RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 PPP1R1BQ9UD71 204 aaPredicted RBP21.89■■□□□ 1.1
CLN8-205ENST00000520991 HSPA5P11021 654 aaKnown RBP21.88■■□□□ 1.09
CLN8-205ENST00000520991 RAPGEF4Q8WZA2 1011 aa21.88■■□□□ 1.09
CLN8-205ENST00000520991 SYTL4Q96C24 671 aaPredicted RBP21.87■■□□□ 1.09
CLN8-205ENST00000520991 EMILIN1Q9Y6C2 1016 aa21.87■■□□□ 1.09
CLN8-205ENST00000520991 CASZ1Q86V15 1759 aa21.87■■□□□ 1.09
CLN8-205ENST00000520991 PPM1GO15355 546 aaPredicted RBP21.86■■□□□ 1.09
CLN8-205ENST00000520991 SLC15A2Q16348 729 aa21.86■■□□□ 1.09
CLN8-205ENST00000520991 SHANK3Q9BYB0 1731 aa21.86■■□□□ 1.09
CLN8-205ENST00000520991 TATP17735 454 aaPredicted RBP21.85■■□□□ 1.09
CLN8-205ENST00000520991 DOT1LQ8TEK3 1739 aa21.85■■□□□ 1.09
CLN8-205ENST00000520991 PDGFDQ9GZP0 370 aaPredicted RBP21.84■■□□□ 1.09
CLN8-205ENST00000520991 ZBTB7AO95365 584 aa21.83■■□□□ 1.09
CLN8-205ENST00000520991 PRIM1P49642 420 aaKnown RBP21.83■■□□□ 1.09
CLN8-205ENST00000520991 ANKRD26Q9UPS8 1709 aa21.81■■□□□ 1.08
CLN8-205ENST00000520991 PAPPAQ13219 1627 aa21.81■■□□□ 1.08
CLN8-205ENST00000520991 PCDH11XQ9BZA7 1347 aa21.8■■□□□ 1.08
CLN8-205ENST00000520991 PCDH11YQ9BZA8 1340 aa21.8■■□□□ 1.08
CLN8-205ENST00000520991 SLC27A3Q5K4L6 730 aa21.8■■□□□ 1.08
CLN8-205ENST00000520991 LRRC4BQ9NT99 713 aa21.8■■□□□ 1.08
CLN8-205ENST00000520991 TNNT2P45379 298 aaPredicted RBP21.79■■□□□ 1.08
CLN8-205ENST00000520991 PANK3Q9H999 370 aa21.79■■□□□ 1.08
CLN8-205ENST00000520991 ATF5Q9Y2D1 282 aaPredicted RBP21.79■■□□□ 1.08
CLN8-205ENST00000520991 NSD2O96028 1365 aa21.78■■□□□ 1.08
CLN8-205ENST00000520991 WASHC2AQ641Q2 1341 aa21.78■■□□□ 1.08
CLN8-205ENST00000520991 MAP2P11137 1827 aaKnown RBP21.77■■□□□ 1.08
CLN8-205ENST00000520991 ZNF827Q17R98 1081 aa21.77■■□□□ 1.07
CLN8-205ENST00000520991 MTFR1LQ9H019 292 aa21.77■■□□□ 1.07
CLN8-205ENST00000520991 POLKQ9UBT6 870 aa21.77■■□□□ 1.07
CLN8-205ENST00000520991 PTGER2P43116 358 aa21.74■■□□□ 1.07
CLN8-205ENST00000520991 NCAPD2Q15021 1401 aa21.73■■□□□ 1.07
CLN8-205ENST00000520991 LY75O60449 1722 aa21.73■■□□□ 1.07
CLN8-205ENST00000520991 KCNQ4P56696 695 aa21.73■■□□□ 1.07
CLN8-205ENST00000520991 AKT1S1Q96B36 256 aa21.73■■□□□ 1.07
CLN8-205ENST00000520991 PKD1L3Q7Z443 1732 aa21.72■■□□□ 1.07
CLN8-205ENST00000520991 DCAF8L1A6NGE4 600 aa21.72■■□□□ 1.07
CLN8-205ENST00000520991 EYA1Q99502 592 aa21.72■■□□□ 1.07
CLN8-205ENST00000520991 CCNL1Q9UK58 526 aaPredicted RBP21.72■■□□□ 1.07
CLN8-205ENST00000520991 CYP27B1O15528 508 aa21.71■■□□□ 1.07
CLN8-205ENST00000520991 SPG7Q9UQ90 795 aa21.71■■□□□ 1.07
CLN8-205ENST00000520991 TFCP2L1Q9NZI6 479 aa21.7■■□□□ 1.06
CLN8-205ENST00000520991 EIF4A2Q14240 407 aaKnown RBP21.69■■□□□ 1.06
CLN8-205ENST00000520991 MPRIPQ6WCQ1 1025 aa21.69■■□□□ 1.06
CLN8-205ENST00000520991 MORC1Q86VD1 984 aa21.68■■□□□ 1.06
CLN8-205ENST00000520991 KNSTRNQ9Y448 316 aa21.68■■□□□ 1.06
CLN8-205ENST00000520991 QSER1Q2KHR3 1735 aa21.68■■□□□ 1.06
CLN8-205ENST00000520991 TOGARAM1Q9Y4F4 1720 aa21.66■■□□□ 1.06
CLN8-205ENST00000520991 SGIP1Q9BQI5 828 aa21.66■■□□□ 1.06
CLN8-205ENST00000520991 PNPLA7Q6ZV29 1317 aa21.66■■□□□ 1.06
CLN8-205ENST00000520991 PALLDQ8WX93 1383 aa21.66■■□□□ 1.06
CLN8-205ENST00000520991 SLC16A10Q8TF71 515 aa21.65■■□□□ 1.06
CLN8-205ENST00000520991 ARXQ96QS3 562 aa21.65■■□□□ 1.06
CLN8-205ENST00000520991 FHDC1Q9C0D6 1143 aaPredicted RBP21.65■■□□□ 1.06
CLN8-205ENST00000520991 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.65■■□□□ 1.06
CLN8-205ENST00000520991 TUBGCP6Q96RT7 1819 aa21.64■■□□□ 1.05
CLN8-205ENST00000520991 KIF7Q2M1P5 1343 aa21.64■■□□□ 1.05
CLN8-205ENST00000520991 NKX1-1Q15270 411 aaPredicted RBP21.63■■□□□ 1.05
CLN8-205ENST00000520991 SMARCC1Q92922 1105 aaPredicted RBP21.63■■□□□ 1.05
CLN8-205ENST00000520991 ITGB4P16144 1822 aa21.63■■□□□ 1.05
CLN8-205ENST00000520991 HMGB2P26583 209 aaKnown RBP21.62■■□□□ 1.05
CLN8-205ENST00000520991 IFNL2Q8IZJ0 200 aa21.62■■□□□ 1.05
CLN8-205ENST00000520991 SYT17Q9BSW7 474 aa21.62■■□□□ 1.05
CLN8-205ENST00000520991 IGSF1Q8N6C5 1336 aa21.62■■□□□ 1.05
CLN8-205ENST00000520991 C5P01031 1676 aa21.62■■□□□ 1.05
CLN8-205ENST00000520991 MSH5O43196 834 aa21.61■■□□□ 1.05
CLN8-205ENST00000520991 PHKG2P15735 406 aa21.61■■□□□ 1.05
CLN8-205ENST00000520991 POLD1P28340 1107 aa21.61■■□□□ 1.05
CLN8-205ENST00000520991 PIGBQ92521 554 aa21.6■■□□□ 1.05
CLN8-205ENST00000520991 TMOD3Q9NYL9 352 aa21.6■■□□□ 1.05
CLN8-205ENST00000520991 PLEKHG2Q9H7P9 1386 aa21.6■■□□□ 1.05
CLN8-205ENST00000520991 YY1P25490 414 aa21.59■■□□□ 1.05
CLN8-205ENST00000520991 AMER1Q5JTC6 1135 aaPredicted RBP21.56■■□□□ 1.04
CLN8-205ENST00000520991 COL23A1Q86Y22 540 aaPredicted RBP21.56■■□□□ 1.04
CLN8-205ENST00000520991 KLHL34Q8N239 644 aa21.56■■□□□ 1.04
CLN8-205ENST00000520991 MAP3K5Q99683 1374 aa21.56■■□□□ 1.04
CLN8-205ENST00000520991 PLEKHO1Q53GL0 409 aaPredicted RBP21.55■■□□□ 1.04
CLN8-205ENST00000520991 TAF1LQ8IZX4 1826 aa21.55■■□□□ 1.04
CLN8-205ENST00000520991 AK7Q96M32 723 aa21.55■■□□□ 1.04
CLN8-205ENST00000520991 C4BP0C0L5 1744 aa21.54■■□□□ 1.04
CLN8-205ENST00000520991 COL24A1Q17RW2 1714 aa21.54■■□□□ 1.04
CLN8-205ENST00000520991 HSP90AB1P08238 724 aaKnown RBP21.54■■□□□ 1.04
CLN8-205ENST00000520991 AMOTQ4VCS5 1084 aa21.54■■□□□ 1.04
CLN8-205ENST00000520991 FLAD1Q8NFF5 587 aa21.54■■□□□ 1.04
CLN8-205ENST00000520991 LOC102724428A0A0B4J2F2 783 aa21.53■■□□□ 1.04
CLN8-205ENST00000520991 SIK1P57059 783 aa21.53■■□□□ 1.04
CLN8-205ENST00000520991 ZNF530Q6P9A1 599 aaPredicted RBP21.53■■□□□ 1.04
CLN8-205ENST00000520991 AEBP1Q8IUX7 1158 aa21.53■■□□□ 1.04
CLN8-205ENST00000520991 ASAP1Q9ULH1 1129 aa21.53■■□□□ 1.04
CLN8-205ENST00000520991 MSL1Q68DK7 614 aa21.52■■□□□ 1.03
CLN8-205ENST00000520991 SULT6B1Q6IMI4 303 aa21.52■■□□□ 1.03
CLN8-205ENST00000520991 DCAF5Q96JK2 942 aa21.52■■□□□ 1.03
CLN8-205ENST00000520991 UTRNP46939 3433 aa21.51■■□□□ 1.03
CLN8-205ENST00000520991 ERVV-2B6SEH9 535 aa21.5■■□□□ 1.03
CLN8-205ENST00000520991 IL13P35225 146 aa21.5■■□□□ 1.03
CLN8-205ENST00000520991 CC2D1BQ5T0F9 858 aaKnown RBP21.5■■□□□ 1.03
CLN8-205ENST00000520991 PHF14O94880 888 aa21.49■■□□□ 1.03
CLN8-205ENST00000520991 ATP6V1AP38606 617 aa21.49■■□□□ 1.03
CLN8-205ENST00000520991 MTHFSP49914 203 aa21.49■■□□□ 1.03
CLN8-205ENST00000520991 C1orf141Q5JVX7 400 aa21.49■■□□□ 1.03
CLN8-205ENST00000520991 ATG3Q9NT62 314 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms