RNA–Protein interactions for RNA: ENST00000520348.5

SNHG6-201, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2 BASIC

Gene SNHG6, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-201ENST00000520348 ZNF428Q96B54 188 aa20.79■□□□□ 0.92
SNHG6-201ENST00000520348 CEMIPQ8WUJ3 1361 aa20.79■□□□□ 0.92
SNHG6-201ENST00000520348 CHL1O00533 1208 aa20.78■□□□□ 0.92
SNHG6-201ENST00000520348 DCTN1Q14203 1278 aa20.78■□□□□ 0.92
SNHG6-201ENST00000520348 AMOTQ4VCS5 1084 aa20.78■□□□□ 0.92
SNHG6-201ENST00000520348 MBIPQ9NS73 344 aa20.78■□□□□ 0.92
SNHG6-201ENST00000520348 PPP4R2Q9NY27 417 aa20.78■□□□□ 0.92
SNHG6-201ENST00000520348 COL14A1Q05707 1796 aaKnown RBP20.77■□□□□ 0.92
SNHG6-201ENST00000520348 GNAT3A8MTJ3 354 aa20.77■□□□□ 0.92
SNHG6-201ENST00000520348 PLEKHG5O94827 1062 aa20.77■□□□□ 0.92
SNHG6-201ENST00000520348 CHRNA2Q15822 529 aa20.77■□□□□ 0.92
SNHG6-201ENST00000520348 TOM1O60784 492 aa20.76■□□□□ 0.91
SNHG6-201ENST00000520348 BCAR3O75815 825 aa20.76■□□□□ 0.91
SNHG6-201ENST00000520348 MCM10Q7L590 875 aa20.76■□□□□ 0.91
SNHG6-201ENST00000520348 PRDM11Q9NQV5 511 aa20.76■□□□□ 0.91
SNHG6-201ENST00000520348 WDR17Q8IZU2 1322 aa20.76■□□□□ 0.91
SNHG6-201ENST00000520348 MEGF6O75095 1541 aa20.75■□□□□ 0.91
SNHG6-201ENST00000520348 BRPF1P55201 1214 aaPredicted RBP20.75■□□□□ 0.91
SNHG6-201ENST00000520348 PLEKHO1Q53GL0 409 aaPredicted RBP20.75■□□□□ 0.91
SNHG6-201ENST00000520348 RTF1Q92541 710 aaKnown RBP20.75■□□□□ 0.91
SNHG6-201ENST00000520348 BABAM1Q9NWV8 329 aa20.75■□□□□ 0.91
SNHG6-201ENST00000520348 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.74■□□□□ 0.915e-10■□□□□ 10.5
SNHG6-201ENST00000520348 PLIN1O60240 522 aa20.73■□□□□ 0.91
SNHG6-201ENST00000520348 ALDH1L2Q3SY69 923 aa20.73■□□□□ 0.91
SNHG6-201ENST00000520348 PARP4Q9UKK3 1724 aaKnown RBP20.73■□□□□ 0.91
SNHG6-201ENST00000520348 PDE3AQ14432 1141 aa20.72■□□□□ 0.91
SNHG6-201ENST00000520348 AKAP4Q5JQC9 854 aa20.72■□□□□ 0.91
SNHG6-201ENST00000520348 IL17REQ8NFR9 667 aa20.72■□□□□ 0.91
SNHG6-201ENST00000520348 VAMP4O75379 141 aa20.71■□□□□ 0.91
SNHG6-201ENST00000520348 KDM3BQ7LBC6 1761 aa20.7■□□□□ 0.9
SNHG6-201ENST00000520348 C20orf194Q5TEA3 1177 aa20.7■□□□□ 0.9
SNHG6-201ENST00000520348 NLRP2Q9NX02 1062 aa20.7■□□□□ 0.9
SNHG6-201ENST00000520348 SIPA1L3O60292 1781 aaPredicted RBP20.69■□□□□ 0.9
SNHG6-201ENST00000520348 ZNF530Q6P9A1 599 aaPredicted RBP20.69■□□□□ 0.9
SNHG6-201ENST00000520348 EXOC6Q8TAG9 804 aa20.69■□□□□ 0.9
SNHG6-201ENST00000520348 SSH1Q8WYL5 1049 aa20.69■□□□□ 0.9
SNHG6-201ENST00000520348 LAS1LQ9Y4W2 734 aaKnown RBP20.69■□□□□ 0.9
SNHG6-201ENST00000520348 VIRMAQ69YN4 1812 aaKnown RBP20.69■□□□□ 0.9
SNHG6-201ENST00000520348 HAP1P54257 671 aaPredicted RBP20.68■□□□□ 0.9
SNHG6-201ENST00000520348 CRBNQ96SW2 442 aa20.68■□□□□ 0.9
SNHG6-201ENST00000520348 CARD10Q9BWT7 1032 aa20.68■□□□□ 0.9
SNHG6-201ENST00000520348 MRC1P22897 1456 aa20.68■□□□□ 0.9
SNHG6-201ENST00000520348 PLCH1Q4KWH8 1693 aa20.67■□□□□ 0.9
SNHG6-201ENST00000520348 CSB-PGBD3P0DP91 1061 aa20.67■□□□□ 0.9
SNHG6-201ENST00000520348 TATP17735 454 aaPredicted RBP20.67■□□□□ 0.9
SNHG6-201ENST00000520348 RAPGEF4Q8WZA2 1011 aa20.67■□□□□ 0.9
SNHG6-201ENST00000520348 TWISTNBQ3B726 338 aaPredicted RBP20.66■□□□□ 0.9
SNHG6-201ENST00000520348 TSPYL6Q8N831 410 aa20.66■□□□□ 0.9
SNHG6-201ENST00000520348 C8orf58Q8NAV2 365 aa20.66■□□□□ 0.9
SNHG6-201ENST00000520348 SOS1Q07889 1333 aaPredicted RBP20.66■□□□□ 0.9
SNHG6-201ENST00000520348 KIF16BQ96L93 1317 aa20.66■□□□□ 0.9
SNHG6-201ENST00000520348 NRAPQ86VF7 1730 aa20.66■□□□□ 0.9
SNHG6-201ENST00000520348 SCN11AQ9UI33 1791 aa20.66■□□□□ 0.9
SNHG6-201ENST00000520348 SMC4Q9NTJ3 1288 aa20.65■□□□□ 0.9
SNHG6-201ENST00000520348 TAF7Q15545 349 aaPredicted RBP20.64■□□□□ 0.89
SNHG6-201ENST00000520348 SHANK3Q9BYB0 1731 aa20.64■□□□□ 0.89
SNHG6-201ENST00000520348 KDM6AO15550 1401 aaPredicted RBP20.63■□□□□ 0.89
SNHG6-201ENST00000520348 UBAP1LF5GYI3 381 aa20.63■□□□□ 0.89
SNHG6-201ENST00000520348 RNMTO43148 476 aaKnown RBP20.63■□□□□ 0.89
SNHG6-201ENST00000520348 C1orf141Q5JVX7 400 aa20.63■□□□□ 0.89
SNHG6-201ENST00000520348 TSPYL4Q9UJ04 414 aa20.63■□□□□ 0.89
SNHG6-201ENST00000520348 SPG7Q9UQ90 795 aa20.63■□□□□ 0.89
SNHG6-201ENST00000520348 DISP2A7MBM2 1401 aa20.62■□□□□ 0.89
SNHG6-201ENST00000520348 NWD2Q9ULI1 1742 aa20.62■□□□□ 0.89
SNHG6-201ENST00000520348 ZKSCAN2Q63HK3 967 aa20.62■□□□□ 0.89
SNHG6-201ENST00000520348 MRPL50Q8N5N7 158 aaKnown RBP20.62■□□□□ 0.89
SNHG6-201ENST00000520348 CERKQ8TCT0 537 aa20.62■□□□□ 0.89
SNHG6-201ENST00000520348 BCL2L13Q9BXK5 485 aa20.62■□□□□ 0.89
SNHG6-201ENST00000520348 PHKG2P15735 406 aa20.61■□□□□ 0.89
SNHG6-201ENST00000520348 LGR6Q9HBX8 967 aa20.61■□□□□ 0.89
SNHG6-201ENST00000520348 WNK3Q9BYP7 1800 aa20.61■□□□□ 0.89
SNHG6-201ENST00000520348 MS4A1P11836 297 aa20.6■□□□□ 0.89
SNHG6-201ENST00000520348 TOM1L2Q6ZVM7 507 aa20.6■□□□□ 0.89
SNHG6-201ENST00000520348 ARHGAP45Q92619 1136 aa20.6■□□□□ 0.89
SNHG6-201ENST00000520348 PIP4K2BP78356 416 aa20.59■□□□□ 0.89
SNHG6-201ENST00000520348 AAMPQ13685 434 aa20.59■□□□□ 0.89
SNHG6-201ENST00000520348 LARP1Q6PKG0 1096 aaKnown RBP20.59■□□□□ 0.89
SNHG6-201ENST00000520348 SLIT2O94813 1529 aa20.58■□□□□ 0.89
SNHG6-201ENST00000520348 KRT24Q2M2I5 525 aa20.58■□□□□ 0.89
SNHG6-201ENST00000520348 B4GALNT3Q6L9W6 998 aa20.58■□□□□ 0.89
SNHG6-201ENST00000520348 ATF7IPQ6VMQ6 1270 aa20.58■□□□□ 0.89
SNHG6-201ENST00000520348 IFNL2Q8IZJ0 200 aa20.58■□□□□ 0.89
SNHG6-201ENST00000520348 JCADQ9P266 1359 aa20.58■□□□□ 0.88
SNHG6-201ENST00000520348 IPO8O15397 1037 aaKnown RBP20.57■□□□□ 0.88
SNHG6-201ENST00000520348 CYP27B1O15528 508 aa20.57■□□□□ 0.88
SNHG6-201ENST00000520348 RLBP1P12271 317 aa20.57■□□□□ 0.88
SNHG6-201ENST00000520348 TRIM27P14373 513 aa20.57■□□□□ 0.88
SNHG6-201ENST00000520348 CANXP27824 592 aaKnown RBP20.57■□□□□ 0.88
SNHG6-201ENST00000520348 MPRIPQ6WCQ1 1025 aa20.57■□□□□ 0.88
SNHG6-201ENST00000520348 FRAT1Q92837 279 aaPredicted RBP20.57■□□□□ 0.88
SNHG6-201ENST00000520348 BTG4Q9NY30 223 aa20.57■□□□□ 0.88
SNHG6-201ENST00000520348 MIS18AQ9NYP9 233 aa20.57■□□□□ 0.88
SNHG6-201ENST00000520348 HEG1Q9ULI3 1381 aa20.57■□□□□ 0.88
SNHG6-201ENST00000520348 HSP90AB1P08238 724 aaKnown RBP20.56■□□□□ 0.88
SNHG6-201ENST00000520348 IL2RBP14784 551 aa20.56■□□□□ 0.88
SNHG6-201ENST00000520348 PANK1Q8TE04 598 aa20.56■□□□□ 0.88
SNHG6-201ENST00000520348 NOB1Q9ULX3 412 aaKnown RBP20.56■□□□□ 0.88
SNHG6-201ENST00000520348 TNNQ9UQP3 1299 aa20.56■□□□□ 0.88
SNHG6-201ENST00000520348 PCDH11XQ9BZA7 1347 aa20.55■□□□□ 0.88
SNHG6-201ENST00000520348 PCDH11YQ9BZA8 1340 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms