RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 KNSTRNQ9Y448 316 aa9.26□□□□□ -0.93
SPIDR-218ENST00000522222 MAP2P11137 1827 aaKnown RBP9.26□□□□□ -0.93
SPIDR-218ENST00000522222 NCAPD2Q15021 1401 aa9.25□□□□□ -0.93
SPIDR-218ENST00000522222 PPM1GO15355 546 aaPredicted RBP9.25□□□□□ -0.93
SPIDR-218ENST00000522222 IL2RBP14784 551 aa9.25□□□□□ -0.93
SPIDR-218ENST00000522222 SF3B2Q13435 895 aaKnown RBP9.25□□□□□ -0.93
SPIDR-218ENST00000522222 USHBP1Q8N6Y0 703 aa9.25□□□□□ -0.93
SPIDR-218ENST00000522222 POLKQ9UBT6 870 aa9.25□□□□□ -0.93
SPIDR-218ENST00000522222 SBF2Q86WG5 1849 aa9.25□□□□□ -0.93
SPIDR-218ENST00000522222 BCL9O00512 1426 aa9.24□□□□□ -0.93
SPIDR-218ENST00000522222 NHSQ6T4R5 1651 aa9.24□□□□□ -0.93
SPIDR-218ENST00000522222 TRIM37O94972 964 aa9.24□□□□□ -0.93
SPIDR-218ENST00000522222 MORC1Q86VD1 984 aa9.24□□□□□ -0.93
SPIDR-218ENST00000522222 MARCH10Q8NA82 808 aaPredicted RBP9.24□□□□□ -0.93
SPIDR-218ENST00000522222 RREB1Q92766 1687 aa9.23□□□□□ -0.93
SPIDR-218ENST00000522222 BAG6P46379 1132 aa9.23□□□□□ -0.93
SPIDR-218ENST00000522222 NBPF6Q5VWK0 638 aa9.23□□□□□ -0.93
SPIDR-218ENST00000522222 NBPF4Q96M43 638 aa9.23□□□□□ -0.93
SPIDR-218ENST00000522222 NPC1L1Q9UHC9 1359 aa9.23□□□□□ -0.93
SPIDR-218ENST00000522222 PKD1L3Q7Z443 1732 aa9.22□□□□□ -0.93
SPIDR-218ENST00000522222 DOT1LQ8TEK3 1739 aa9.22□□□□□ -0.93
SPIDR-218ENST00000522222 RGPD3A6NKT7 1758 aaPredicted RBP9.22□□□□□ -0.93
SPIDR-218ENST00000522222 RGPD4Q7Z3J3 1758 aa9.22□□□□□ -0.93
SPIDR-218ENST00000522222 EXOC5O00471 708 aa9.22□□□□□ -0.93
SPIDR-218ENST00000522222 PER1O15534 1290 aaPredicted RBP9.22□□□□□ -0.93
SPIDR-218ENST00000522222 CC2D1BQ5T0F9 858 aaKnown RBP9.22□□□□□ -0.93
SPIDR-218ENST00000522222 NUP188Q5SRE5 1749 aa9.22□□□□□ -0.93
SPIDR-218ENST00000522222 CCER2I3L3R5 266 aa9.21□□□□□ -0.94
SPIDR-218ENST00000522222 EN1Q05925 392 aaPredicted RBP9.21□□□□□ -0.94
SPIDR-218ENST00000522222 EIF4A2Q14240 407 aaKnown RBP9.21□□□□□ -0.94
SPIDR-218ENST00000522222 APBA3O96018 575 aa9.2□□□□□ -0.94
SPIDR-218ENST00000522222 PTF1AQ7RTS3 328 aa9.2□□□□□ -0.94
SPIDR-218ENST00000522222 RAPGEF4Q8WZA2 1011 aa9.2□□□□□ -0.94
SPIDR-218ENST00000522222 PARD3Q8TEW0 1356 aa9.2□□□□□ -0.94
SPIDR-218ENST00000522222 BTAF1O14981 1849 aa9.19□□□□□ -0.94
SPIDR-218ENST00000522222 TATP17735 454 aaPredicted RBP9.19□□□□□ -0.94
SPIDR-218ENST00000522222 CNGB1Q14028 1251 aaPredicted RBP9.19□□□□□ -0.94
SPIDR-218ENST00000522222 EYA1Q99502 592 aa9.19□□□□□ -0.94
SPIDR-218ENST00000522222 IGSF1Q8N6C5 1336 aa9.19□□□□□ -0.94
SPIDR-218ENST00000522222 COL3A1P02461 1466 aaPredicted RBP9.19□□□□□ -0.94
SPIDR-218ENST00000522222 TOGARAM1Q9Y4F4 1720 aa9.19□□□□□ -0.94
SPIDR-218ENST00000522222 EZH2Q15910 746 aaKnown RBP9.18□□□□□ -0.94
SPIDR-218ENST00000522222 ZCRB1Q8TBF4 217 aaKnown RBP9.18□□□□□ -0.94
SPIDR-218ENST00000522222 DDX54Q8TDD1 881 aaKnown RBP9.18□□□□□ -0.94
SPIDR-218ENST00000522222 ACSBG1Q96GR2 724 aa9.18□□□□□ -0.94
SPIDR-218ENST00000522222 CAMKK2Q96RR4 588 aa9.18□□□□□ -0.94
SPIDR-218ENST00000522222 BCL11BQ9C0K0 894 aaPredicted RBP9.18□□□□□ -0.94
SPIDR-218ENST00000522222 PCDH11XQ9BZA7 1347 aa9.17□□□□□ -0.94
SPIDR-218ENST00000522222 PCDH11YQ9BZA8 1340 aa9.17□□□□□ -0.94
SPIDR-218ENST00000522222 KCNQ2O43526 872 aa9.17□□□□□ -0.94
SPIDR-218ENST00000522222 PLEKHG2Q9H7P9 1386 aa9.16□□□□□ -0.94
SPIDR-218ENST00000522222 ANP32CO43423 234 aa9.16□□□□□ -0.94
SPIDR-218ENST00000522222 CAPN15O75808 1086 aa9.16□□□□□ -0.94
SPIDR-218ENST00000522222 MTHFSP49914 203 aa9.16□□□□□ -0.94
SPIDR-218ENST00000522222 CHRDL2Q6WN34 429 aa9.16□□□□□ -0.94
SPIDR-218ENST00000522222 AEBP1Q8IUX7 1158 aa9.16□□□□□ -0.94
SPIDR-218ENST00000522222 KDRP35968 1356 aa9.15□□□□□ -0.94
SPIDR-218ENST00000522222 CYP27B1O15528 508 aa9.15□□□□□ -0.94
SPIDR-218ENST00000522222 IL13P35225 146 aa9.15□□□□□ -0.94
SPIDR-218ENST00000522222 PAPPAQ13219 1627 aa9.15□□□□□ -0.94
SPIDR-218ENST00000522222 PSDA5PKW4 1024 aaPredicted RBP9.14□□□□□ -0.95
SPIDR-218ENST00000522222 KAT6BQ8WYB5 2073 aa9.14□□□□□ -0.95
SPIDR-218ENST00000522222 PLSCR1O15162 318 aa9.13□□□□□ -0.95
SPIDR-218ENST00000522222 PRIM1P49642 420 aaKnown RBP9.13□□□□□ -0.95
SPIDR-218ENST00000522222 SYTL4Q96C24 671 aaPredicted RBP9.13□□□□□ -0.95
SPIDR-218ENST00000522222 ANO8Q9HCE9 1232 aaPredicted RBP9.13□□□□□ -0.95
SPIDR-218ENST00000522222 PLSCR2Q9NRY7 297 aa9.13□□□□□ -0.95
SPIDR-218ENST00000522222 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.13□□□□□ -0.953e-8■■■■□ 21.8
SPIDR-218ENST00000522222 SPG7Q9UQ90 795 aa9.13□□□□□ -0.95
SPIDR-218ENST00000522222 SUPT16HQ9Y5B9 1047 aaKnown RBP9.13□□□□□ -0.95
SPIDR-218ENST00000522222 LY75O60449 1722 aa9.12□□□□□ -0.95
SPIDR-218ENST00000522222 PPP2R1AP30153 589 aa9.12□□□□□ -0.95
SPIDR-218ENST00000522222 R3HDM1Q15032 1099 aaKnown RBP9.12□□□□□ -0.95
SPIDR-218ENST00000522222 TXNRD1Q16881 649 aa9.12□□□□□ -0.95
SPIDR-218ENST00000522222 SULT6B1Q6IMI4 303 aa9.12□□□□□ -0.95
SPIDR-218ENST00000522222 SPINK5Q9NQ38 1064 aaPredicted RBP9.12□□□□□ -0.95
SPIDR-218ENST00000522222 KDM6AO15550 1401 aaPredicted RBP9.12□□□□□ -0.95
SPIDR-218ENST00000522222 LRP5O75197 1615 aa9.12□□□□□ -0.95
SPIDR-218ENST00000522222 ITGB4P16144 1822 aa9.12□□□□□ -0.95
SPIDR-218ENST00000522222 DIAPH1O60610 1272 aaKnown RBP9.11□□□□□ -0.95
SPIDR-218ENST00000522222 PHKG2P15735 406 aa9.11□□□□□ -0.95
SPIDR-218ENST00000522222 ZNF530Q6P9A1 599 aaPredicted RBP9.11□□□□□ -0.95
SPIDR-218ENST00000522222 PROM2Q8N271 834 aa9.11□□□□□ -0.95
SPIDR-218ENST00000522222 CASZ1Q86V15 1759 aa9.11□□□□□ -0.95
SPIDR-218ENST00000522222 MYCNP04198 464 aaPredicted RBP9.1□□□□□ -0.95
SPIDR-218ENST00000522222 NEFLP07196 543 aa9.1□□□□□ -0.95
SPIDR-218ENST00000522222 HMOX1P09601 288 aa9.1□□□□□ -0.95
SPIDR-218ENST00000522222 DDX10Q13206 875 aaKnown RBP9.1□□□□□ -0.95
SPIDR-218ENST00000522222 NKX1-1Q15270 411 aaPredicted RBP9.1□□□□□ -0.95
SPIDR-218ENST00000522222 IFNL2Q8IZJ0 200 aa9.1□□□□□ -0.95
SPIDR-218ENST00000522222 U2SURPO15042 1029 aaKnown RBP9.09□□□□□ -0.95
SPIDR-218ENST00000522222 PLEKHO1Q53GL0 409 aaPredicted RBP9.09□□□□□ -0.95
SPIDR-218ENST00000522222 NBPF14Q5TI25 921 aa9.09□□□□□ -0.95
SPIDR-218ENST00000522222 CFAP53Q96M91 514 aa9.09□□□□□ -0.95
SPIDR-218ENST00000522222 PALLDQ8WX93 1383 aa9.09□□□□□ -0.95
SPIDR-218ENST00000522222 MRC1P22897 1456 aa9.08□□□□□ -0.96
SPIDR-218ENST00000522222 TUBGCP6Q96RT7 1819 aa9.08□□□□□ -0.96
SPIDR-218ENST00000522222 C5P01031 1676 aa9.08□□□□□ -0.96
SPIDR-218ENST00000522222 AMOTQ4VCS5 1084 aa9.08□□□□□ -0.96
SPIDR-218ENST00000522222 MPRIPQ6WCQ1 1025 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms