RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 MSS51Q4VC12 460 aa11.26□□□□□ -0.61
CTHRC1-203ENST00000520337 ZNF598Q86UK7 904 aaKnown RBP11.26□□□□□ -0.61
CTHRC1-203ENST00000520337 EMID1Q96A84 441 aaPredicted RBP11.26□□□□□ -0.61
CTHRC1-203ENST00000520337 WASHC2CQ9Y4E1 1318 aa11.26□□□□□ -0.61
CTHRC1-203ENST00000520337 CLTCL1P53675 1640 aa11.25□□□□□ -0.61
CTHRC1-203ENST00000520337 PDZRN3Q9UPQ7 1066 aa11.25□□□□□ -0.61
CTHRC1-203ENST00000520337 CCDC144AA2RUR9 1427 aa11.25□□□□□ -0.61
CTHRC1-203ENST00000520337 NPATQ14207 1427 aa11.25□□□□□ -0.61
CTHRC1-203ENST00000520337 CLTCQ00610 1675 aaKnown RBP11.24□□□□□ -0.61
CTHRC1-203ENST00000520337 KIF1BO60333 1816 aa11.24□□□□□ -0.61
CTHRC1-203ENST00000520337 AMHR2Q16671 573 aa11.24□□□□□ -0.61
CTHRC1-203ENST00000520337 ZNF787Q6DD87 383 aa11.24□□□□□ -0.61
CTHRC1-203ENST00000520337 ARHGAP31Q2M1Z3 1444 aa11.24□□□□□ -0.61
CTHRC1-203ENST00000520337 LIAT1Q6ZQX7 453 aa11.23□□□□□ -0.61
CTHRC1-203ENST00000520337 FAM160A2Q8N612 972 aaPredicted RBP11.23□□□□□ -0.61
CTHRC1-203ENST00000520337 HOXA2O43364 376 aa11.22□□□□□ -0.61
CTHRC1-203ENST00000520337 RNF19BQ6ZMZ0 732 aa11.22□□□□□ -0.61
CTHRC1-203ENST00000520337 SPATA31E1Q6ZUB1 1445 aa11.22□□□□□ -0.61
CTHRC1-203ENST00000520337 PREX1Q8TCU6 1659 aa11.21□□□□□ -0.61
CTHRC1-203ENST00000520337 UGGT1Q9NYU2 1555 aa11.21□□□□□ -0.61
CTHRC1-203ENST00000520337 NOS1P29475 1434 aa11.21□□□□□ -0.61
CTHRC1-203ENST00000520337 PRR20EP86478 221 aa11.21□□□□□ -0.61
CTHRC1-203ENST00000520337 PRR20CP86479 221 aa11.21□□□□□ -0.61
CTHRC1-203ENST00000520337 PRR20DP86480 221 aa11.21□□□□□ -0.61
CTHRC1-203ENST00000520337 PRR20BP86481 221 aa11.21□□□□□ -0.61
CTHRC1-203ENST00000520337 PRR20AP86496 221 aa11.21□□□□□ -0.61
CTHRC1-203ENST00000520337 NBPF8Q3BBV2 869 aa11.21□□□□□ -0.61
CTHRC1-203ENST00000520337 PLA2G2CQ5R387 149 aa11.21□□□□□ -0.61
CTHRC1-203ENST00000520337 PIK3C2BO00750 1634 aa11.2□□□□□ -0.62
CTHRC1-203ENST00000520337 NEURL4Q96JN8 1562 aa11.2□□□□□ -0.62
CTHRC1-203ENST00000520337 RPIAP49247 311 aa11.2□□□□□ -0.62
CTHRC1-203ENST00000520337 ZNF775Q96BV0 537 aaPredicted RBP11.2□□□□□ -0.62
CTHRC1-203ENST00000520337 FCF1Q9Y324 198 aaKnown RBP11.2□□□□□ -0.62
CTHRC1-203ENST00000520337 SYNMO15061 1565 aa11.2□□□□□ -0.62
CTHRC1-203ENST00000520337 CNTLNQ9NXG0 1405 aa11.19□□□□□ -0.62
CTHRC1-203ENST00000520337 MLECQ14165 292 aa11.19□□□□□ -0.62
CTHRC1-203ENST00000520337 TTLL12Q14166 644 aaPredicted RBP11.19□□□□□ -0.62
CTHRC1-203ENST00000520337 ZNF697Q5TEC3 545 aa11.19□□□□□ -0.62
CTHRC1-203ENST00000520337 NUTM1Q86Y26 1132 aa11.19□□□□□ -0.62
CTHRC1-203ENST00000520337 REPIN1Q9BWE0 567 aaKnown RBP11.19□□□□□ -0.62
CTHRC1-203ENST00000520337 UHRF1BP1Q6BDS2 1440 aa11.18□□□□□ -0.62
CTHRC1-203ENST00000520337 MROH2AA6NES4 1674 aa11.18□□□□□ -0.62
CTHRC1-203ENST00000520337 SSTR3P32745 418 aaPredicted RBP11.18□□□□□ -0.62
CTHRC1-203ENST00000520337 TRIM67Q6ZTA4 783 aa11.18□□□□□ -0.62
CTHRC1-203ENST00000520337 USB1Q9BQ65 265 aaKnown RBP11.18□□□□□ -0.62
CTHRC1-203ENST00000520337 MYO5BQ9ULV0 1848 aa11.18□□□□□ -0.62
CTHRC1-203ENST00000520337 IFT172Q9UG01 1749 aa11.18□□□□□ -0.62
CTHRC1-203ENST00000520337 MMP16P51512 607 aa11.17□□□□□ -0.62
CTHRC1-203ENST00000520337 RGL3Q3MIN7 710 aa11.17□□□□□ -0.62
CTHRC1-203ENST00000520337 PRDM9Q9NQV7 894 aa11.17□□□□□ -0.62
CTHRC1-203ENST00000520337 ARID4BQ4LE39 1312 aaPredicted RBP11.16□□□□□ -0.62
CTHRC1-203ENST00000520337 FBXO31Q5XUX0 539 aaPredicted RBP11.16□□□□□ -0.62
CTHRC1-203ENST00000520337 DCAF11Q8TEB1 546 aa11.16□□□□□ -0.62
CTHRC1-203ENST00000520337 FER1L4A9Z1Z3 1794 aa11.16□□□□□ -0.62
CTHRC1-203ENST00000520337 ADGRB3O60242 1522 aa11.15□□□□□ -0.62
CTHRC1-203ENST00000520337 ERVK-7P63135 1459 aa11.15□□□□□ -0.62
CTHRC1-203ENST00000520337 AK7Q96M32 723 aa11.15□□□□□ -0.62
CTHRC1-203ENST00000520337 PPLO60437 1756 aa11.15□□□□□ -0.62
CTHRC1-203ENST00000520337 ZMYM3Q14202 1370 aa11.15□□□□□ -0.63
CTHRC1-203ENST00000520337 CD2BP2O95400 341 aaKnown RBP11.14□□□□□ -0.63
CTHRC1-203ENST00000520337 GIGYF2Q6Y7W6 1299 aaKnown RBP11.14□□□□□ -0.63
CTHRC1-203ENST00000520337 HLA-CQ95604 372 aa11.14□□□□□ -0.63
CTHRC1-203ENST00000520337 SPATA31D1Q6ZQQ2 1576 aa11.14□□□□□ -0.63
CTHRC1-203ENST00000520337 TRPM1Q7Z4N2 1603 aa11.13□□□□□ -0.63
CTHRC1-203ENST00000520337 PRAG1Q86YV5 1406 aa11.13□□□□□ -0.63
CTHRC1-203ENST00000520337 GDF9O60383 454 aa11.13□□□□□ -0.63
CTHRC1-203ENST00000520337 DXOO77932 396 aaKnown RBP11.13□□□□□ -0.63
CTHRC1-203ENST00000520337 IDI1Q13907 227 aa11.13□□□□□ -0.63
CTHRC1-203ENST00000520337 TMEM131LA2VDJ0 1609 aa11.13□□□□□ -0.63
CTHRC1-203ENST00000520337 RALGAPBQ86X10 1494 aa11.12□□□□□ -0.63
CTHRC1-203ENST00000520337 C3P01024 1663 aa11.12□□□□□ -0.63
CTHRC1-203ENST00000520337 TRIM66O15016 1216 aa11.12□□□□□ -0.63
CTHRC1-203ENST00000520337 ZBTB24O43167 697 aaPredicted RBP11.12□□□□□ -0.63
CTHRC1-203ENST00000520337 SLC52A1Q9NWF4 448 aa11.12□□□□□ -0.63
CTHRC1-203ENST00000520337 MADDQ8WXG6 1647 aa11.12□□□□□ -0.63
CTHRC1-203ENST00000520337 SPIRE2Q8WWL2 714 aa11.11□□□□□ -0.63
CTHRC1-203ENST00000520337 ADAMTSL3P82987 1691 aa11.11□□□□□ -0.63
CTHRC1-203ENST00000520337 FDX1P10109 184 aa11.1□□□□□ -0.63
CTHRC1-203ENST00000520337 GUCA2AQ02747 115 aa11.1□□□□□ -0.63
CTHRC1-203ENST00000520337 DIXDC1Q155Q3 683 aa11.1□□□□□ -0.63
CTHRC1-203ENST00000520337 ZNF326Q5BKZ1 582 aaKnown RBP11.1□□□□□ -0.63
CTHRC1-203ENST00000520337 PARP9Q8IXQ6 854 aa11.1□□□□□ -0.63
CTHRC1-203ENST00000520337 ESF1Q9H501 851 aaKnown RBP11.1□□□□□ -0.63
CTHRC1-203ENST00000520337 KIAA1210Q9ULL0 1709 aa11.09□□□□□ -0.63
CTHRC1-203ENST00000520337 MYOM2P54296 1465 aa11.09□□□□□ -0.63
CTHRC1-203ENST00000520337 DGAT1O75907 488 aa11.09□□□□□ -0.63
CTHRC1-203ENST00000520337 PKDCCQ504Y2 493 aa11.09□□□□□ -0.63
CTHRC1-203ENST00000520337 RETREG3Q86VR2 466 aa11.09□□□□□ -0.63
CTHRC1-203ENST00000520337 NRXN1Q9ULB1 1477 aa11.08□□□□□ -0.64
CTHRC1-203ENST00000520337 LAMC1P11047 1609 aa11.08□□□□□ -0.64
CTHRC1-203ENST00000520337 NEXMIFQ5QGS0 1516 aa11.08□□□□□ -0.64
CTHRC1-203ENST00000520337 RPGRIP1LQ68CZ1 1315 aa11.08□□□□□ -0.64
CTHRC1-203ENST00000520337 TNFRSF10AO00220 468 aa11.07□□□□□ -0.64
CTHRC1-203ENST00000520337 HSPA5P11021 654 aaKnown RBP11.07□□□□□ -0.64
CTHRC1-203ENST00000520337 JUNDP17535 347 aa11.07□□□□□ -0.64
CTHRC1-203ENST00000520337 NBPF1Q3BBV0 1214 aa11.07□□□□□ -0.64
CTHRC1-203ENST00000520337 BEGAINQ9BUH8 593 aa11.07□□□□□ -0.64
CTHRC1-203ENST00000520337 HIRIP3Q9BW71 556 aaPredicted RBP11.07□□□□□ -0.64
CTHRC1-203ENST00000520337 PKD2L1Q9P0L9 805 aa11.07□□□□□ -0.64
CTHRC1-203ENST00000520337 KDM5AP29375 1690 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms