RNA–Protein interactions for RNA: ENST00000522006.5

LAMA4-219, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-219ENST00000522006 MAP3K11Q16584 847 aa13.38□□□□□ -0.27
LAMA4-219ENST00000522006 CCDC148Q8NFR7 591 aa13.38□□□□□ -0.27
LAMA4-219ENST00000522006 UBAC1Q9BSL1 405 aa13.38□□□□□ -0.27
LAMA4-219ENST00000522006 CASKIN1Q8WXD9 1431 aa13.38□□□□□ -0.27
LAMA4-219ENST00000522006 PDCL2Q8N4E4 241 aa13.38□□□□□ -0.27
LAMA4-219ENST00000522006 EIF5P55010 431 aaKnown RBP13.37□□□□□ -0.27
LAMA4-219ENST00000522006 SLC12A5Q9H2X9 1139 aa13.37□□□□□ -0.27
LAMA4-219ENST00000522006 IGF1RP08069 1367 aa13.37□□□□□ -0.27
LAMA4-219ENST00000522006 ERBINQ96RT1 1412 aa13.37□□□□□ -0.27
LAMA4-219ENST00000522006 TAF4BQ92750 862 aa13.37□□□□□ -0.27
LAMA4-219ENST00000522006 IL1RAPL2Q9NP60 686 aa13.37□□□□□ -0.27
LAMA4-219ENST00000522006 CTNNA3Q9UI47 895 aa13.37□□□□□ -0.27
LAMA4-219ENST00000522006 KRT32Q14532 448 aa13.37□□□□□ -0.27
LAMA4-219ENST00000522006 MPHOSPH8Q99549 860 aa13.37□□□□□ -0.27
LAMA4-219ENST00000522006 BMP2KQ9NSY1 1161 aaPredicted RBP13.37□□□□□ -0.27
LAMA4-219ENST00000522006 JAKMIP3Q5VZ66 844 aa13.37□□□□□ -0.27
LAMA4-219ENST00000522006 ZNF530Q6P9A1 599 aaPredicted RBP13.37□□□□□ -0.27
LAMA4-219ENST00000522006 PIBF1Q8WXW3 757 aa13.37□□□□□ -0.27
LAMA4-219ENST00000522006 WASF1Q92558 559 aa13.37□□□□□ -0.27
LAMA4-219ENST00000522006 SPINK5Q9NQ38 1064 aaPredicted RBP13.37□□□□□ -0.27
LAMA4-219ENST00000522006 TXNDC2Q86VQ3 553 aa13.36□□□□□ -0.27
LAMA4-219ENST00000522006 RRP9O43818 475 aaKnown RBP13.36□□□□□ -0.27
LAMA4-219ENST00000522006 CFAP100Q494V2 611 aa13.36□□□□□ -0.27
LAMA4-219ENST00000522006 ARHGAP29Q52LW3 1261 aa13.36□□□□□ -0.27
LAMA4-219ENST00000522006 DDX11Q96FC9 970 aa13.36□□□□□ -0.27
LAMA4-219ENST00000522006 EZRP15311 586 aaKnown RBP13.36□□□□□ -0.27
LAMA4-219ENST00000522006 CABP1Q9NZU7 370 aa13.36□□□□□ -0.27
LAMA4-219ENST00000522006 USP8P40818 1118 aa13.36□□□□□ -0.27
LAMA4-219ENST00000522006 NUTM1Q86Y26 1132 aa13.36□□□□□ -0.27
LAMA4-219ENST00000522006 MATR3P43243 847 aaKnown RBP eCLIP13.36□□□□□ -0.27
LAMA4-219ENST00000522006 RBM5P52756 815 aaKnown RBP eCLIP13.35□□□□□ -0.27
LAMA4-219ENST00000522006 SPG7Q9UQ90 795 aa13.35□□□□□ -0.27
LAMA4-219ENST00000522006 UBXN4Q92575 508 aa13.35□□□□□ -0.27
LAMA4-219ENST00000522006 CEP131Q9UPN4 1083 aa13.35□□□□□ -0.27
LAMA4-219ENST00000522006 ZNF397Q8NF99 534 aaPredicted RBP13.35□□□□□ -0.27
LAMA4-219ENST00000522006 BTBD11A6QL63 1104 aa13.35□□□□□ -0.27
LAMA4-219ENST00000522006 TAF3Q5VWG9 929 aa13.34□□□□□ -0.27
LAMA4-219ENST00000522006 DDX54Q8TDD1 881 aaKnown RBP13.34□□□□□ -0.27
LAMA4-219ENST00000522006 CASQ1P31415 396 aa13.34□□□□□ -0.27
LAMA4-219ENST00000522006 IMMTQ16891 758 aaKnown RBP13.34□□□□□ -0.27
LAMA4-219ENST00000522006 ZSCAN30Q86W11 494 aa13.34□□□□□ -0.27
LAMA4-219ENST00000522006 RAI14Q9P0K7 980 aa13.34□□□□□ -0.27
LAMA4-219ENST00000522006 TMCO3Q6UWJ1 677 aa13.34□□□□□ -0.27
LAMA4-219ENST00000522006 ZNF76P36508 570 aa13.34□□□□□ -0.27
LAMA4-219ENST00000522006 CCDC83Q8IWF9 413 aa13.34□□□□□ -0.27
LAMA4-219ENST00000522006 INCENPQ9NQS7 918 aa13.34□□□□□ -0.27
LAMA4-219ENST00000522006 SSR1P43307 286 aaKnown RBP13.33□□□□□ -0.28
LAMA4-219ENST00000522006 OSCARQ8IYS5 282 aa13.33□□□□□ -0.28
LAMA4-219ENST00000522006 TMEM57Q8N5G2 664 aa13.33□□□□□ -0.28
LAMA4-219ENST00000522006 HFM1A2PYH4 1435 aa13.33□□□□□ -0.28
LAMA4-219ENST00000522006 KIAA1107Q9UPP5 1409 aa13.33□□□□□ -0.28
LAMA4-219ENST00000522006 ZNF692Q9BU19 519 aaPredicted RBP13.33□□□□□ -0.28
LAMA4-219ENST00000522006 PTPN14Q15678 1187 aa13.32□□□□□ -0.28
LAMA4-219ENST00000522006 TOM1L2Q6ZVM7 507 aa13.32□□□□□ -0.28
LAMA4-219ENST00000522006 CFTRP13569 1480 aa13.32□□□□□ -0.28
LAMA4-219ENST00000522006 ANKRD30BQ9BXX2 1392 aa13.32□□□□□ -0.28
LAMA4-219ENST00000522006 RPAP2Q8IXW5 612 aaPredicted RBP13.32□□□□□ -0.28
LAMA4-219ENST00000522006 CRACR2AQ9BSW2 395 aa13.32□□□□□ -0.28
LAMA4-219ENST00000522006 GBP3Q9H0R5 595 aa13.32□□□□□ -0.28
LAMA4-219ENST00000522006 DESP17661 470 aa13.32□□□□□ -0.28
LAMA4-219ENST00000522006 RRS1Q15050 365 aaKnown RBP13.32□□□□□ -0.28
LAMA4-219ENST00000522006 CCDC183Q5T5S1 534 aa13.32□□□□□ -0.28
LAMA4-219ENST00000522006 PDIA4P13667 645 aaKnown RBP13.31□□□□□ -0.28
LAMA4-219ENST00000522006 USP5P45974 858 aa13.31□□□□□ -0.28
LAMA4-219ENST00000522006 CEP126Q9P2H0 1117 aa13.31□□□□□ -0.28
LAMA4-219ENST00000522006 ZSCAN12O43309 604 aa13.31□□□□□ -0.28
LAMA4-219ENST00000522006 NBPF8Q3BBV2 869 aa13.31□□□□□ -0.28
LAMA4-219ENST00000522006 AIDAQ96BJ3 306 aa13.31□□□□□ -0.28
LAMA4-219ENST00000522006 LRP2BPQ9P2M1 347 aa13.31□□□□□ -0.28
LAMA4-219ENST00000522006 RTEL1-TNFRSF6BF6WH68 1400 aa13.31□□□□□ -0.28
LAMA4-219ENST00000522006 SHTN1A0MZ66 631 aa13.31□□□□□ -0.28
LAMA4-219ENST00000522006 SPA17Q15506 151 aa13.31□□□□□ -0.28
LAMA4-219ENST00000522006 MPHOSPH10O00566 681 aaKnown RBP13.31□□□□□ -0.28
LAMA4-219ENST00000522006 IDH1O75874 414 aaKnown RBP13.31□□□□□ -0.28
LAMA4-219ENST00000522006 NEBLO76041 1014 aa13.31□□□□□ -0.28
LAMA4-219ENST00000522006 SFPQP23246 707 aaKnown RBP eCLIP13.31□□□□□ -0.28
LAMA4-219ENST00000522006 FERMT3Q86UX7 667 aa13.31□□□□□ -0.28
LAMA4-219ENST00000522006 PROSER2Q86WR7 435 aaPredicted RBP13.31□□□□□ -0.28
LAMA4-219ENST00000522006 AFAP1Q8N556 730 aa13.31□□□□□ -0.28
LAMA4-219ENST00000522006 KIF2AO00139 706 aaPredicted RBP13.3□□□□□ -0.28
LAMA4-219ENST00000522006 CBX1P83916 185 aa13.3□□□□□ -0.28
LAMA4-219ENST00000522006 PRPF40BQ6NWY9 871 aaKnown RBP13.3□□□□□ -0.28
LAMA4-219ENST00000522006 SMARCA5O60264 1052 aaPredicted RBP13.3□□□□□ -0.28
LAMA4-219ENST00000522006 ZSCAN29Q8IWY8 852 aaPredicted RBP13.3□□□□□ -0.28
LAMA4-219ENST00000522006 PHF23Q9BUL5 403 aaPredicted RBP13.3□□□□□ -0.28
LAMA4-219ENST00000522006 ERICH3Q5RHP9 1530 aa13.3□□□□□ -0.28
LAMA4-219ENST00000522006 MAP2K1Q02750 393 aaPredicted RBP13.3□□□□□ -0.28
LAMA4-219ENST00000522006 SLC26A8Q96RN1 970 aa13.3□□□□□ -0.28
LAMA4-219ENST00000522006 PRDM10Q9NQV6 1147 aa13.3□□□□□ -0.28
LAMA4-219ENST00000522006 KIF5CO60282 957 aa13.3□□□□□ -0.28
LAMA4-219ENST00000522006 ANO10Q9NW15 660 aa13.3□□□□□ -0.28
LAMA4-219ENST00000522006 EXOC6BQ9Y2D4 811 aa13.3□□□□□ -0.28
LAMA4-219ENST00000522006 C9orf84Q5VXU9 1444 aa13.3□□□□□ -0.28
LAMA4-219ENST00000522006 MX1P20591 662 aa13.29□□□□□ -0.28
LAMA4-219ENST00000522006 SLFN5Q08AF3 891 aa13.29□□□□□ -0.28
LAMA4-219ENST00000522006 EHBP1L1Q8N3D4 1523 aa13.29□□□□□ -0.28
LAMA4-219ENST00000522006 DYDC1Q8WWB3 177 aa13.29□□□□□ -0.28
LAMA4-219ENST00000522006 CCDC113Q9H0I3 377 aa13.29□□□□□ -0.28
LAMA4-219ENST00000522006 MAPK8IP2Q13387 824 aaPredicted RBP13.29□□□□□ -0.28
LAMA4-219ENST00000522006 CCDC85AQ96PX6 553 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms