RNA–Protein interactions for RNA: ENST00000520522.1

CTNNA1-224, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 390 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-224ENST00000520522 KIF24Q5T7B8 1368 aa12.45□□□□□ -0.42
CTNNA1-224ENST00000520522 FYB1O15117 783 aa12.45□□□□□ -0.42
CTNNA1-224ENST00000520522 DDX54Q8TDD1 881 aaKnown RBP12.45□□□□□ -0.42
CTNNA1-224ENST00000520522 SGIP1Q9BQI5 828 aa12.45□□□□□ -0.42
CTNNA1-224ENST00000520522 ATF5Q9Y2D1 282 aaPredicted RBP12.45□□□□□ -0.42
CTNNA1-224ENST00000520522 MEGF6O75095 1541 aa12.45□□□□□ -0.42
CTNNA1-224ENST00000520522 DOT1LQ8TEK3 1739 aa12.45□□□□□ -0.42
CTNNA1-224ENST00000520522 SMG6Q86US8 1419 aaKnown RBP12.45□□□□□ -0.42
CTNNA1-224ENST00000520522 KIF20BQ96Q89 1820 aa12.44□□□□□ -0.42
CTNNA1-224ENST00000520522 CGNL1Q0VF96 1302 aa12.44□□□□□ -0.42
CTNNA1-224ENST00000520522 LRRC4BQ9NT99 713 aa12.44□□□□□ -0.42
CTNNA1-224ENST00000520522 UTRNP46939 3433 aa12.44□□□□□ -0.42
CTNNA1-224ENST00000520522 NSD2O96028 1365 aa12.43□□□□□ -0.42
CTNNA1-224ENST00000520522 MAP3K5Q99683 1374 aa12.43□□□□□ -0.42
CTNNA1-224ENST00000520522 RGPD2P0DJD1 1756 aa12.43□□□□□ -0.42
CTNNA1-224ENST00000520522 FBLN1P23142 703 aa12.43□□□□□ -0.42
CTNNA1-224ENST00000520522 RRS1Q15050 365 aaKnown RBP12.43□□□□□ -0.42
CTNNA1-224ENST00000520522 ZNF827Q17R98 1081 aa12.43□□□□□ -0.42
CTNNA1-224ENST00000520522 ZCRB1Q8TBF4 217 aaKnown RBP12.43□□□□□ -0.42
CTNNA1-224ENST00000520522 AKT1S1Q96B36 256 aa12.43□□□□□ -0.42
CTNNA1-224ENST00000520522 GGNBP2Q9H3C7 697 aa12.43□□□□□ -0.42
CTNNA1-224ENST00000520522 FOXD4L1Q9NU39 408 aa12.43□□□□□ -0.42
CTNNA1-224ENST00000520522 TIMELESSQ9UNS1 1208 aa12.43□□□□□ -0.42
CTNNA1-224ENST00000520522 INSRP06213 1382 aa12.43□□□□□ -0.42
CTNNA1-224ENST00000520522 FLT4P35916 1363 aa12.43□□□□□ -0.42
CTNNA1-224ENST00000520522 ZBTB22O15209 634 aa12.42□□□□□ -0.42
CTNNA1-224ENST00000520522 LY75O60449 1722 aa12.42□□□□□ -0.42
CTNNA1-224ENST00000520522 PRIM1P49642 420 aaKnown RBP12.41□□□□□ -0.42
CTNNA1-224ENST00000520522 NBPF6Q5VWK0 638 aa12.41□□□□□ -0.42
CTNNA1-224ENST00000520522 SLC16A10Q8TF71 515 aa12.41□□□□□ -0.42
CTNNA1-224ENST00000520522 NBPF4Q96M43 638 aa12.41□□□□□ -0.42
CTNNA1-224ENST00000520522 SYT17Q9BSW7 474 aa12.41□□□□□ -0.42
CTNNA1-224ENST00000520522 FHDC1Q9C0D6 1143 aaPredicted RBP12.41□□□□□ -0.42
CTNNA1-224ENST00000520522 CLSPNQ9HAW4 1339 aa12.4□□□□□ -0.42
CTNNA1-224ENST00000520522 COL24A1Q17RW2 1714 aa12.4□□□□□ -0.42
CTNNA1-224ENST00000520522 RAPGEF4Q8WZA2 1011 aa12.4□□□□□ -0.42
CTNNA1-224ENST00000520522 SYTL4Q96C24 671 aaPredicted RBP12.4□□□□□ -0.42
CTNNA1-224ENST00000520522 ARXQ96QS3 562 aa12.4□□□□□ -0.42
CTNNA1-224ENST00000520522 NSD3Q9BZ95 1437 aa12.39□□□□□ -0.43
CTNNA1-224ENST00000520522 TATP17735 454 aaPredicted RBP12.39□□□□□ -0.43
CTNNA1-224ENST00000520522 TUBGCP6Q96RT7 1819 aa12.39□□□□□ -0.43
CTNNA1-224ENST00000520522 PNPLA7Q6ZV29 1317 aa12.38□□□□□ -0.43
CTNNA1-224ENST00000520522 PCDH11XQ9BZA7 1347 aa12.38□□□□□ -0.43
CTNNA1-224ENST00000520522 PCDH11YQ9BZA8 1340 aa12.38□□□□□ -0.43
CTNNA1-224ENST00000520522 NCAPD2Q15021 1401 aa12.38□□□□□ -0.43
CTNNA1-224ENST00000520522 ANKRD26Q9UPS8 1709 aa12.38□□□□□ -0.43
CTNNA1-224ENST00000520522 USHBP1Q8N6Y0 703 aa12.38□□□□□ -0.43
CTNNA1-224ENST00000520522 HSP90AB2PQ58FF8 381 aa12.37□□□□□ -0.43
CTNNA1-224ENST00000520522 CARD14Q9BXL6 1004 aa12.37□□□□□ -0.43
CTNNA1-224ENST00000520522 CCNL1Q9UK58 526 aaPredicted RBP12.37□□□□□ -0.43
CTNNA1-224ENST00000520522 PKD1L3Q7Z443 1732 aa12.37□□□□□ -0.43
CTNNA1-224ENST00000520522 HMGB2P26583 209 aaKnown RBP12.36□□□□□ -0.43
CTNNA1-224ENST00000520522 POLD1P28340 1107 aa12.36□□□□□ -0.43
CTNNA1-224ENST00000520522 TFCP2L1Q9NZI6 479 aa12.36□□□□□ -0.43
CTNNA1-224ENST00000520522 EMILIN1Q9Y6C2 1016 aa12.35□□□□□ -0.43
CTNNA1-224ENST00000520522 KCNQ4P56696 695 aa12.34□□□□□ -0.43
CTNNA1-224ENST00000520522 CHD4Q14839 1912 aa12.34□□□□□ -0.43
CTNNA1-224ENST00000520522 C5P01031 1676 aa12.34□□□□□ -0.43
CTNNA1-224ENST00000520522 PALLDQ8WX93 1383 aa12.33□□□□□ -0.44
CTNNA1-224ENST00000520522 CYP27B1O15528 508 aa12.33□□□□□ -0.44
CTNNA1-224ENST00000520522 TOGARAM1Q9Y4F4 1720 aa12.33□□□□□ -0.44
CTNNA1-224ENST00000520522 WASHC2AQ641Q2 1341 aa12.33□□□□□ -0.44
CTNNA1-224ENST00000520522 PLEKHG2Q9H7P9 1386 aa12.32□□□□□ -0.44
CTNNA1-224ENST00000520522 NKX1-1Q15270 411 aaPredicted RBP12.31□□□□□ -0.44
CTNNA1-224ENST00000520522 ZNF784Q8NCA9 323 aaPredicted RBP12.31□□□□□ -0.44
CTNNA1-224ENST00000520522 SMARCC1Q92922 1105 aaPredicted RBP12.31□□□□□ -0.44
CTNNA1-224ENST00000520522 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.31□□□□□ -0.442e-8■□□□□ 11.2
CTNNA1-224ENST00000520522 TAF1LQ8IZX4 1826 aa12.31□□□□□ -0.44
CTNNA1-224ENST00000520522 MAP2P11137 1827 aaKnown RBP12.3□□□□□ -0.44
CTNNA1-224ENST00000520522 ITGB4P16144 1822 aa12.3□□□□□ -0.44
CTNNA1-224ENST00000520522 GOLGB1Q14789 3259 aaKnown RBP12.3□□□□□ -0.44
CTNNA1-224ENST00000520522 COL23A1Q86Y22 540 aaPredicted RBP12.3□□□□□ -0.44
CTNNA1-224ENST00000520522 FLAD1Q8NFF5 587 aa12.3□□□□□ -0.44
CTNNA1-224ENST00000520522 SPG7Q9UQ90 795 aa12.3□□□□□ -0.44
CTNNA1-224ENST00000520522 PPM1GO15355 546 aaPredicted RBP12.29□□□□□ -0.44
CTNNA1-224ENST00000520522 GPR162Q16538 588 aa12.29□□□□□ -0.44
CTNNA1-224ENST00000520522 MPRIPQ6WCQ1 1025 aa12.29□□□□□ -0.44
CTNNA1-224ENST00000520522 EYA1Q99502 592 aa12.29□□□□□ -0.44
CTNNA1-224ENST00000520522 POLKQ9UBT6 870 aa12.29□□□□□ -0.44
CTNNA1-224ENST00000520522 C4BP0C0L5 1744 aa12.28□□□□□ -0.44
CTNNA1-224ENST00000520522 KLHL34Q8N239 644 aa12.28□□□□□ -0.44
CTNNA1-224ENST00000520522 EIF4G2P78344 907 aaKnown RBP eCLIP12.27□□□□□ -0.45
CTNNA1-224ENST00000520522 NLGN2Q8NFZ4 835 aa12.27□□□□□ -0.45
CTNNA1-224ENST00000520522 PIGBQ92521 554 aa12.27□□□□□ -0.45
CTNNA1-224ENST00000520522 UBR3Q6ZT12 1888 aa12.26□□□□□ -0.45
CTNNA1-224ENST00000520522 EIF4A2Q14240 407 aaKnown RBP12.26□□□□□ -0.45
CTNNA1-224ENST00000520522 AK7Q96M32 723 aa12.26□□□□□ -0.45
CTNNA1-224ENST00000520522 PCGF6Q9BYE7 350 aa12.26□□□□□ -0.45
CTNNA1-224ENST00000520522 PHKG2P15735 406 aa12.25□□□□□ -0.45
CTNNA1-224ENST00000520522 MSL1Q68DK7 614 aa12.25□□□□□ -0.45
CTNNA1-224ENST00000520522 IFNL2Q8IZJ0 200 aa12.25□□□□□ -0.45
CTNNA1-224ENST00000520522 TMOD3Q9NYL9 352 aa12.25□□□□□ -0.45
CTNNA1-224ENST00000520522 IGSF1Q8N6C5 1336 aa12.25□□□□□ -0.45
CTNNA1-224ENST00000520522 LOC102724428A0A0B4J2F2 783 aa12.24□□□□□ -0.45
CTNNA1-224ENST00000520522 GRIN3BO60391 1043 aa12.24□□□□□ -0.45
CTNNA1-224ENST00000520522 HSPA5P11021 654 aaKnown RBP12.24□□□□□ -0.45
CTNNA1-224ENST00000520522 SSFA2P28290 1259 aa12.24□□□□□ -0.45
CTNNA1-224ENST00000520522 SIK1P57059 783 aa12.24□□□□□ -0.45
CTNNA1-224ENST00000520522 POLR3GLQ9BT43 218 aa12.24□□□□□ -0.45
CTNNA1-224ENST00000520522 CD2APQ9Y5K6 639 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms