503 aaKnown RBP16.03■□□□□ 0.16
SPIDR-219ENST00000522321 MYH16Q9H6N6 1097 aa16.03■□□□□ 0.16
SPIDR-219ENST00000522321 ZNF521Q96K83 1311 aa16.02■□□□□ 0.16
SPIDR-219ENST00000522321 CYP27B1O15528 508 aa16.02■□□□□ 0.16
SPIDR-219ENST00000522321 IL16Q14005 1332 aa16.01■□□□□ 0.15
SPIDR-219ENST00000522321 RNMTO43148 476 aaKnown RBP16.01■□□□□ 0.15
SPIDR-219ENST00000522321 DEFB132Q7Z7B7 95 aa16.01■□□□□ 0.15
SPIDR-219ENST00000522321 THSD7AQ9UPZ6 1657 aa16■□□□□ 0.15
SPIDR-219ENST00000522321 GNAI1P63096 354 aa16■□□□□ 0.15
SPIDR-219ENST00000522321 IFT57Q9NWB7 429 aa16■□□□□ 0.15
SPIDR-219ENST00000522321 CABP4P57796 275 aa15.99■□□□□ 0.15
SPIDR-219ENST00000522321 KDM6AO15550 1401 aaPredicted RBP15.99■□□□□ 0.15
SPIDR-219ENST00000522321 CEMIPQ8WUJ3 1361 aa15.99■□□□□ 0.15
SPIDR-219ENST00000522321 KRT27Q7Z3Y8 459 aa15.98■□□□□ 0.15
SPIDR-219ENST00000522321 IL17REQ8NFR9 667 aa15.98■□□□□ 0.15
SPIDR-219ENST00000522321 CDCA7LQ96GN5 454 aa15.98■□□□□ 0.15
SPIDR-219ENST00000522321 TSPYL4Q9UJ04 414 aa15.98■□□□□ 0.15
SPIDR-219ENST00000522321 CFAP44Q96MT7 982 aa15.97■□□□□ 0.15
SPIDR-219ENST00000522321 LGR6Q9HBX8 967 aa15.97■□□□□ 0.15
SPIDR-219ENST00000522321 FANCIQ9NVI1 1328 aa15.96■□□□□ 0.15
SPIDR-219ENST00000522321 SLFN5Q08AF3 891 aa15.96■□□□□ 0.15
SPIDR-219ENST00000522321 NKX1-1Q15270 411 aaPredicted RBP15.96■□□□□ 0.15
SPIDR-219ENST00000522321 TAF7Q15545 349 aaPredicted RBP15.96■□□□□ 0.15
SPIDR-219ENST00000522321 SYTL4Q96C24 671 aaPredicted RBP15.96■□□□□ 0.15
SPIDR-219ENST00000522321 SLC52A2Q9HAB3 445 aa15.96■□□□□ 0.15
SPIDR-219ENST00000522321 TMOD3Q9NYL9 352 aa15.96■□□□□ 0.15
SPIDR-219ENST00000522321 SHANK3Q9BYB0 1731 aa15.95■□□□□ 0.14
SPIDR-219ENST00000522321 BTBD11A6QL63 1104 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms