RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-231	ENST00000521941	EYA1	Q99502	592 aa		11.36	□□□□□ -0.59
CTNNA1-231	ENST00000521941	RREB1	Q92766	1687 aa		11.36	□□□□□ -0.59
CTNNA1-231	ENST00000521941	PKD1L3	Q7Z443	1732 aa		11.35	□□□□□ -0.59
CTNNA1-231	ENST00000521941	ZEB1	P37275	1124 aa	Predicted RBP	11.35	□□□□□ -0.59
CTNNA1-231	ENST00000521941	ZCRB1	Q8TBF4	217 aa	Known RBP	11.35	□□□□□ -0.59
CTNNA1-231	ENST00000521941	BTAF1	O14981	1849 aa		11.35	□□□□□ -0.59
CTNNA1-231	ENST00000521941	NUP188	Q5SRE5	1749 aa		11.35	□□□□□ -0.59
CTNNA1-231	ENST00000521941	KCNQ2	O43526	872 aa		11.34	□□□□□ -0.59
CTNNA1-231	ENST00000521941	MTHFS	P49914	203 aa		11.34	□□□□□ -0.59
CTNNA1-231	ENST00000521941	NCAPD2	Q15021	1401 aa		11.34	□□□□□ -0.59
CTNNA1-231	ENST00000521941	NPC1L1	Q9UHC9	1359 aa		11.33	□□□□□ -0.6
CTNNA1-231	ENST00000521941	SYTL4	Q96C24	671 aa	Predicted RBP	11.33	□□□□□ -0.6
CTNNA1-231	ENST00000521941	BCL9	O00512	1426 aa		11.33	□□□□□ -0.6
CTNNA1-231	ENST00000521941	PCDH11X	Q9BZA7	1347 aa		11.33	□□□□□ -0.6
CTNNA1-231	ENST00000521941	PCDH11Y	Q9BZA8	1340 aa		11.33	□□□□□ -0.6
CTNNA1-231	ENST00000521941	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.32	□□□□□ -0.6
CTNNA1-231	ENST00000521941	RGPD4	Q7Z3J3	1758 aa		11.32	□□□□□ -0.6
CTNNA1-231	ENST00000521941	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.32	□□□□□ -0.6
CTNNA1-231	ENST00000521941	IGSF1	Q8N6C5	1336 aa		11.32	□□□□□ -0.6
CTNNA1-231	ENST00000521941	TOGARAM1	Q9Y4F4	1720 aa		11.32	□□□□□ -0.6
CTNNA1-231	ENST00000521941	PSD	A5PKW4	1024 aa	Predicted RBP	11.31	□□□□□ -0.6
CTNNA1-231	ENST00000521941	DDX10	Q13206	875 aa	Known RBP	11.31	□□□□□ -0.6
CTNNA1-231	ENST00000521941	AEBP1	Q8IUX7	1158 aa		11.31	□□□□□ -0.6
CTNNA1-231	ENST00000521941	CAMKK2	Q96RR4	588 aa		11.31	□□□□□ -0.6
CTNNA1-231	ENST00000521941	SULT6B1	Q6IMI4	303 aa		11.3	□□□□□ -0.6
CTNNA1-231	ENST00000521941	PARD3	Q8TEW0	1356 aa		11.29	□□□□□ -0.6
CTNNA1-231	ENST00000521941	CYP27B1	O15528	508 aa		11.29	□□□□□ -0.6
CTNNA1-231	ENST00000521941	HMOX1	P09601	288 aa		11.29	□□□□□ -0.6
CTNNA1-231	ENST00000521941	IL13	P35225	146 aa		11.29	□□□□□ -0.6
CTNNA1-231	ENST00000521941	PRIM1	P49642	420 aa	Known RBP	11.29	□□□□□ -0.6
CTNNA1-231	ENST00000521941	SPG7	Q9UQ90	795 aa		11.29	□□□□□ -0.6
CTNNA1-231	ENST00000521941	COL3A1	P02461	1466 aa	Predicted RBP	11.29	□□□□□ -0.6
CTNNA1-231	ENST00000521941	ITGB4	P16144	1822 aa		11.28	□□□□□ -0.6
CTNNA1-231	ENST00000521941	U2SURP	O15042	1029 aa	Known RBP	11.28	□□□□□ -0.6
CTNNA1-231	ENST00000521941	DIAPH1	O60610	1272 aa	Known RBP	11.28	□□□□□ -0.6
CTNNA1-231	ENST00000521941	R3HDM1	Q15032	1099 aa	Known RBP	11.28	□□□□□ -0.6
CTNNA1-231	ENST00000521941	PPP2R1A	P30153	589 aa		11.27	□□□□□ -0.61
CTNNA1-231	ENST00000521941	CFAP53	Q96M91	514 aa		11.27	□□□□□ -0.61
CTNNA1-231	ENST00000521941	PLSCR1	O15162	318 aa		11.26	□□□□□ -0.61
CTNNA1-231	ENST00000521941	TXNRD1	Q16881	649 aa		11.26	□□□□□ -0.61
CTNNA1-231	ENST00000521941	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.26	□□□□□ -0.61
CTNNA1-231	ENST00000521941	PHKG2	P15735	406 aa		11.25	□□□□□ -0.61
CTNNA1-231	ENST00000521941	PLEKHO1	Q53GL0	409 aa	Predicted RBP	11.25	□□□□□ -0.61
CTNNA1-231	ENST00000521941	NBPF14	Q5TI25	921 aa		11.25	□□□□□ -0.61
CTNNA1-231	ENST00000521941	MPRIP	Q6WCQ1	1025 aa		11.25	□□□□□ -0.61
CTNNA1-231	ENST00000521941	IFNL2	Q8IZJ0	200 aa		11.25	□□□□□ -0.61
CTNNA1-231	ENST00000521941	LY75	O60449	1722 aa		11.25	□□□□□ -0.61
CTNNA1-231	ENST00000521941	VIRMA	Q69YN4	1812 aa	Known RBP	11.25	□□□□□ -0.61
CTNNA1-231	ENST00000521941	KDR	P35968	1356 aa		11.25	□□□□□ -0.61
CTNNA1-231	ENST00000521941	KCNQ4	P56696	695 aa		11.24	□□□□□ -0.61
CTNNA1-231	ENST00000521941	C1orf141	Q5JVX7	400 aa		11.24	□□□□□ -0.61
CTNNA1-231	ENST00000521941	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.24	□□□□□ -0.61
CTNNA1-231	ENST00000521941	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.24	□□□□□ -0.61
CTNNA1-231	ENST00000521941	PROM2	Q8N271	834 aa		11.23	□□□□□ -0.61
CTNNA1-231	ENST00000521941	PAPPA	Q13219	1627 aa		11.23	□□□□□ -0.61
CTNNA1-231	ENST00000521941	KDM6A	O15550	1401 aa	Predicted RBP	11.22	□□□□□ -0.61
CTNNA1-231	ENST00000521941	AMOT	Q4VCS5	1084 aa		11.22	□□□□□ -0.61
CTNNA1-231	ENST00000521941	PALLD	Q8WX93	1383 aa		11.22	□□□□□ -0.61
CTNNA1-231	ENST00000521941	TMOD3	Q9NYL9	352 aa		11.22	□□□□□ -0.61
CTNNA1-231	ENST00000521941	SCN11A	Q9UI33	1791 aa		11.21	□□□□□ -0.61
CTNNA1-231	ENST00000521941	PLEKHG2	Q9H7P9	1386 aa		11.21	□□□□□ -0.61
CTNNA1-231	ENST00000521941	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.21	□□□□□ -0.61
CTNNA1-231	ENST00000521941	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
CTNNA1-231	ENST00000521941	LRRC4B	Q9NT99	713 aa		11.21	□□□□□ -0.61
CTNNA1-231	ENST00000521941	STK32B	Q9NY57	414 aa		11.21	□□□□□ -0.61
CTNNA1-231	ENST00000521941	CCNL1	Q9UK58	526 aa	Predicted RBP	11.21	□□□□□ -0.61
CTNNA1-231	ENST00000521941	NUDC	Q9Y266	331 aa		11.21	□□□□□ -0.61
CTNNA1-231	ENST00000521941	TUBGCP6	Q96RT7	1819 aa		11.21	□□□□□ -0.62
CTNNA1-231	ENST00000521941	C5	P01031	1676 aa		11.2	□□□□□ -0.62
CTNNA1-231	ENST00000521941	HSP90AB1	P08238	724 aa	Known RBP	11.2	□□□□□ -0.62
CTNNA1-231	ENST00000521941	NKX1-1	Q15270	411 aa	Predicted RBP	11.2	□□□□□ -0.62
CTNNA1-231	ENST00000521941	PIGB	Q92521	554 aa		11.2	□□□□□ -0.62
CTNNA1-231	ENST00000521941	TAF1L	Q8IZX4	1826 aa		11.19	□□□□□ -0.62
CTNNA1-231	ENST00000521941	CASZ1	Q86V15	1759 aa		11.19	□□□□□ -0.62
CTNNA1-231	ENST00000521941	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.19	□□□□□ -0.62
CTNNA1-231	ENST00000521941	PRKAR2B	P31323	418 aa		11.19	□□□□□ -0.62
CTNNA1-231	ENST00000521941	ZNF827	Q17R98	1081 aa		11.19	□□□□□ -0.62
CTNNA1-231	ENST00000521941	MTHFSD	Q2M296	383 aa	Known RBP	11.19	□□□□□ -0.62
CTNNA1-231	ENST00000521941	DCAF5	Q96JK2	942 aa		11.19	□□□□□ -0.62
CTNNA1-231	ENST00000521941	LRP5	O75197	1615 aa		11.18	□□□□□ -0.62
CTNNA1-231	ENST00000521941	CABP4	P57796	275 aa		11.18	□□□□□ -0.62
CTNNA1-231	ENST00000521941	RALBP1	Q15311	655 aa		11.18	□□□□□ -0.62
CTNNA1-231	ENST00000521941	SLC15A2	Q16348	729 aa		11.18	□□□□□ -0.62
CTNNA1-231	ENST00000521941	AKAP4	Q5JQC9	854 aa		11.18	□□□□□ -0.62
CTNNA1-231	ENST00000521941	SLC27A3	Q5K4L6	730 aa		11.18	□□□□□ -0.62
CTNNA1-231	ENST00000521941	RSPH6A	Q9H0K4	717 aa		11.18	□□□□□ -0.62
CTNNA1-231	ENST00000521941	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.17	□□□□□ -0.62
CTNNA1-231	ENST00000521941	SMARCC1	Q92922	1105 aa	Predicted RBP	11.17	□□□□□ -0.62
CTNNA1-231	ENST00000521941	PDGFD	Q9GZP0	370 aa	Predicted RBP	11.17	□□□□□ -0.62
CTNNA1-231	ENST00000521941	ASAP1	Q9ULH1	1129 aa		11.17	□□□□□ -0.62
CTNNA1-231	ENST00000521941	C4B	P0C0L5	1744 aa		11.16	□□□□□ -0.62
CTNNA1-231	ENST00000521941	ERVV-2	B6SEH9	535 aa		11.16	□□□□□ -0.62
CTNNA1-231	ENST00000521941	GAS2L2	Q8NHY3	880 aa		11.16	□□□□□ -0.62
CTNNA1-231	ENST00000521941	RBM42	Q9BTD8	480 aa	Known RBP	11.16	□□□□□ -0.62
CTNNA1-231	ENST00000521941	MAP3K5	Q99683	1374 aa		11.16	□□□□□ -0.62
CTNNA1-231	ENST00000521941	QSER1	Q2KHR3	1735 aa		11.15	□□□□□ -0.62
CTNNA1-231	ENST00000521941	RNMT	O43148	476 aa	Known RBP	11.15	□□□□□ -0.62
CTNNA1-231	ENST00000521941	ZBTB7A	O95365	584 aa		11.15	□□□□□ -0.62
CTNNA1-231	ENST00000521941	NFATC2IP	Q8NCF5	419 aa		11.15	□□□□□ -0.62
CTNNA1-231	ENST00000521941	PHACTR3	Q96KR7	559 aa		11.15	□□□□□ -0.62

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