RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 GLI3P10071 1580 aa12.71□□□□□ -0.38
SPARC-202ENST00000520687 USP54Q70EL1 1684 aa12.71□□□□□ -0.38
SPARC-202ENST00000520687 EIF4A2Q14240 407 aaKnown RBP12.7□□□□□ -0.38
SPARC-202ENST00000520687 RRS1Q15050 365 aaKnown RBP12.7□□□□□ -0.38
SPARC-202ENST00000520687 ATF7IPQ6VMQ6 1270 aa12.7□□□□□ -0.38
SPARC-202ENST00000520687 TSR2Q969E8 191 aaKnown RBP12.7□□□□□ -0.38
SPARC-202ENST00000520687 PHACTR3Q96KR7 559 aa12.7□□□□□ -0.38
SPARC-202ENST00000520687 CFAP44Q96MT7 982 aa12.7□□□□□ -0.38
SPARC-202ENST00000520687 DDX19BQ9UMR2 479 aa12.7□□□□□ -0.38
SPARC-202ENST00000520687 ARHGEF10O15013 1369 aa12.7□□□□□ -0.38
SPARC-202ENST00000520687 MARF1Q9Y4F3 1742 aaKnown RBP12.7□□□□□ -0.38
SPARC-202ENST00000520687 FLT4P35916 1363 aa12.69□□□□□ -0.38
SPARC-202ENST00000520687 HMOX1P09601 288 aa12.69□□□□□ -0.38
SPARC-202ENST00000520687 SSH1Q8WYL5 1049 aa12.69□□□□□ -0.38
SPARC-202ENST00000520687 PPP1R1BQ9UD71 204 aaPredicted RBP12.69□□□□□ -0.38
SPARC-202ENST00000520687 ERICH6Q7L0X2 663 aa12.69□□□□□ -0.38
SPARC-202ENST00000520687 SEPT12Q8IYM1 358 aa12.69□□□□□ -0.38
SPARC-202ENST00000520687 ADGRL3Q9HAR2 1447 aa12.68□□□□□ -0.38
SPARC-202ENST00000520687 SOS2Q07890 1332 aaPredicted RBP12.68□□□□□ -0.38
SPARC-202ENST00000520687 FBLN1P23142 703 aa12.68□□□□□ -0.38
SPARC-202ENST00000520687 KRT27Q7Z3Y8 459 aa12.68□□□□□ -0.38
SPARC-202ENST00000520687 IPO9Q96P70 1041 aaKnown RBP12.68□□□□□ -0.38
SPARC-202ENST00000520687 HTATSF1O43719 755 aaKnown RBP12.67□□□□□ -0.38
SPARC-202ENST00000520687 FAM161AQ3B820 660 aa12.67□□□□□ -0.38
SPARC-202ENST00000520687 UNC5CLQ8IV45 518 aa12.67□□□□□ -0.38
SPARC-202ENST00000520687 RGPD1P0DJD0 1748 aa12.67□□□□□ -0.38
SPARC-202ENST00000520687 EN1Q05925 392 aaPredicted RBP12.66□□□□□ -0.38
SPARC-202ENST00000520687 SULT6B1Q6IMI4 303 aa12.66□□□□□ -0.38
SPARC-202ENST00000520687 DISP2A7MBM2 1401 aa12.65□□□□□ -0.38
SPARC-202ENST00000520687 VAMP4O75379 141 aa12.65□□□□□ -0.38
SPARC-202ENST00000520687 RLBP1P12271 317 aa12.65□□□□□ -0.38
SPARC-202ENST00000520687 TRIM27P14373 513 aa12.65□□□□□ -0.38
SPARC-202ENST00000520687 HDAC1Q13547 482 aaPredicted RBP12.65□□□□□ -0.38
SPARC-202ENST00000520687 PHF8Q9UPP1 1060 aa12.65□□□□□ -0.38
SPARC-202ENST00000520687 MAP3K19Q56UN5 1328 aa12.65□□□□□ -0.38
SPARC-202ENST00000520687 RTL1A6NKG5 1358 aa12.65□□□□□ -0.38
SPARC-202ENST00000520687 KDRP35968 1356 aa12.65□□□□□ -0.38
SPARC-202ENST00000520687 NUTM2FA1L443 756 aa12.64□□□□□ -0.39
SPARC-202ENST00000520687 IGHDP01880 384 aa12.64□□□□□ -0.39
SPARC-202ENST00000520687 AMPHP49418 695 aa12.64□□□□□ -0.39
SPARC-202ENST00000520687 DDRGK1Q96HY6 314 aa12.64□□□□□ -0.39
SPARC-202ENST00000520687 BCL11AQ9H165 835 aa12.64□□□□□ -0.39
SPARC-202ENST00000520687 NOB1Q9ULX3 412 aaKnown RBP12.64□□□□□ -0.39
SPARC-202ENST00000520687 KIAA0232Q92628 1395 aa12.64□□□□□ -0.39
SPARC-202ENST00000520687 NLRP6P59044 892 aa12.64□□□□□ -0.39
SPARC-202ENST00000520687 HSP90AB2PQ58FF8 381 aa12.64□□□□□ -0.39
SPARC-202ENST00000520687 GAS2L2Q8NHY3 880 aa12.64□□□□□ -0.39
SPARC-202ENST00000520687 BCL2L13Q9BXK5 485 aa12.64□□□□□ -0.39
SPARC-202ENST00000520687 PIK3C2AO00443 1686 aa12.63□□□□□ -0.39
SPARC-202ENST00000520687 CHL1O00533 1208 aa12.63□□□□□ -0.39
SPARC-202ENST00000520687 API5Q9BZZ5 524 aaKnown RBP12.63□□□□□ -0.39
SPARC-202ENST00000520687 SPON1Q9HCB6 807 aa12.63□□□□□ -0.39
SPARC-202ENST00000520687 MBIPQ9NS73 344 aa12.63□□□□□ -0.39
SPARC-202ENST00000520687 BABAM1Q9NWV8 329 aa12.63□□□□□ -0.39
SPARC-202ENST00000520687 SOS1Q07889 1333 aaPredicted RBP12.63□□□□□ -0.39
SPARC-202ENST00000520687 IGSF1Q8N6C5 1336 aa12.63□□□□□ -0.39
SPARC-202ENST00000520687 KIF1AQ12756 1690 aa12.63□□□□□ -0.39
SPARC-202ENST00000520687 SLIT2O94813 1529 aa12.62□□□□□ -0.39
SPARC-202ENST00000520687 TWISTNBQ3B726 338 aaPredicted RBP12.62□□□□□ -0.39
SPARC-202ENST00000520687 MRPL50Q8N5N7 158 aaKnown RBP12.62□□□□□ -0.39
SPARC-202ENST00000520687 KCNH5Q8NCM2 988 aa12.62□□□□□ -0.39
SPARC-202ENST00000520687 ZBTB47Q9UFB7 747 aaPredicted RBP12.62□□□□□ -0.39
SPARC-202ENST00000520687 NOP58Q9Y2X3 529 aaKnown RBP12.62□□□□□ -0.39
SPARC-202ENST00000520687 LAS1LQ9Y4W2 734 aaKnown RBP12.62□□□□□ -0.39
SPARC-202ENST00000520687 PCDHB15Q9Y5E8 787 aa12.62□□□□□ -0.39
SPARC-202ENST00000520687 C1orf167Q5SNV9 1468 aa12.62□□□□□ -0.39
SPARC-202ENST00000520687 CAMTA1Q9Y6Y1 1673 aa12.61□□□□□ -0.39
SPARC-202ENST00000520687 ONECUT3O60422 494 aaPredicted RBP12.61□□□□□ -0.39
SPARC-202ENST00000520687 ABTB2Q8N961 1025 aa12.61□□□□□ -0.39
SPARC-202ENST00000520687 GIGYF1O75420 1035 aaPredicted RBP12.6□□□□□ -0.39
SPARC-202ENST00000520687 ITPRIPQ8IWB1 547 aa12.6□□□□□ -0.39
SPARC-202ENST00000520687 RTF1Q92541 710 aaKnown RBP12.6□□□□□ -0.39
SPARC-202ENST00000520687 ZBTB40Q9NUA8 1239 aa12.6□□□□□ -0.39
SPARC-202ENST00000520687 PEAK1Q9H792 1746 aa12.59□□□□□ -0.39
SPARC-202ENST00000520687 HOXC9P31274 260 aa12.59□□□□□ -0.39
SPARC-202ENST00000520687 PSME1Q06323 249 aa12.59□□□□□ -0.39
SPARC-202ENST00000520687 AEBP1Q8IUX7 1158 aa12.59□□□□□ -0.39
SPARC-202ENST00000520687 CHMP4AQ9BY43 222 aa12.59□□□□□ -0.39
SPARC-202ENST00000520687 VPS72Q15906 364 aa12.58□□□□□ -0.4
SPARC-202ENST00000520687 C8orf34Q49A92 452 aa12.58□□□□□ -0.4
SPARC-202ENST00000520687 TMEM57Q8N5G2 664 aa12.58□□□□□ -0.4
SPARC-202ENST00000520687 ABCC4O15439 1325 aa12.57□□□□□ -0.4
SPARC-202ENST00000520687 KCNQ2O43526 872 aa12.57□□□□□ -0.4
SPARC-202ENST00000520687 RGS3P49796 1198 aa12.57□□□□□ -0.4
SPARC-202ENST00000520687 SMC5Q8IY18 1101 aa12.57□□□□□ -0.4
SPARC-202ENST00000520687 IP6K1Q92551 441 aa12.57□□□□□ -0.4
SPARC-202ENST00000520687 EYA1Q99502 592 aa12.57□□□□□ -0.4
SPARC-202ENST00000520687 THUMPD2Q9BTF0 503 aaKnown RBP12.57□□□□□ -0.4
SPARC-202ENST00000520687 TNNQ9UQP3 1299 aa12.57□□□□□ -0.4
SPARC-202ENST00000520687 CRB1P82279 1406 aa12.57□□□□□ -0.4
SPARC-202ENST00000520687 PTPRCP08575 1304 aa12.56□□□□□ -0.4
SPARC-202ENST00000520687 A0A0G2JS52 829 aa12.56□□□□□ -0.4
SPARC-202ENST00000520687 PAK3O75914 559 aaPredicted RBP12.56□□□□□ -0.4
SPARC-202ENST00000520687 EZH2Q15910 746 aaKnown RBP12.56□□□□□ -0.4
SPARC-202ENST00000520687 CHD4Q14839 1912 aa12.56□□□□□ -0.4
SPARC-202ENST00000520687 TNS1Q9HBL0 1735 aaKnown RBP12.56□□□□□ -0.4
SPARC-202ENST00000520687 NBPF14Q5TI25 921 aa12.56□□□□□ -0.4
SPARC-202ENST00000520687 C8orf58Q8NAV2 365 aa12.56□□□□□ -0.4
SPARC-202ENST00000520687 PDZRN3Q9UPQ7 1066 aa12.56□□□□□ -0.4
SPARC-202ENST00000520687 CCDC9Q9Y3X0 531 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms