RNA–Protein interactions for RNA: ENST00000521261.1

MCM4-213, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 2

Gene MCM4, Length 1,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-213ENST00000521261 RASA1P20936 1047 aa8.12□□□□□ -1.11
MCM4-213ENST00000521261 FSHRP23945 695 aa8.12□□□□□ -1.11
MCM4-213ENST00000521261 GRM5P41594 1212 aa8.12□□□□□ -1.11
MCM4-213ENST00000521261 NBPF20Q3BBV1 942 aa8.12□□□□□ -1.11
MCM4-213ENST00000521261 ZNF594Q96JF6 807 aaPredicted RBP8.12□□□□□ -1.11
MCM4-213ENST00000521261 CDK15Q96Q40 435 aa8.12□□□□□ -1.11
MCM4-213ENST00000521261 ATP13A2Q9NQ11 1180 aa8.12□□□□□ -1.11
MCM4-213ENST00000521261 GMPR2Q9P2T1 348 aaKnown RBP8.12□□□□□ -1.11
MCM4-213ENST00000521261 USP17L15C9J2P7 530 aa8.11□□□□□ -1.11
MCM4-213ENST00000521261 USP17L10C9JJH3 530 aa8.11□□□□□ -1.11
MCM4-213ENST00000521261 USP17L13C9JLJ4 530 aa8.11□□□□□ -1.11
MCM4-213ENST00000521261 USP17L12C9JPN9 530 aa8.11□□□□□ -1.11
MCM4-213ENST00000521261 USP17L11C9JVI0 530 aa8.11□□□□□ -1.11
MCM4-213ENST00000521261 USP17L21D6R901 530 aa8.11□□□□□ -1.11
MCM4-213ENST00000521261 USP17L18D6R9N7 530 aa8.11□□□□□ -1.11
MCM4-213ENST00000521261 USP17L22D6RA61 530 aa8.11□□□□□ -1.11
MCM4-213ENST00000521261 USP17L17D6RBQ6 530 aa8.11□□□□□ -1.11
MCM4-213ENST00000521261 USP17L19D6RCP7 530 aa8.11□□□□□ -1.11
MCM4-213ENST00000521261 USP17L20D6RJB6 530 aa8.11□□□□□ -1.11
MCM4-213ENST00000521261 STAU1O95793 577 aaKnown RBP8.11□□□□□ -1.11
MCM4-213ENST00000521261 USP17L24Q0WX57 530 aa8.11□□□□□ -1.11
MCM4-213ENST00000521261 EML3Q32P44 896 aa8.11□□□□□ -1.11
MCM4-213ENST00000521261 TMEM164Q5U3C3 297 aa8.11□□□□□ -1.11
MCM4-213ENST00000521261 ZNF775Q96BV0 537 aaPredicted RBP8.11□□□□□ -1.11
MCM4-213ENST00000521261 TMEM88BA6NKF7 163 aa8.1□□□□□ -1.11
MCM4-213ENST00000521261 LGR5O75473 907 aa8.1□□□□□ -1.11
MCM4-213ENST00000521261 NR3C2P08235 984 aa8.1□□□□□ -1.11
MCM4-213ENST00000521261 CSB-PGBD3P0DP91 1061 aa8.1□□□□□ -1.11
MCM4-213ENST00000521261 PTK7Q13308 1070 aa8.1□□□□□ -1.11
MCM4-213ENST00000521261 OGFOD1Q8N543 542 aa8.1□□□□□ -1.11
MCM4-213ENST00000521261 ZNF592Q92610 1267 aa8.1□□□□□ -1.11
MCM4-213ENST00000521261 NOVA2Q9UNW9 492 aaKnown RBP8.1□□□□□ -1.11
MCM4-213ENST00000521261 BICRAQ9NZM4 1560 aa8.09□□□□□ -1.11
MCM4-213ENST00000521261 MAP7D1Q3KQU3 841 aa8.09□□□□□ -1.11
MCM4-213ENST00000521261 TRAIPQ9BWF2 469 aa8.09□□□□□ -1.11
MCM4-213ENST00000521261 SLAIN2Q9P270 581 aa8.09□□□□□ -1.11
MCM4-213ENST00000521261 MAP4K5Q9Y4K4 846 aa8.09□□□□□ -1.11
MCM4-213ENST00000521261 WASF2Q9Y6W5 498 aa8.09□□□□□ -1.11
MCM4-213ENST00000521261 SHROOM4Q9ULL8 1493 aa8.08□□□□□ -1.12
MCM4-213ENST00000521261 ZBTB7BO15156 539 aaPredicted RBP8.08□□□□□ -1.12
MCM4-213ENST00000521261 ADH1CP00326 375 aa8.08□□□□□ -1.12
MCM4-213ENST00000521261 GTF2IP78347 998 aa8.08□□□□□ -1.12
MCM4-213ENST00000521261 AEBP1Q8IUX7 1158 aa8.08□□□□□ -1.12
MCM4-213ENST00000521261 KLF16Q9BXK1 252 aaPredicted RBP8.08□□□□□ -1.12
MCM4-213ENST00000521261 CYLDQ9NQC7 956 aa8.08□□□□□ -1.12
MCM4-213ENST00000521261 NOD1Q9Y239 953 aa8.08□□□□□ -1.12
MCM4-213ENST00000521261 DPYDQ12882 1025 aa8.07□□□□□ -1.12
MCM4-213ENST00000521261 NNTQ13423 1086 aa8.07□□□□□ -1.12
MCM4-213ENST00000521261 RNF20Q5VTR2 975 aa8.07□□□□□ -1.12
MCM4-213ENST00000521261 CDV3Q9UKY7 258 aaKnown RBP8.07□□□□□ -1.12
MCM4-213ENST00000521261 PCDHGA11Q9Y5H2 935 aa8.07□□□□□ -1.12
MCM4-213ENST00000521261 FAM196BA6NMK8 535 aa8.06□□□□□ -1.12
MCM4-213ENST00000521261 SFI1A8K8P3 1242 aa8.06□□□□□ -1.12
MCM4-213ENST00000521261 ATP5J2-PTCD1G3V325 749 aa8.06□□□□□ -1.12
MCM4-213ENST00000521261 DKK1O94907 266 aa8.06□□□□□ -1.12
MCM4-213ENST00000521261 LARP1Q6PKG0 1096 aaKnown RBP8.06□□□□□ -1.12
MCM4-213ENST00000521261 ZNF784Q8NCA9 323 aaPredicted RBP8.06□□□□□ -1.12
MCM4-213ENST00000521261 TRIM47Q96LD4 638 aa8.06□□□□□ -1.12
MCM4-213ENST00000521261 DNAAF2Q9NVR5 837 aaKnown RBP8.06□□□□□ -1.12
MCM4-213ENST00000521261 CAPN5O15484 640 aaPredicted RBP8.05□□□□□ -1.12
MCM4-213ENST00000521261 TIMP2P16035 220 aa8.05□□□□□ -1.12
MCM4-213ENST00000521261 PPP1R26Q5T8A7 1209 aaPredicted RBP8.05□□□□□ -1.12
MCM4-213ENST00000521261 TRIM46Q7Z4K8 759 aa8.05□□□□□ -1.12
MCM4-213ENST00000521261 ANKMY2Q8IV38 441 aa8.05□□□□□ -1.12
MCM4-213ENST00000521261 SEPT12Q8IYM1 358 aa8.05□□□□□ -1.12
MCM4-213ENST00000521261 GAS2L2Q8NHY3 880 aa8.05□□□□□ -1.12
MCM4-213ENST00000521261 C11orf95C9JLR9 678 aaPredicted RBP8.04□□□□□ -1.12
MCM4-213ENST00000521261 SCNN1AP37088 669 aa8.04□□□□□ -1.12
MCM4-213ENST00000521261 PSME1Q06323 249 aa8.04□□□□□ -1.12
MCM4-213ENST00000521261 FAM69CQ0P6D2 419 aa8.04□□□□□ -1.12
MCM4-213ENST00000521261 LCE2AQ5TA79 106 aaPredicted RBP8.04□□□□□ -1.12
MCM4-213ENST00000521261 TPCN2Q8NHX9 752 aa8.04□□□□□ -1.12
MCM4-213ENST00000521261 SENP2Q9HC62 589 aa8.04□□□□□ -1.12
MCM4-213ENST00000521261 LZTS3O60299 673 aaPredicted RBP8.03□□□□□ -1.12
MCM4-213ENST00000521261 LILRA1O75019 489 aa8.03□□□□□ -1.12
MCM4-213ENST00000521261 SNRPBP14678 240 aaKnown RBP8.03□□□□□ -1.12
MCM4-213ENST00000521261 ADD1P35611 737 aaKnown RBP8.03□□□□□ -1.12
MCM4-213ENST00000521261 NR5A1Q13285 461 aa8.03□□□□□ -1.12
MCM4-213ENST00000521261 ELOAQ14241 798 aaKnown RBP8.03□□□□□ -1.12
MCM4-213ENST00000521261 CCDC116Q8IYX3 515 aa8.03□□□□□ -1.12
MCM4-213ENST00000521261 FAM200AQ8TCP9 573 aa8.03□□□□□ -1.12
MCM4-213ENST00000521261 OSBPL3Q9H4L5 887 aa8.03□□□□□ -1.12
MCM4-213ENST00000521261 USTQ9Y2C2 406 aa8.03□□□□□ -1.12
MCM4-213ENST00000521261 BMP1P13497 986 aa8.03□□□□□ -1.12
MCM4-213ENST00000521261 ERVK-9P63128 1117 aa8.03□□□□□ -1.12
MCM4-213ENST00000521261 USP4Q13107 963 aa8.03□□□□□ -1.12
MCM4-213ENST00000521261 CCDC102BQ68D86 513 aa8.03□□□□□ -1.12
MCM4-213ENST00000521261 TRIM50Q86XT4 487 aa8.03□□□□□ -1.12
MCM4-213ENST00000521261 SCRIBQ14160 1630 aa8.02□□□□□ -1.13
MCM4-213ENST00000521261 CBLBQ13191 982 aa8.02□□□□□ -1.13
MCM4-213ENST00000521261 CC2D2BQ6DHV5 1058 aa8.02□□□□□ -1.13
MCM4-213ENST00000521261 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.02□□□□□ -1.13
MCM4-213ENST00000521261 KIFC2Q96AC6 838 aa8.02□□□□□ -1.13
MCM4-213ENST00000521261 PODXL2Q9NZ53 605 aa8.02□□□□□ -1.13
MCM4-213ENST00000521261 MYCP01106 439 aaPredicted RBP8.01□□□□□ -1.13
MCM4-213ENST00000521261 ATP1A2P50993 1020 aa8.01□□□□□ -1.13
MCM4-213ENST00000521261 WDR4P57081 412 aaKnown RBP8.01□□□□□ -1.13
MCM4-213ENST00000521261 PHLDB3Q6NSJ2 640 aa8.01□□□□□ -1.13
MCM4-213ENST00000521261 SIX5Q8N196 739 aa8.01□□□□□ -1.13
MCM4-213ENST00000521261 LARGE2Q8N3Y3 721 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms