RNA–Protein interactions for RNA: ENST00000520276.5

TRPS1-211, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2 BASIC

Gene TRPS1, Length 4,083 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-211ENST00000520276 BTG4Q9NY30 223 aa12.55□□□□□ -0.4
TRPS1-211ENST00000520276 NSD2O96028 1365 aa12.55□□□□□ -0.4
TRPS1-211ENST00000520276 CARD14Q9BXL6 1004 aa12.54□□□□□ -0.4
TRPS1-211ENST00000520276 NEUROD2Q15784 382 aa12.54□□□□□ -0.4
TRPS1-211ENST00000520276 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.54□□□□□ -0.4
TRPS1-211ENST00000520276 USP21Q9UK80 565 aa12.54□□□□□ -0.4
TRPS1-211ENST00000520276 ZNF521Q96K83 1311 aa12.54□□□□□ -0.4
TRPS1-211ENST00000520276 USP6P35125 1406 aa12.54□□□□□ -0.4
TRPS1-211ENST00000520276 RTF1Q92541 710 aaKnown RBP12.53□□□□□ -0.4
TRPS1-211ENST00000520276 IFT172Q9UG01 1749 aa12.53□□□□□ -0.4
TRPS1-211ENST00000520276 CANXP27824 592 aaKnown RBP12.53□□□□□ -0.4
TRPS1-211ENST00000520276 CLUAP1Q96AJ1 413 aa12.53□□□□□ -0.4
TRPS1-211ENST00000520276 QRICH2Q9H0J4 1663 aa12.53□□□□□ -0.4
TRPS1-211ENST00000520276 MFAP1P55081 439 aaKnown RBP12.53□□□□□ -0.4
TRPS1-211ENST00000520276 UTP14CQ5TAP6 766 aaKnown RBP12.53□□□□□ -0.4
TRPS1-211ENST00000520276 EMILIN1Q9Y6C2 1016 aa12.53□□□□□ -0.4
TRPS1-211ENST00000520276 SOS2Q07890 1332 aaPredicted RBP12.53□□□□□ -0.4
TRPS1-211ENST00000520276 SPATA31A6Q5VVP1 1343 aa12.53□□□□□ -0.4
TRPS1-211ENST00000520276 SBNO1A3KN83 1393 aa12.53□□□□□ -0.4
TRPS1-211ENST00000520276 CHD2O14647 1828 aaKnown RBP12.53□□□□□ -0.4
TRPS1-211ENST00000520276 ATP7BP35670 1465 aa12.52□□□□□ -0.4
TRPS1-211ENST00000520276 PPP4R3BQ5MIZ7 849 aa12.52□□□□□ -0.4
TRPS1-211ENST00000520276 TATP17735 454 aaPredicted RBP12.52□□□□□ -0.4
TRPS1-211ENST00000520276 SLFN5Q08AF3 891 aa12.52□□□□□ -0.4
TRPS1-211ENST00000520276 C22orf23Q9BZE7 217 aa12.52□□□□□ -0.4
TRPS1-211ENST00000520276 NRXN3Q9Y4C0 1643 aa12.52□□□□□ -0.41
TRPS1-211ENST00000520276 FBLN1P23142 703 aa12.52□□□□□ -0.41
TRPS1-211ENST00000520276 TNS3Q68CZ2 1445 aa12.51□□□□□ -0.41
TRPS1-211ENST00000520276 C1orf141Q5JVX7 400 aa12.51□□□□□ -0.41
TRPS1-211ENST00000520276 ZNF772Q68DY9 489 aaPredicted RBP12.51□□□□□ -0.41
TRPS1-211ENST00000520276 ANKRD24Q8TF21 1146 aa12.51□□□□□ -0.41
TRPS1-211ENST00000520276 PPP2R1AP30153 589 aa12.51□□□□□ -0.41
TRPS1-211ENST00000520276 DDIT3P35638 169 aa12.51□□□□□ -0.41
TRPS1-211ENST00000520276 VGLL3A8MV65 326 aa12.5□□□□□ -0.41
TRPS1-211ENST00000520276 TSC1Q92574 1164 aa12.5□□□□□ -0.41
TRPS1-211ENST00000520276 CCDC94Q9BW85 323 aaPredicted RBP12.5□□□□□ -0.41
TRPS1-211ENST00000520276 PDZRN3Q9UPQ7 1066 aa12.5□□□□□ -0.41
TRPS1-211ENST00000520276 CDC42BPGQ6DT37 1551 aa12.5□□□□□ -0.41
TRPS1-211ENST00000520276 CCDC146Q8IYE0 955 aa12.5□□□□□ -0.41
TRPS1-211ENST00000520276 DYNC1I1O14576 645 aa12.5□□□□□ -0.41
TRPS1-211ENST00000520276 PCDHB15Q9Y5E8 787 aa12.5□□□□□ -0.41
TRPS1-211ENST00000520276 HMOX1P09601 288 aa12.49□□□□□ -0.41
TRPS1-211ENST00000520276 ILDR1Q86SU0 546 aaPredicted RBP12.49□□□□□ -0.41
TRPS1-211ENST00000520276 FOXD4L1Q9NU39 408 aa12.49□□□□□ -0.41
TRPS1-211ENST00000520276 TMEM51Q9NW97 253 aa12.49□□□□□ -0.41
TRPS1-211ENST00000520276 CBX1P83916 185 aa12.49□□□□□ -0.41
TRPS1-211ENST00000520276 INSRP06213 1382 aa12.49□□□□□ -0.41
TRPS1-211ENST00000520276 IQSEC2Q5JU85 1478 aa12.49□□□□□ -0.41
TRPS1-211ENST00000520276 NWD1Q149M9 1564 aa12.48□□□□□ -0.41
TRPS1-211ENST00000520276 POLR3AO14802 1390 aaPredicted RBP12.48□□□□□ -0.41
TRPS1-211ENST00000520276 SF3B2Q13435 895 aaKnown RBP12.48□□□□□ -0.41
TRPS1-211ENST00000520276 SYTL4Q96C24 671 aaPredicted RBP12.48□□□□□ -0.41
TRPS1-211ENST00000520276 QTRT2Q9H974 415 aaKnown RBP12.48□□□□□ -0.41
TRPS1-211ENST00000520276 TRPC5Q9UL62 973 aaPredicted RBP12.48□□□□□ -0.41
TRPS1-211ENST00000520276 ZNF500O60304 480 aaPredicted RBP12.48□□□□□ -0.41
TRPS1-211ENST00000520276 AMER1Q5JTC6 1135 aaPredicted RBP12.48□□□□□ -0.41
TRPS1-211ENST00000520276 HSCBQ8IWL3 235 aa12.48□□□□□ -0.41
TRPS1-211ENST00000520276 NOL7Q9UMY1 257 aaKnown RBP12.48□□□□□ -0.41
TRPS1-211ENST00000520276 MAP3K19Q56UN5 1328 aa12.48□□□□□ -0.41
TRPS1-211ENST00000520276 KIAA0232Q92628 1395 aa12.48□□□□□ -0.41
TRPS1-211ENST00000520276 DDX54Q8TDD1 881 aaKnown RBP12.48□□□□□ -0.41
TRPS1-211ENST00000520276 IP6K1Q92551 441 aa12.48□□□□□ -0.41
TRPS1-211ENST00000520276 ANP32BQ92688 251 aaKnown RBP12.48□□□□□ -0.41
TRPS1-211ENST00000520276 HSP90AB2PQ58FF8 381 aa12.47□□□□□ -0.41
TRPS1-211ENST00000520276 SULT6B1Q6IMI4 303 aa12.47□□□□□ -0.41
TRPS1-211ENST00000520276 MTERF4Q7Z6M4 381 aaKnown RBP12.47□□□□□ -0.41
TRPS1-211ENST00000520276 TNNQ9UQP3 1299 aa12.47□□□□□ -0.41
TRPS1-211ENST00000520276 XRN1Q8IZH2 1706 aaKnown RBP12.47□□□□□ -0.41
TRPS1-211ENST00000520276 ARHGEF28Q8N1W1 1705 aaKnown RBP12.47□□□□□ -0.41
TRPS1-211ENST00000520276 PLEKHO1Q53GL0 409 aaPredicted RBP12.47□□□□□ -0.41
TRPS1-211ENST00000520276 EXOC5O00471 708 aa12.47□□□□□ -0.41
TRPS1-211ENST00000520276 TRMT2AQ8IZ69 625 aaKnown RBP12.47□□□□□ -0.41
TRPS1-211ENST00000520276 ZBTB22O15209 634 aa12.47□□□□□ -0.41
TRPS1-211ENST00000520276 AFF2P51816 1311 aa12.46□□□□□ -0.41
TRPS1-211ENST00000520276 SPG7Q9UQ90 795 aa12.46□□□□□ -0.41
TRPS1-211ENST00000520276 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.46□□□□□ -0.42
TRPS1-211ENST00000520276 LTBP4Q8N2S1 1624 aa12.46□□□□□ -0.42
TRPS1-211ENST00000520276 PLCD3Q8N3E9 789 aa12.46□□□□□ -0.42
TRPS1-211ENST00000520276 FLT4P35916 1363 aa12.46□□□□□ -0.42
TRPS1-211ENST00000520276 GBP4Q96PP9 640 aa12.45□□□□□ -0.42
TRPS1-211ENST00000520276 POLKQ9UBT6 870 aa12.45□□□□□ -0.42
TRPS1-211ENST00000520276 IGSF3O75054 1194 aa12.45□□□□□ -0.42
TRPS1-211ENST00000520276 RAB3GAP1Q15042 981 aa12.45□□□□□ -0.42
TRPS1-211ENST00000520276 USHBP1Q8N6Y0 703 aa12.45□□□□□ -0.42
TRPS1-211ENST00000520276 HOXC9P31274 260 aa12.45□□□□□ -0.42
TRPS1-211ENST00000520276 RXRBP28702 533 aa12.44□□□□□ -0.42
TRPS1-211ENST00000520276 SKOR2Q2VWA4 1001 aaPredicted RBP12.44□□□□□ -0.42
TRPS1-211ENST00000520276 ARHGEF25Q86VW2 580 aa12.44□□□□□ -0.42
TRPS1-211ENST00000520276 FAM177BA6PVY3 158 aa12.44□□□□□ -0.42
TRPS1-211ENST00000520276 UNC5CLQ8IV45 518 aa12.44□□□□□ -0.42
TRPS1-211ENST00000520276 ZNF830Q96NB3 372 aaPredicted RBP12.44□□□□□ -0.42
TRPS1-211ENST00000520276 KNDC1Q76NI1 1749 aa12.43□□□□□ -0.42
TRPS1-211ENST00000520276 APAF1O14727 1248 aa12.43□□□□□ -0.42
TRPS1-211ENST00000520276 RLBP1P12271 317 aa12.43□□□□□ -0.42
TRPS1-211ENST00000520276 ATP2B3Q16720 1220 aa12.43□□□□□ -0.42
TRPS1-211ENST00000520276 SASS6Q6UVJ0 657 aa12.43□□□□□ -0.42
TRPS1-211ENST00000520276 ZNF710Q8N1W2 664 aa12.43□□□□□ -0.42
TRPS1-211ENST00000520276 PNPLA6Q8IY17 1366 aa12.43□□□□□ -0.42
TRPS1-211ENST00000520276 FAM83GA6ND36 823 aa12.43□□□□□ -0.42
TRPS1-211ENST00000520276 TEFQ10587 303 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms