RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 NAT10Q9H0A0 1025 aaKnown RBP16.53■□□□□ 0.24
SYNPO-205ENST00000522122 ERICH2A1L162 156 aa16.52■□□□□ 0.24
SYNPO-205ENST00000522122 TRMT2AQ8IZ69 625 aaKnown RBP16.52■□□□□ 0.24
SYNPO-205ENST00000522122 TRIM5Q9C035 493 aa16.52■□□□□ 0.24
SYNPO-205ENST00000522122 ZNF521Q96K83 1311 aa16.52■□□□□ 0.24
SYNPO-205ENST00000522122 TNNQ9UQP3 1299 aa16.52■□□□□ 0.24
SYNPO-205ENST00000522122 XRCC6P12956 609 aaKnown RBP eCLIP16.52■□□□□ 0.23
SYNPO-205ENST00000522122 SRCIN1Q9C0H9 1055 aa16.52■□□□□ 0.23
SYNPO-205ENST00000522122 ZSCAN30Q86W11 494 aa16.52■□□□□ 0.23
SYNPO-205ENST00000522122 WDR33Q9C0J8 1336 aaKnown RBP16.51■□□□□ 0.23
SYNPO-205ENST00000522122 TBC1D9Q6ZT07 1266 aa16.51■□□□□ 0.23
SYNPO-205ENST00000522122 TTC37Q6PGP7 1564 aa16.51■□□□□ 0.23
SYNPO-205ENST00000522122 WDR7Q9Y4E6 1490 aa16.51■□□□□ 0.23
SYNPO-205ENST00000522122 CCDC47Q96A33 483 aaKnown RBP16.51■□□□□ 0.23
SYNPO-205ENST00000522122 CCDC70Q6NSX1 233 aa16.5■□□□□ 0.23
SYNPO-205ENST00000522122 TRPM2O94759 1503 aa16.5■□□□□ 0.23
SYNPO-205ENST00000522122 IQGAP3Q86VI3 1631 aa16.5■□□□□ 0.23
SYNPO-205ENST00000522122 SSFA2P28290 1259 aa16.5■□□□□ 0.23
SYNPO-205ENST00000522122 CYP46A1Q9Y6A2 500 aa16.5■□□□□ 0.23
SYNPO-205ENST00000522122 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.5■□□□□ 0.23
SYNPO-205ENST00000522122 NCBP3Q53F19 620 aaKnown RBP16.5■□□□□ 0.23
SYNPO-205ENST00000522122 VPS53Q5VIR6 699 aa16.5■□□□□ 0.23
SYNPO-205ENST00000522122 VPS37DQ86XT2 251 aa16.5■□□□□ 0.23
SYNPO-205ENST00000522122 AMOTL1Q8IY63 956 aa16.5■□□□□ 0.23
SYNPO-205ENST00000522122 SYTL4Q96C24 671 aaPredicted RBP16.5■□□□□ 0.23
SYNPO-205ENST00000522122 KINO60870 393 aaKnown RBP16.49■□□□□ 0.23
SYNPO-205ENST00000522122 CLCN1P35523 988 aa16.49■□□□□ 0.23
SYNPO-205ENST00000522122 ARHGAP45Q92619 1136 aa16.49■□□□□ 0.23
SYNPO-205ENST00000522122 RRS1Q15050 365 aaKnown RBP16.49■□□□□ 0.23
SYNPO-205ENST00000522122 CEP89Q96ST8 783 aa16.49■□□□□ 0.23
SYNPO-205ENST00000522122 UNC13BO14795 1591 aa16.49■□□□□ 0.23
SYNPO-205ENST00000522122 HMGN5P82970 282 aaKnown RBP16.48■□□□□ 0.23
SYNPO-205ENST00000522122 NOL10Q9BSC4 688 aaKnown RBP16.48■□□□□ 0.23
SYNPO-205ENST00000522122 MNS1Q8NEH6 495 aa16.48■□□□□ 0.23
SYNPO-205ENST00000522122 DNAJC2Q99543 621 aaKnown RBP16.48■□□□□ 0.23
SYNPO-205ENST00000522122 LAMC1P11047 1609 aa16.48■□□□□ 0.23
SYNPO-205ENST00000522122 PCMTD1Q96MG8 357 aaPredicted RBP16.48■□□□□ 0.23
SYNPO-205ENST00000522122 DMRT2Q9Y5R5 561 aa16.48■□□□□ 0.23
SYNPO-205ENST00000522122 ATP7AQ04656 1500 aa16.48■□□□□ 0.23
SYNPO-205ENST00000522122 RAPGEF3O95398 923 aa16.48■□□□□ 0.23
SYNPO-205ENST00000522122 PLXNC1O60486 1568 aa16.47■□□□□ 0.23
SYNPO-205ENST00000522122 TEX35Q5T0J7 233 aa16.47■□□□□ 0.23
SYNPO-205ENST00000522122 SMC5Q8IY18 1101 aa16.47■□□□□ 0.23
SYNPO-205ENST00000522122 ATF3P18847 181 aa16.47■□□□□ 0.23
SYNPO-205ENST00000522122 AEBP1Q8IUX7 1158 aa16.47■□□□□ 0.23
SYNPO-205ENST00000522122 THUMPD2Q9BTF0 503 aaKnown RBP16.47■□□□□ 0.23
SYNPO-205ENST00000522122 ARGLU1Q9NWB6 273 aaPredicted RBP16.47■□□□□ 0.23
SYNPO-205ENST00000522122 CCDC61Q9Y6R9 512 aa16.47■□□□□ 0.23
SYNPO-205ENST00000522122 CD109Q6YHK3 1445 aa16.47■□□□□ 0.23
SYNPO-205ENST00000522122 ATP10AO60312 1499 aa16.46■□□□□ 0.23
SYNPO-205ENST00000522122 OLFM4Q6UX06 510 aa16.46■□□□□ 0.23
SYNPO-205ENST00000522122 SRGAP3O43295 1099 aa16.45■□□□□ 0.22
SYNPO-205ENST00000522122 ANKRD1Q15327 319 aa16.45■□□□□ 0.22
SYNPO-205ENST00000522122 KLHL40Q2TBA0 621 aa16.45■□□□□ 0.22
SYNPO-205ENST00000522122 ZNF518AQ6AHZ1 1483 aa16.45■□□□□ 0.22
SYNPO-205ENST00000522122 CCDC192P0DO97 292 aa16.45■□□□□ 0.22
SYNPO-205ENST00000522122 ESCO1Q5FWF5 840 aa16.45■□□□□ 0.22
SYNPO-205ENST00000522122 SHROOM2Q13796 1616 aa16.45■□□□□ 0.22
SYNPO-205ENST00000522122 ZFYVE9O95405 1425 aa16.44■□□□□ 0.22
SYNPO-205ENST00000522122 KRT85P78386 507 aa16.44■□□□□ 0.22
SYNPO-205ENST00000522122 PLA2R1Q13018 1463 aa16.44■□□□□ 0.22
SYNPO-205ENST00000522122 DHX16O60231 1041 aaKnown RBP16.44■□□□□ 0.22
SYNPO-205ENST00000522122 RAB3GAP1Q15042 981 aa16.44■□□□□ 0.22
SYNPO-205ENST00000522122 ZNF530Q6P9A1 599 aaPredicted RBP16.44■□□□□ 0.22
SYNPO-205ENST00000522122 IL1RAPL2Q9NP60 686 aa16.44■□□□□ 0.22
SYNPO-205ENST00000522122 ZBTB40Q9NUA8 1239 aa16.44■□□□□ 0.22
SYNPO-205ENST00000522122 PTPRTO14522 1441 aa16.44■□□□□ 0.22
SYNPO-205ENST00000522122 CLASP1Q7Z460 1538 aa16.44■□□□□ 0.22
SYNPO-205ENST00000522122 BAG4O95429 457 aaKnown RBP16.44■□□□□ 0.22
SYNPO-205ENST00000522122 TTC22Q5TAA0 569 aa16.44■□□□□ 0.22
SYNPO-205ENST00000522122 PDE4CQ08493 712 aa16.43■□□□□ 0.22
SYNPO-205ENST00000522122 ZNF396Q96N95 335 aaPredicted RBP16.43■□□□□ 0.22
SYNPO-205ENST00000522122 LARP1BQ659C4 914 aaKnown RBP16.43■□□□□ 0.22
SYNPO-205ENST00000522122 MAP4K4O95819 1239 aaPredicted RBP16.43■□□□□ 0.22
SYNPO-205ENST00000522122 MRPL50Q8N5N7 158 aaKnown RBP16.43■□□□□ 0.22
SYNPO-205ENST00000522122 UBE2Q2Q8WVN8 375 aa16.43■□□□□ 0.22
SYNPO-205ENST00000522122 MYOM2P54296 1465 aa16.42■□□□□ 0.22
SYNPO-205ENST00000522122 FMNL2Q96PY5 1086 aa16.42■□□□□ 0.22
SYNPO-205ENST00000522122 PANK2Q9BZ23 570 aa16.42■□□□□ 0.22
SYNPO-205ENST00000522122 MBIPQ9NS73 344 aa16.42■□□□□ 0.22
SYNPO-205ENST00000522122 EXOC6BQ9Y2D4 811 aa16.42■□□□□ 0.22
SYNPO-205ENST00000522122 ERVK-7P63135 1459 aa16.42■□□□□ 0.22
SYNPO-205ENST00000522122 NUDT16Q96DE0 195 aaKnown RBP16.42■□□□□ 0.22
SYNPO-205ENST00000522122 TBC1D2BQ9UPU7 963 aa16.42■□□□□ 0.22
SYNPO-205ENST00000522122 XBP1P17861 261 aa16.42■□□□□ 0.22
SYNPO-205ENST00000522122 STK38Q15208 465 aa16.42■□□□□ 0.22
SYNPO-205ENST00000522122 PTPRCP08575 1304 aa16.41■□□□□ 0.22
SYNPO-205ENST00000522122 RBM25P49756 843 aaKnown RBP16.41■□□□□ 0.22
SYNPO-205ENST00000522122 CEBPZQ03701 1054 aaKnown RBP16.41■□□□□ 0.22
SYNPO-205ENST00000522122 SPC24Q8NBT2 197 aa16.41■□□□□ 0.22
SYNPO-205ENST00000522122 BLOC1S2Q6QNY1 142 aa16.41■□□□□ 0.22
SYNPO-205ENST00000522122 SIL1Q9H173 461 aa16.41■□□□□ 0.22
SYNPO-205ENST00000522122 UQCRHLA0A096LP55 91 aa16.41■□□□□ 0.22
SYNPO-205ENST00000522122 UQCRHP07919 91 aa16.41■□□□□ 0.22
SYNPO-205ENST00000522122 SART3Q15020 963 aaKnown RBP16.41■□□□□ 0.22
SYNPO-205ENST00000522122 TNMDQ9H2S6 317 aa16.41■□□□□ 0.22
SYNPO-205ENST00000522122 SBNO2Q9Y2G9 1366 aa16.41■□□□□ 0.22
SYNPO-205ENST00000522122 PDILTQ8N807 584 aa16.4■□□□□ 0.22
SYNPO-205ENST00000522122 ZSCAN31Q96LW9 406 aaPredicted RBP16.4■□□□□ 0.22
SYNPO-205ENST00000522122 FYB1O15117 783 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms