RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 PNPLA7Q6ZV29 1317 aa13.27□□□□□ -0.29
TRAPPC9-212ENST00000521944 KIF3CO14782 793 aa13.26□□□□□ -0.29
TRAPPC9-212ENST00000521944 AKAP12Q02952 1782 aa13.26□□□□□ -0.29
TRAPPC9-212ENST00000521944 WDR17Q8IZU2 1322 aa13.26□□□□□ -0.29
TRAPPC9-212ENST00000521944 ZNF526Q8TF50 670 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC9-212ENST00000521944 SLC16A10Q8TF71 515 aa13.26□□□□□ -0.29
TRAPPC9-212ENST00000521944 ACSBG1Q96GR2 724 aa13.26□□□□□ -0.29
TRAPPC9-212ENST00000521944 CDCA7Q9BWT1 371 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC9-212ENST00000521944 WNK3Q9BYP7 1800 aa13.26□□□□□ -0.29
TRAPPC9-212ENST00000521944 CCDC61Q9Y6R9 512 aa13.26□□□□□ -0.29
TRAPPC9-212ENST00000521944 ITSN1Q15811 1721 aa13.25□□□□□ -0.29
TRAPPC9-212ENST00000521944 ZBTB7CA1YPR0 619 aa13.25□□□□□ -0.29
TRAPPC9-212ENST00000521944 EXOC5O00471 708 aa13.24□□□□□ -0.29
TRAPPC9-212ENST00000521944 POLD1P28340 1107 aa13.24□□□□□ -0.29
TRAPPC9-212ENST00000521944 CARD10Q9BWT7 1032 aa13.24□□□□□ -0.29
TRAPPC9-212ENST00000521944 CIZ1Q9ULV3 898 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC9-212ENST00000521944 TOPAZ1Q8N9V7 1692 aa13.24□□□□□ -0.29
TRAPPC9-212ENST00000521944 NHSQ6T4R5 1651 aa13.22□□□□□ -0.29
TRAPPC9-212ENST00000521944 ARHGEF28Q8N1W1 1705 aaKnown RBP13.22□□□□□ -0.29
TRAPPC9-212ENST00000521944 USP6P35125 1406 aa13.22□□□□□ -0.29
TRAPPC9-212ENST00000521944 APLP1P51693 650 aa13.21□□□□□ -0.29
TRAPPC9-212ENST00000521944 PRELPP51888 382 aa13.21□□□□□ -0.29
TRAPPC9-212ENST00000521944 KCNQ4P56696 695 aa13.21□□□□□ -0.29
TRAPPC9-212ENST00000521944 SLIT3O75094 1523 aa13.21□□□□□ -0.29
TRAPPC9-212ENST00000521944 ARHGEF25Q86VW2 580 aa13.2□□□□□ -0.3
TRAPPC9-212ENST00000521944 PHF12Q96QT6 1004 aa13.2□□□□□ -0.3
TRAPPC9-212ENST00000521944 BTAF1O14981 1849 aa13.2□□□□□ -0.3
TRAPPC9-212ENST00000521944 QSER1Q2KHR3 1735 aa13.19□□□□□ -0.3
TRAPPC9-212ENST00000521944 TUBGCP6Q96RT7 1819 aa13.19□□□□□ -0.3
TRAPPC9-212ENST00000521944 NLRP6P59044 892 aa13.19□□□□□ -0.3
TRAPPC9-212ENST00000521944 TNS2Q63HR2 1409 aa13.19□□□□□ -0.3
TRAPPC9-212ENST00000521944 RGPD5Q99666 1765 aa13.18□□□□□ -0.3
TRAPPC9-212ENST00000521944 KAT6BQ8WYB5 2073 aa13.18□□□□□ -0.3
TRAPPC9-212ENST00000521944 BRD4O60885 1362 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC9-212ENST00000521944 TFCP2L1Q9NZI6 479 aa13.17□□□□□ -0.3
TRAPPC9-212ENST00000521944 KDM2AQ9Y2K7 1162 aa13.17□□□□□ -0.3
TRAPPC9-212ENST00000521944 CPSF1Q10570 1443 aaKnown RBP13.16□□□□□ -0.3
TRAPPC9-212ENST00000521944 SLC34A2O95436 690 aa13.16□□□□□ -0.3
TRAPPC9-212ENST00000521944 HTRA3P83110 453 aa13.16□□□□□ -0.3
TRAPPC9-212ENST00000521944 COL23A1Q86Y22 540 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC9-212ENST00000521944 JMYQ8N9B5 988 aa13.16□□□□□ -0.3
TRAPPC9-212ENST00000521944 TRPM1Q7Z4N2 1603 aa13.16□□□□□ -0.3
TRAPPC9-212ENST00000521944 PPIP5K1Q6PFW1 1433 aa13.15□□□□□ -0.3
TRAPPC9-212ENST00000521944 GABBR2O75899 941 aa13.15□□□□□ -0.3
TRAPPC9-212ENST00000521944 CSB-PGBD3P0DP91 1061 aa13.15□□□□□ -0.3
TRAPPC9-212ENST00000521944 SLC27A3Q5K4L6 730 aa13.15□□□□□ -0.3
TRAPPC9-212ENST00000521944 ABCC6O95255 1503 aa13.14□□□□□ -0.31
TRAPPC9-212ENST00000521944 TNS4Q8IZW8 715 aa13.14□□□□□ -0.31
TRAPPC9-212ENST00000521944 KIF12Q96FN5 646 aa13.14□□□□□ -0.31
TRAPPC9-212ENST00000521944 CD2APQ9Y5K6 639 aa13.14□□□□□ -0.31
TRAPPC9-212ENST00000521944 CCDC7Q96M83 1385 aa13.13□□□□□ -0.31
TRAPPC9-212ENST00000521944 CHRM1P11229 460 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC9-212ENST00000521944 MSL1Q68DK7 614 aa13.13□□□□□ -0.31
TRAPPC9-212ENST00000521944 DCAF11Q8TEB1 546 aa13.13□□□□□ -0.31
TRAPPC9-212ENST00000521944 CABP2Q9NPB3 220 aa13.13□□□□□ -0.31
TRAPPC9-212ENST00000521944 PIK3C2AO00443 1686 aa13.12□□□□□ -0.31
TRAPPC9-212ENST00000521944 TOMM70O94826 608 aa13.12□□□□□ -0.31
TRAPPC9-212ENST00000521944 KLRG1Q96E93 195 aa13.12□□□□□ -0.31
TRAPPC9-212ENST00000521944 CABP1Q9NZU7 370 aa13.12□□□□□ -0.31
TRAPPC9-212ENST00000521944 PYGBP11216 843 aa13.11□□□□□ -0.31
TRAPPC9-212ENST00000521944 WWC3Q9ULE0 1092 aa13.11□□□□□ -0.31
TRAPPC9-212ENST00000521944 SOX12O15370 315 aa13.1□□□□□ -0.31
TRAPPC9-212ENST00000521944 MAP3K13O43283 966 aa13.09□□□□□ -0.31
TRAPPC9-212ENST00000521944 PCDHB13Q9Y5F0 798 aa13.09□□□□□ -0.31
TRAPPC9-212ENST00000521944 NFAT5O94916 1531 aa13.08□□□□□ -0.31
TRAPPC9-212ENST00000521944 NSD2O96028 1365 aa13.08□□□□□ -0.31
TRAPPC9-212ENST00000521944 IL2RBP14784 551 aa13.08□□□□□ -0.32
TRAPPC9-212ENST00000521944 SRPK2P78362 688 aaKnown RBP13.08□□□□□ -0.32
TRAPPC9-212ENST00000521944 NMRK2Q9NPI5 230 aa13.08□□□□□ -0.32
TRAPPC9-212ENST00000521944 WDR90Q96KV7 1748 aa13.08□□□□□ -0.32
TRAPPC9-212ENST00000521944 PRIM1P49642 420 aaKnown RBP13.07□□□□□ -0.32
TRAPPC9-212ENST00000521944 KCNH5Q8NCM2 988 aa13.07□□□□□ -0.32
TRAPPC9-212ENST00000521944 ERBB3P21860 1342 aa13.07□□□□□ -0.32
TRAPPC9-212ENST00000521944 IGSF1Q8N6C5 1336 aa13.07□□□□□ -0.32
TRAPPC9-212ENST00000521944 MS4A3Q96HJ5 214 aa13.06□□□□□ -0.32
TRAPPC9-212ENST00000521944 NLRP2Q9NX02 1062 aa13.06□□□□□ -0.32
TRAPPC9-212ENST00000521944 TTC21BQ7Z4L5 1316 aa13.06□□□□□ -0.32
TRAPPC9-212ENST00000521944 LY75O60449 1722 aa13.05□□□□□ -0.32
TRAPPC9-212ENST00000521944 NBPF1Q3BBV0 1214 aa13.05□□□□□ -0.32
TRAPPC9-212ENST00000521944 AMIGO3Q86WK7 504 aa13.05□□□□□ -0.32
TRAPPC9-212ENST00000521944 GALR2O43603 387 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC9-212ENST00000521944 ZNF467Q7Z7K2 595 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC9-212ENST00000521944 DDX54Q8TDD1 881 aaKnown RBP13.04□□□□□ -0.32
TRAPPC9-212ENST00000521944 CCNL1Q9UK58 526 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC9-212ENST00000521944 RBM46Q8TBY0 533 aaKnown RBP13.03□□□□□ -0.32
TRAPPC9-212ENST00000521944 STAC3Q96MF2 364 aa13.03□□□□□ -0.32
TRAPPC9-212ENST00000521944 CICQ96RK0 1608 aaPredicted RBP13.02□□□□□ -0.32
TRAPPC9-212ENST00000521944 SMIM5Q71RC9 77 aa13.02□□□□□ -0.33
TRAPPC9-212ENST00000521944 SYTL4Q96C24 671 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC9-212ENST00000521944 ANKRD36BQ8N2N9 1353 aa13.02□□□□□ -0.33
TRAPPC9-212ENST00000521944 DCBLD2Q96PD2 775 aa13.01□□□□□ -0.33
TRAPPC9-212ENST00000521944 ECM2O94769 699 aaPredicted RBP13□□□□□ -0.33
TRAPPC9-212ENST00000521944 ANKRD24Q8TF21 1146 aa12.99□□□□□ -0.33
TRAPPC9-212ENST00000521944 CENPJQ9HC77 1338 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC9-212ENST00000521944 HSPA1AP0DMV8 641 aaKnown RBP12.98□□□□□ -0.33
TRAPPC9-212ENST00000521944 HSPA1BP0DMV9 641 aaKnown RBP12.98□□□□□ -0.33
TRAPPC9-212ENST00000521944 IFNL1Q8IU54 200 aa12.98□□□□□ -0.33
TRAPPC9-212ENST00000521944 TTC21AQ8NDW8 1320 aa12.97□□□□□ -0.33
TRAPPC9-212ENST00000521944 QRICH2Q9H0J4 1663 aa12.97□□□□□ -0.33
TRAPPC9-212ENST00000521944 FSTL1Q12841 308 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms