RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 ZCRB1Q8TBF4 217 aaKnown RBP23.22■■□□□ 1.31
TRAM1-203ENST00000520700 PNISRQ8TF01 805 aaKnown RBP23.22■■□□□ 1.31
TRAM1-203ENST00000520700 RSPH6AQ9H0K4 717 aa23.22■■□□□ 1.31
TRAM1-203ENST00000520700 PNNQ9H307 717 aaKnown RBP23.22■■□□□ 1.31
TRAM1-203ENST00000520700 MRS2Q9HD23 443 aa23.22■■□□□ 1.31
TRAM1-203ENST00000520700 WNK3Q9BYP7 1800 aa23.22■■□□□ 1.31
TRAM1-203ENST00000520700 AMOTQ4VCS5 1084 aa23.21■■□□□ 1.31
TRAM1-203ENST00000520700 PLEKHO1Q53GL0 409 aaPredicted RBP23.2■■□□□ 1.3
TRAM1-203ENST00000520700 MIER1Q8N108 512 aa23.2■■□□□ 1.3
TRAM1-203ENST00000520700 SPG7Q9UQ90 795 aa23.2■■□□□ 1.3
TRAM1-203ENST00000520700 TNS2Q63HR2 1409 aa23.19■■□□□ 1.3
TRAM1-203ENST00000520700 WDR43Q15061 677 aaKnown RBP eCLIP23.19■■□□□ 1.3
TRAM1-203ENST00000520700 A0A0G2JS52 829 aa23.18■■□□□ 1.3
TRAM1-203ENST00000520700 MYT1Q01538 1121 aa23.18■■□□□ 1.3
TRAM1-203ENST00000520700 PDE3BQ13370 1112 aa23.18■■□□□ 1.3
TRAM1-203ENST00000520700 KRT27Q7Z3Y8 459 aa23.18■■□□□ 1.3
TRAM1-203ENST00000520700 ADAMTS8Q9UP79 889 aa23.18■■□□□ 1.3
TRAM1-203ENST00000520700 PLEKHF1Q96S99 279 aa23.17■■□□□ 1.3
TRAM1-203ENST00000520700 PRKAR2BP31323 418 aa23.16■■□□□ 1.3
TRAM1-203ENST00000520700 BCL9O00512 1426 aa23.16■■□□□ 1.3
TRAM1-203ENST00000520700 LRRC37A3O60309 1634 aa23.15■■□□□ 1.3
TRAM1-203ENST00000520700 MARCH10Q8NA82 808 aaPredicted RBP23.15■■□□□ 1.3
TRAM1-203ENST00000520700 PCDH11XQ9BZA7 1347 aa23.14■■□□□ 1.3
TRAM1-203ENST00000520700 PCDH11YQ9BZA8 1340 aa23.14■■□□□ 1.3
TRAM1-203ENST00000520700 PKD1L3Q7Z443 1732 aa23.13■■□□□ 1.29
TRAM1-203ENST00000520700 CYP27B1O15528 508 aa23.13■■□□□ 1.29
TRAM1-203ENST00000520700 NKX1-1Q15270 411 aaPredicted RBP23.13■■□□□ 1.29
TRAM1-203ENST00000520700 IFNL2Q8IZJ0 200 aa23.12■■□□□ 1.29
TRAM1-203ENST00000520700 PHACTR3Q96KR7 559 aa23.12■■□□□ 1.29
TRAM1-203ENST00000520700 MTHFSDQ2M296 383 aaKnown RBP23.11■■□□□ 1.29
TRAM1-203ENST00000520700 GAS2L2Q8NHY3 880 aa23.11■■□□□ 1.29
TRAM1-203ENST00000520700 BRWD3Q6RI45 1802 aa23.1■■□□□ 1.29
TRAM1-203ENST00000520700 NEFMP07197 916 aa23.1■■□□□ 1.29
TRAM1-203ENST00000520700 PHKG2P15735 406 aa23.1■■□□□ 1.29
TRAM1-203ENST00000520700 FAM196AQ6ZSG2 479 aa23.1■■□□□ 1.29
TRAM1-203ENST00000520700 DDX54Q8TDD1 881 aaKnown RBP23.1■■□□□ 1.29
TRAM1-203ENST00000520700 RUNDC1Q96C34 613 aa23.1■■□□□ 1.29
TRAM1-203ENST00000520700 AKAP4Q5JQC9 854 aa23.09■■□□□ 1.29
TRAM1-203ENST00000520700 ZNF530Q6P9A1 599 aaPredicted RBP23.09■■□□□ 1.29
TRAM1-203ENST00000520700 HSP90AB1P08238 724 aaKnown RBP23.08■■□□□ 1.29
TRAM1-203ENST00000520700 ILDR2Q71H61 639 aa23.08■■□□□ 1.29
TRAM1-203ENST00000520700 SHANK3Q9BYB0 1731 aa23.08■■□□□ 1.28
TRAM1-203ENST00000520700 C1orf141Q5JVX7 400 aa23.06■■□□□ 1.28
TRAM1-203ENST00000520700 MAPK8IP3Q9UPT6 1336 aa23.06■■□□□ 1.28
TRAM1-203ENST00000520700 DCAF5Q96JK2 942 aa23.05■■□□□ 1.28
TRAM1-203ENST00000520700 HTATSF1O43719 755 aaKnown RBP23.04■■□□□ 1.28
TRAM1-203ENST00000520700 NFE2L2Q16236 605 aa23.04■■□□□ 1.28
TRAM1-203ENST00000520700 NCBP3Q53F19 620 aaKnown RBP23.03■■□□□ 1.28
TRAM1-203ENST00000520700 GNAT3A8MTJ3 354 aa23.02■■□□□ 1.28
TRAM1-203ENST00000520700 FAM182BQ5T319 152 aa23.02■■□□□ 1.28
TRAM1-203ENST00000520700 FAM9BQ8IZU0 186 aa23.02■■□□□ 1.28
TRAM1-203ENST00000520700 TMPOP42166 694 aaKnown RBP23.01■■□□□ 1.27
TRAM1-203ENST00000520700 CCDC146Q8IYE0 955 aa23.01■■□□□ 1.27
TRAM1-203ENST00000520700 MAP3K5Q99683 1374 aa23.01■■□□□ 1.27
TRAM1-203ENST00000520700 ERVV-2B6SEH9 535 aa23■■□□□ 1.27
TRAM1-203ENST00000520700 CCDC125Q86Z20 511 aa22.98■■□□□ 1.27
TRAM1-203ENST00000520700 RNMTO43148 476 aaKnown RBP22.97■■□□□ 1.27
TRAM1-203ENST00000520700 MPRIPQ6WCQ1 1025 aa22.97■■□□□ 1.27
TRAM1-203ENST00000520700 NGEFQ8N5V2 710 aa22.97■■□□□ 1.27
TRAM1-203ENST00000520700 IL17REQ8NFR9 667 aa22.97■■□□□ 1.27
TRAM1-203ENST00000520700 BCL11BQ9C0K0 894 aaPredicted RBP22.97■■□□□ 1.27
TRAM1-203ENST00000520700 KDM6AO15550 1401 aaPredicted RBP22.97■■□□□ 1.27
TRAM1-203ENST00000520700 APAF1O14727 1248 aa22.96■■□□□ 1.27
TRAM1-203ENST00000520700 RIPK4P57078 832 aa22.96■■□□□ 1.27
TRAM1-203ENST00000520700 CEMIPQ8WUJ3 1361 aa22.96■■□□□ 1.27
TRAM1-203ENST00000520700 ADAMTS7Q9UKP4 1686 aa22.96■■□□□ 1.27
TRAM1-203ENST00000520700 LMOD3Q0VAK6 560 aa22.95■■□□□ 1.26
TRAM1-203ENST00000520700 RTF1Q92541 710 aaKnown RBP22.95■■□□□ 1.26
TRAM1-203ENST00000520700 LGR6Q9HBX8 967 aa22.95■■□□□ 1.26
TRAM1-203ENST00000520700 PRIM1P49642 420 aaKnown RBP22.94■■□□□ 1.26
TRAM1-203ENST00000520700 KCNQ2O43526 872 aa22.93■■□□□ 1.26
TRAM1-203ENST00000520700 TRIM37O94972 964 aa22.92■■□□□ 1.26
TRAM1-203ENST00000520700 CCDC27Q2M243 656 aa22.92■■□□□ 1.26
TRAM1-203ENST00000520700 ACSBG1Q96GR2 724 aa22.92■■□□□ 1.26
TRAM1-203ENST00000520700 SBF2Q86WG5 1849 aa22.92■■□□□ 1.26
TRAM1-203ENST00000520700 SLC52A2Q9HAB3 445 aa22.91■■□□□ 1.26
TRAM1-203ENST00000520700 TRIM35Q9UPQ4 493 aa22.91■■□□□ 1.26
TRAM1-203ENST00000520700 EP400Q96L91 3159 aa22.9■■□□□ 1.26
TRAM1-203ENST00000520700 CABP4P57796 275 aa22.9■■□□□ 1.26
TRAM1-203ENST00000520700 UPF1Q92900 1129 aaKnown RBP eCLIP22.9■■□□□ 1.26
TRAM1-203ENST00000520700 MRC1P22897 1456 aa22.9■■□□□ 1.26
TRAM1-203ENST00000520700 NHSQ6T4R5 1651 aa22.9■■□□□ 1.26
TRAM1-203ENST00000520700 SCN11AQ9UI33 1791 aa22.89■■□□□ 1.26
TRAM1-203ENST00000520700 PIGBQ92521 554 aa22.89■■□□□ 1.25
TRAM1-203ENST00000520700 TMOD3Q9NYL9 352 aa22.89■■□□□ 1.25
TRAM1-203ENST00000520700 RRP7AQ9Y3A4 280 aaKnown RBP22.89■■□□□ 1.25
TRAM1-203ENST00000520700 TOGARAM1Q9Y4F4 1720 aa22.88■■□□□ 1.25
TRAM1-203ENST00000520700 PLSCR1O15162 318 aa22.88■■□□□ 1.25
TRAM1-203ENST00000520700 MCM10Q7L590 875 aa22.88■■□□□ 1.25
TRAM1-203ENST00000520700 PTF1AQ7RTS3 328 aa22.88■■□□□ 1.25
TRAM1-203ENST00000520700 NFATC2IPQ8NCF5 419 aa22.88■■□□□ 1.25
TRAM1-203ENST00000520700 TEFQ10587 303 aa22.87■■□□□ 1.25
TRAM1-203ENST00000520700 NEUROD2Q15784 382 aa22.87■■□□□ 1.25
TRAM1-203ENST00000520700 SYTL4Q96C24 671 aaPredicted RBP22.87■■□□□ 1.25
TRAM1-203ENST00000520700 DOT1LQ8TEK3 1739 aa22.87■■□□□ 1.25
TRAM1-203ENST00000520700 DLG5Q8TDM6 1919 aa22.86■■□□□ 1.25
TRAM1-203ENST00000520700 DCTN1Q14203 1278 aa22.86■■□□□ 1.25
TRAM1-203ENST00000520700 BABAM1Q9NWV8 329 aa22.85■■□□□ 1.25
TRAM1-203ENST00000520700 SF3B2Q13435 895 aaKnown RBP22.84■■□□□ 1.25
TRAM1-203ENST00000520700 TAF7Q15545 349 aaPredicted RBP22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms