RNA–Protein interactions for RNA: ENST00000520362.5

EFR3A-204, Transcript of EFR3 homolog A, humanhuman

TSL 3

Gene EFR3A, Length 477 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-204ENST00000520362 KNSTRNQ9Y448 316 aa18.8■□□□□ 0.6
EFR3A-204ENST00000520362 MEGF6O75095 1541 aa18.79■□□□□ 0.6
EFR3A-204ENST00000520362 PDGFDQ9GZP0 370 aaPredicted RBP18.79■□□□□ 0.6
EFR3A-204ENST00000520362 NUP188Q5SRE5 1749 aa18.79■□□□□ 0.6
EFR3A-204ENST00000520362 RREB1Q92766 1687 aa18.79■□□□□ 0.6
EFR3A-204ENST00000520362 LRP5O75197 1615 aa18.78■□□□□ 0.6
EFR3A-204ENST00000520362 WASHC2AQ641Q2 1341 aa18.78■□□□□ 0.6
EFR3A-204ENST00000520362 SRCAPQ6ZRS2 3230 aa18.78■□□□□ 0.6
EFR3A-204ENST00000520362 PCDH11XQ9BZA7 1347 aa18.77■□□□□ 0.6
EFR3A-204ENST00000520362 PCDH11YQ9BZA8 1340 aa18.77■□□□□ 0.6
EFR3A-204ENST00000520362 KCNQ4P56696 695 aa18.77■□□□□ 0.6
EFR3A-204ENST00000520362 SBF2Q86WG5 1849 aa18.77■□□□□ 0.59
EFR3A-204ENST00000520362 DCAF8L1A6NGE4 600 aa18.76■□□□□ 0.59
EFR3A-204ENST00000520362 EYA1Q99502 592 aa18.76■□□□□ 0.59
EFR3A-204ENST00000520362 LRRC4BQ9NT99 713 aa18.76■□□□□ 0.59
EFR3A-204ENST00000520362 SPG7Q9UQ90 795 aa18.76■□□□□ 0.59
EFR3A-204ENST00000520362 KAT6BQ8WYB5 2073 aa18.75■□□□□ 0.59
EFR3A-204ENST00000520362 KIF20BQ96Q89 1820 aa18.75■□□□□ 0.59
EFR3A-204ENST00000520362 SLC27A3Q5K4L6 730 aa18.75■□□□□ 0.59
EFR3A-204ENST00000520362 MYOM1P52179 1685 aa18.75■□□□□ 0.59
EFR3A-204ENST00000520362 FAM208AQ9UK61 1670 aaKnown RBP18.74■□□□□ 0.59
EFR3A-204ENST00000520362 CNGB1Q14028 1251 aaPredicted RBP18.74■□□□□ 0.59
EFR3A-204ENST00000520362 MPRIPQ6WCQ1 1025 aa18.74■□□□□ 0.59
EFR3A-204ENST00000520362 CCNL1Q9UK58 526 aaPredicted RBP18.74■□□□□ 0.59
EFR3A-204ENST00000520362 MSH5O43196 834 aa18.73■□□□□ 0.59
EFR3A-204ENST00000520362 EIF4A2Q14240 407 aaKnown RBP18.73■□□□□ 0.59
EFR3A-204ENST00000520362 TFCP2L1Q9NZI6 479 aa18.73■□□□□ 0.59
EFR3A-204ENST00000520362 NHSQ6T4R5 1651 aa18.73■□□□□ 0.59
EFR3A-204ENST00000520362 CYP27B1O15528 508 aa18.72■□□□□ 0.59
EFR3A-204ENST00000520362 ZNF827Q17R98 1081 aa18.72■□□□□ 0.59
EFR3A-204ENST00000520362 MTFR1LQ9H019 292 aa18.71■□□□□ 0.59
EFR3A-204ENST00000520362 KIF7Q2M1P5 1343 aa18.71■□□□□ 0.59
EFR3A-204ENST00000520362 NSD2O96028 1365 aa18.69■□□□□ 0.58
EFR3A-204ENST00000520362 RGPD3A6NKT7 1758 aaPredicted RBP18.69■□□□□ 0.58
EFR3A-204ENST00000520362 RGPD2P0DJD1 1756 aa18.69■□□□□ 0.58
EFR3A-204ENST00000520362 RGPD4Q7Z3J3 1758 aa18.69■□□□□ 0.58
EFR3A-204ENST00000520362 AKT1S1Q96B36 256 aa18.68■□□□□ 0.58
EFR3A-204ENST00000520362 IFNL2Q8IZJ0 200 aa18.67■□□□□ 0.58
EFR3A-204ENST00000520362 KLHL34Q8N239 644 aa18.67■□□□□ 0.58
EFR3A-204ENST00000520362 BTAF1O14981 1849 aa18.66■□□□□ 0.58
EFR3A-204ENST00000520362 PTGER2P43116 358 aa18.66■□□□□ 0.58
EFR3A-204ENST00000520362 CC2D1BQ5T0F9 858 aaKnown RBP18.66■□□□□ 0.58
EFR3A-204ENST00000520362 SMARCC1Q92922 1105 aaPredicted RBP18.66■□□□□ 0.58
EFR3A-204ENST00000520362 PLEKHO1Q53GL0 409 aaPredicted RBP18.65■□□□□ 0.58
EFR3A-204ENST00000520362 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.65■□□□□ 0.58
EFR3A-204ENST00000520362 TMOD3Q9NYL9 352 aa18.65■□□□□ 0.58
EFR3A-204ENST00000520362 POLD1P28340 1107 aa18.64■□□□□ 0.57
EFR3A-204ENST00000520362 PIGBQ92521 554 aa18.64■□□□□ 0.57
EFR3A-204ENST00000520362 ARXQ96QS3 562 aa18.64■□□□□ 0.57
EFR3A-204ENST00000520362 PALLDQ8WX93 1383 aa18.64■□□□□ 0.57
EFR3A-204ENST00000520362 PHKG2P15735 406 aa18.63■□□□□ 0.57
EFR3A-204ENST00000520362 HMGB2P26583 209 aaKnown RBP18.63■□□□□ 0.57
EFR3A-204ENST00000520362 FHDC1Q9C0D6 1143 aaPredicted RBP18.63■□□□□ 0.57
EFR3A-204ENST00000520362 NKX1-1Q15270 411 aaPredicted RBP18.62■□□□□ 0.57
EFR3A-204ENST00000520362 AMER1Q5JTC6 1135 aaPredicted RBP18.62■□□□□ 0.57
EFR3A-204ENST00000520362 ZNF530Q6P9A1 599 aaPredicted RBP18.62■□□□□ 0.57
EFR3A-204ENST00000520362 SLC16A10Q8TF71 515 aa18.62■□□□□ 0.57
EFR3A-204ENST00000520362 PNPLA7Q6ZV29 1317 aa18.62■□□□□ 0.57
EFR3A-204ENST00000520362 IGSF1Q8N6C5 1336 aa18.61■□□□□ 0.57
EFR3A-204ENST00000520362 SULT6B1Q6IMI4 303 aa18.61■□□□□ 0.57
EFR3A-204ENST00000520362 DOT1LQ8TEK3 1739 aa18.6■□□□□ 0.57
EFR3A-204ENST00000520362 MTHFSP49914 203 aa18.6■□□□□ 0.57
EFR3A-204ENST00000520362 AMOTQ4VCS5 1084 aa18.6■□□□□ 0.57
EFR3A-204ENST00000520362 C1orf141Q5JVX7 400 aa18.6■□□□□ 0.57
EFR3A-204ENST00000520362 AEBP1Q8IUX7 1158 aa18.6■□□□□ 0.57
EFR3A-204ENST00000520362 AK7Q96M32 723 aa18.6■□□□□ 0.57
EFR3A-204ENST00000520362 HSP90AB1P08238 724 aaKnown RBP18.59■□□□□ 0.57
EFR3A-204ENST00000520362 SYT17Q9BSW7 474 aa18.59■□□□□ 0.57
EFR3A-204ENST00000520362 MAP2P11137 1827 aaKnown RBP18.58■□□□□ 0.57
EFR3A-204ENST00000520362 MSL1Q68DK7 614 aa18.58■□□□□ 0.56
EFR3A-204ENST00000520362 COL23A1Q86Y22 540 aaPredicted RBP18.58■□□□□ 0.56
EFR3A-204ENST00000520362 ASAP1Q9ULH1 1129 aa18.58■□□□□ 0.56
EFR3A-204ENST00000520362 NCAPD2Q15021 1401 aa18.57■□□□□ 0.56
EFR3A-204ENST00000520362 PHF14O94880 888 aa18.57■□□□□ 0.56
EFR3A-204ENST00000520362 CABP4P57796 275 aa18.57■□□□□ 0.56
EFR3A-204ENST00000520362 CASZ1Q86V15 1759 aa18.56■□□□□ 0.56
EFR3A-204ENST00000520362 LOC102724428A0A0B4J2F2 783 aa18.56■□□□□ 0.56
EFR3A-204ENST00000520362 YY1P25490 414 aa18.56■□□□□ 0.56
EFR3A-204ENST00000520362 IL13P35225 146 aa18.56■□□□□ 0.56
EFR3A-204ENST00000520362 ATP6V1AP38606 617 aa18.56■□□□□ 0.56
EFR3A-204ENST00000520362 SIK1P57059 783 aa18.56■□□□□ 0.56
EFR3A-204ENST00000520362 PELP1Q8IZL8 1130 aaKnown RBP18.56■□□□□ 0.56
EFR3A-204ENST00000520362 FLAD1Q8NFF5 587 aa18.56■□□□□ 0.56
EFR3A-204ENST00000520362 DCAF5Q96JK2 942 aa18.56■□□□□ 0.56
EFR3A-204ENST00000520362 SGIP1Q9BQI5 828 aa18.56■□□□□ 0.56
EFR3A-204ENST00000520362 RBM42Q9BTD8 480 aaKnown RBP18.56■□□□□ 0.56
EFR3A-204ENST00000520362 SHANK3Q9BYB0 1731 aa18.55■□□□□ 0.56
EFR3A-204ENST00000520362 PER1O15534 1290 aaPredicted RBP18.55■□□□□ 0.56
EFR3A-204ENST00000520362 HMOX1P09601 288 aa18.55■□□□□ 0.56
EFR3A-204ENST00000520362 ERVV-2B6SEH9 535 aa18.54■□□□□ 0.56
EFR3A-204ENST00000520362 DIAPH1O60610 1272 aaKnown RBP18.54■□□□□ 0.56
EFR3A-204ENST00000520362 ATG3Q9NT62 314 aa18.54■□□□□ 0.56
EFR3A-204ENST00000520362 PAPPAQ13219 1627 aa18.53■□□□□ 0.56
EFR3A-204ENST00000520362 ANKRD26Q9UPS8 1709 aa18.52■□□□□ 0.56
EFR3A-204ENST00000520362 U2SURPO15042 1029 aaKnown RBP18.52■□□□□ 0.56
EFR3A-204ENST00000520362 GPR162Q16538 588 aa18.52■□□□□ 0.56
EFR3A-204ENST00000520362 SMIM5Q71RC9 77 aa18.52■□□□□ 0.56
EFR3A-204ENST00000520362 LINC00116Q8NCU8 138 aa18.51■□□□□ 0.55
EFR3A-204ENST00000520362 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.5■□□□□ 0.55
EFR3A-204ENST00000520362 GNPATO15228 680 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms