RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 SMARCE1Q969G3 411 aa14.3□□□□□ -0.12
ERGIC1-208ENST00000520399 BCCIPQ9P287 314 aaKnown RBP eCLIP14.3□□□□□ -0.12
ERGIC1-208ENST00000520399 SRCIN1Q9C0H9 1055 aa14.29□□□□□ -0.12
ERGIC1-208ENST00000520399 STRN4Q9NRL3 753 aa14.29□□□□□ -0.12
ERGIC1-208ENST00000520399 KIAA0754O94854 1291 aa14.29□□□□□ -0.12
ERGIC1-208ENST00000520399 ZNF530Q6P9A1 599 aaPredicted RBP14.29□□□□□ -0.12
ERGIC1-208ENST00000520399 FCHSD2O94868 740 aa14.29□□□□□ -0.12
ERGIC1-208ENST00000520399 RAPGEF3O95398 923 aa14.29□□□□□ -0.12
ERGIC1-208ENST00000520399 ZNF622Q969S3 477 aaKnown RBP eCLIP14.29□□□□□ -0.12
ERGIC1-208ENST00000520399 CNNM1Q9NRU3 951 aa14.29□□□□□ -0.12
ERGIC1-208ENST00000520399 MBD3O95983 291 aa14.28□□□□□ -0.12
ERGIC1-208ENST00000520399 SLC3A2P08195 630 aaKnown RBP14.28□□□□□ -0.12
ERGIC1-208ENST00000520399 FAM107BQ9H098 131 aa14.28□□□□□ -0.12
ERGIC1-208ENST00000520399 ABCC5O15440 1437 aa14.28□□□□□ -0.12
ERGIC1-208ENST00000520399 TNNT1P13805 278 aa14.28□□□□□ -0.12
ERGIC1-208ENST00000520399 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.28□□□□□ -0.12
ERGIC1-208ENST00000520399 MAGEC2Q9UBF1 373 aaPredicted RBP14.28□□□□□ -0.12
ERGIC1-208ENST00000520399 ZNF396Q96N95 335 aaPredicted RBP14.28□□□□□ -0.12
ERGIC1-208ENST00000520399 TSPY26PQ9H489 355 aa14.28□□□□□ -0.12
ERGIC1-208ENST00000520399 FAM177BA6PVY3 158 aa14.28□□□□□ -0.12
ERGIC1-208ENST00000520399 CCAR1Q8IX12 1150 aaKnown RBP14.28□□□□□ -0.12
ERGIC1-208ENST00000520399 PDCP20941 246 aa14.27□□□□□ -0.12
ERGIC1-208ENST00000520399 CHD1LQ86WJ1 897 aa14.27□□□□□ -0.12
ERGIC1-208ENST00000520399 RRS1Q15050 365 aaKnown RBP14.27□□□□□ -0.12
ERGIC1-208ENST00000520399 KDM4AO75164 1064 aa14.27□□□□□ -0.13
ERGIC1-208ENST00000520399 GBP2P32456 591 aaPredicted RBP14.27□□□□□ -0.13
ERGIC1-208ENST00000520399 NEBLO76041 1014 aa14.26□□□□□ -0.13
ERGIC1-208ENST00000520399 ANKLE2Q86XL3 938 aa14.26□□□□□ -0.13
ERGIC1-208ENST00000520399 GNL3LQ9NVN8 582 aaKnown RBP14.26□□□□□ -0.13
ERGIC1-208ENST00000520399 NFE2L2Q16236 605 aa14.26□□□□□ -0.13
ERGIC1-208ENST00000520399 CYP46A1Q9Y6A2 500 aa14.26□□□□□ -0.13
ERGIC1-208ENST00000520399 SDF4Q9BRK5 362 aa14.26□□□□□ -0.13
ERGIC1-208ENST00000520399 SLFN5Q08AF3 891 aa14.26□□□□□ -0.13
ERGIC1-208ENST00000520399 ANKRD1Q15327 319 aa14.26□□□□□ -0.13
ERGIC1-208ENST00000520399 PPP4R3BQ5MIZ7 849 aa14.26□□□□□ -0.13
ERGIC1-208ENST00000520399 TOM1L2Q6ZVM7 507 aa14.26□□□□□ -0.13
ERGIC1-208ENST00000520399 KLHL34Q8N239 644 aa14.26□□□□□ -0.13
ERGIC1-208ENST00000520399 CCDC112Q8NEF3 446 aa14.26□□□□□ -0.13
ERGIC1-208ENST00000520399 BTBD11A6QL63 1104 aa14.25□□□□□ -0.13
ERGIC1-208ENST00000520399 PRPF40AO75400 957 aaKnown RBP14.25□□□□□ -0.13
ERGIC1-208ENST00000520399 DESP17661 470 aa14.25□□□□□ -0.13
ERGIC1-208ENST00000520399 CDK5RAP3Q96JB5 506 aa14.25□□□□□ -0.13
ERGIC1-208ENST00000520399 FILIP1LQ4L180 1135 aa14.25□□□□□ -0.13
ERGIC1-208ENST00000520399 TTLL5Q6EMB2 1281 aa14.25□□□□□ -0.13
ERGIC1-208ENST00000520399 TXLNBQ8N3L3 684 aa14.25□□□□□ -0.13
ERGIC1-208ENST00000520399 BACH2Q9BYV9 841 aa14.25□□□□□ -0.13
ERGIC1-208ENST00000520399 GRIN2AQ12879 1464 aa14.25□□□□□ -0.13
ERGIC1-208ENST00000520399 CCDC184Q52MB2 194 aa14.24□□□□□ -0.13
ERGIC1-208ENST00000520399 ZNF428Q96B54 188 aa14.24□□□□□ -0.13
ERGIC1-208ENST00000520399 K7ELQ4 463 aaPredicted RBP14.24□□□□□ -0.13
ERGIC1-208ENST00000520399 MAP4K4O95819 1239 aaPredicted RBP14.24□□□□□ -0.13
ERGIC1-208ENST00000520399 DDX11Q96FC9 970 aa14.24□□□□□ -0.13
ERGIC1-208ENST00000520399 MYL6BP14649 208 aa14.24□□□□□ -0.13
ERGIC1-208ENST00000520399 PIP4K2AP48426 406 aaPredicted RBP14.24□□□□□ -0.13
ERGIC1-208ENST00000520399 IKQ13123 557 aaPredicted RBP14.24□□□□□ -0.13
ERGIC1-208ENST00000520399 CCDC94Q9BW85 323 aaPredicted RBP14.24□□□□□ -0.13
ERGIC1-208ENST00000520399 SIL1Q9H173 461 aa14.24□□□□□ -0.13
ERGIC1-208ENST00000520399 MTMR7Q9Y216 660 aa14.24□□□□□ -0.13
ERGIC1-208ENST00000520399 KINO60870 393 aaKnown RBP14.24□□□□□ -0.13
ERGIC1-208ENST00000520399 NUDT16Q96DE0 195 aaKnown RBP14.24□□□□□ -0.13
ERGIC1-208ENST00000520399 PLB1Q6P1J6 1458 aa14.24□□□□□ -0.13
ERGIC1-208ENST00000520399 ADGRL1O94910 1474 aa14.23□□□□□ -0.13
ERGIC1-208ENST00000520399 TMPOP42166 694 aaKnown RBP14.23□□□□□ -0.13
ERGIC1-208ENST00000520399 BIVM-ERCC5R4GMW8 1640 aa14.23□□□□□ -0.13
ERGIC1-208ENST00000520399 GNAT3A8MTJ3 354 aa14.22□□□□□ -0.13
ERGIC1-208ENST00000520399 AEBP2Q6ZN18 517 aaPredicted RBP14.22□□□□□ -0.13
ERGIC1-208ENST00000520399 CCDC91Q7Z6B0 441 aa14.22□□□□□ -0.13
ERGIC1-208ENST00000520399 RNF214Q8ND24 703 aa14.22□□□□□ -0.13
ERGIC1-208ENST00000520399 ZSCAN25Q6NSZ9 544 aa14.22□□□□□ -0.13
ERGIC1-208ENST00000520399 LUC7LQ9NQ29 371 aaKnown RBP14.22□□□□□ -0.13
ERGIC1-208ENST00000520399 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.22□□□□□ -0.13
ERGIC1-208ENST00000520399 EIF3JO75822 258 aaKnown RBP14.22□□□□□ -0.13
ERGIC1-208ENST00000520399 KRT18P05783 430 aaKnown RBP14.22□□□□□ -0.13
ERGIC1-208ENST00000520399 SARNPP82979 210 aaKnown RBP14.22□□□□□ -0.13
ERGIC1-208ENST00000520399 AACSQ86V21 672 aa14.22□□□□□ -0.13
ERGIC1-208ENST00000520399 DDX54Q8TDD1 881 aaKnown RBP14.22□□□□□ -0.13
ERGIC1-208ENST00000520399 SLC26A8Q96RN1 970 aa14.22□□□□□ -0.13
ERGIC1-208ENST00000520399 CD109Q6YHK3 1445 aa14.21□□□□□ -0.13
ERGIC1-208ENST00000520399 MCM5P33992 734 aa14.21□□□□□ -0.13
ERGIC1-208ENST00000520399 BICRAQ9NZM4 1560 aa14.21□□□□□ -0.13
ERGIC1-208ENST00000520399 STAMBPO95630 424 aa14.21□□□□□ -0.13
ERGIC1-208ENST00000520399 STK38Q15208 465 aa14.21□□□□□ -0.14
ERGIC1-208ENST00000520399 TRIM5Q9C035 493 aa14.21□□□□□ -0.14
ERGIC1-208ENST00000520399 SMC2O95347 1197 aa14.2□□□□□ -0.14
ERGIC1-208ENST00000520399 PPM1FP49593 454 aaPredicted RBP14.2□□□□□ -0.14
ERGIC1-208ENST00000520399 WDR33Q9C0J8 1336 aaKnown RBP14.2□□□□□ -0.14
ERGIC1-208ENST00000520399 SETSIPP0DME0 302 aa14.2□□□□□ -0.14
ERGIC1-208ENST00000520399 TXLNAP40222 546 aa14.2□□□□□ -0.14
ERGIC1-208ENST00000520399 CCDC57Q2TAC2 916 aa14.2□□□□□ -0.14
ERGIC1-208ENST00000520399 RPAP2Q8IXW5 612 aaPredicted RBP14.2□□□□□ -0.14
ERGIC1-208ENST00000520399 NACAP1Q9BZK3 213 aa14.2□□□□□ -0.14
ERGIC1-208ENST00000520399 VGLL3A8MV65 326 aa14.2□□□□□ -0.14
ERGIC1-208ENST00000520399 FIBPO43427 364 aa14.2□□□□□ -0.14
ERGIC1-208ENST00000520399 BANK1Q8NDB2 785 aa14.2□□□□□ -0.14
ERGIC1-208ENST00000520399 ZNHIT6Q9NWK9 470 aaKnown RBP14.2□□□□□ -0.14
ERGIC1-208ENST00000520399 RBM25P49756 843 aaKnown RBP14.19□□□□□ -0.14
ERGIC1-208ENST00000520399 STK3Q13188 491 aa14.19□□□□□ -0.14
ERGIC1-208ENST00000520399 CCDC69A6NI79 296 aa14.19□□□□□ -0.14
ERGIC1-208ENST00000520399 SRGAP3O43295 1099 aa14.19□□□□□ -0.14
ERGIC1-208ENST00000520399 TMCO5BA8MYB1 307 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms