RNA–Protein interactions for RNA: ENST00000520178.3

CNOT7-208, Transcript of CCR4-NOT transcription complex subunit 7, humanhuman

TSL 5

Gene CNOT7, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT7-208ENST00000520178 KIF3CO14782 793 aa15.68■□□□□ 0.1
CNOT7-208ENST00000520178 DNAJC5GQ8N7S2 189 aa15.68■□□□□ 0.1
CNOT7-208ENST00000520178 COL23A1Q86Y22 540 aaPredicted RBP15.67■□□□□ 0.1
CNOT7-208ENST00000520178 ZNF526Q8TF50 670 aaPredicted RBP15.67■□□□□ 0.1
CNOT7-208ENST00000520178 TOGARAM1Q9Y4F4 1720 aa15.67■□□□□ 0.1
CNOT7-208ENST00000520178 KTN1Q86UP2 1357 aaKnown RBP15.66■□□□□ 0.1
CNOT7-208ENST00000520178 ITGB4P16144 1822 aa15.66■□□□□ 0.1
CNOT7-208ENST00000520178 KCNQ4P56696 695 aa15.65■□□□□ 0.1
CNOT7-208ENST00000520178 BRCA1P38398 1863 aaKnown RBP15.65■□□□□ 0.1
CNOT7-208ENST00000520178 PCNTO95613 3336 aa15.64■□□□□ 0.09
CNOT7-208ENST00000520178 C4BP0C0L5 1744 aa15.64■□□□□ 0.09
CNOT7-208ENST00000520178 HMGB2P26583 209 aaKnown RBP15.64■□□□□ 0.09
CNOT7-208ENST00000520178 ANKRD24Q8TF21 1146 aa15.64■□□□□ 0.09
CNOT7-208ENST00000520178 KIAA1551Q9HCM1 1747 aa15.64■□□□□ 0.09
CNOT7-208ENST00000520178 CCNL1Q9UK58 526 aaPredicted RBP15.64■□□□□ 0.09
CNOT7-208ENST00000520178 PRIM1P49642 420 aaKnown RBP15.63■□□□□ 0.09
CNOT7-208ENST00000520178 MSH5O43196 834 aa15.62■□□□□ 0.09
CNOT7-208ENST00000520178 FLAD1Q8NFF5 587 aa15.62■□□□□ 0.09
CNOT7-208ENST00000520178 DDX54Q8TDD1 881 aaKnown RBP15.62■□□□□ 0.09
CNOT7-208ENST00000520178 TOMM70O94826 608 aa15.61■□□□□ 0.09
CNOT7-208ENST00000520178 MSL1Q68DK7 614 aa15.61■□□□□ 0.09
CNOT7-208ENST00000520178 SYTL4Q96C24 671 aaPredicted RBP15.61■□□□□ 0.09
CNOT7-208ENST00000520178 N4BP2Q86UW6 1770 aaPredicted RBP15.61■□□□□ 0.09
CNOT7-208ENST00000520178 ARFGEF1Q9Y6D6 1849 aa15.61■□□□□ 0.09
CNOT7-208ENST00000520178 USP47Q96K76 1375 aa15.61■□□□□ 0.09
CNOT7-208ENST00000520178 IGSF1Q8N6C5 1336 aa15.6■□□□□ 0.09
CNOT7-208ENST00000520178 PKD1L3Q7Z443 1732 aa15.6■□□□□ 0.09
CNOT7-208ENST00000520178 SBNO2Q9Y2G9 1366 aa15.59■□□□□ 0.09
CNOT7-208ENST00000520178 MAP2P11137 1827 aaKnown RBP15.59■□□□□ 0.09
CNOT7-208ENST00000520178 CD163L1Q9NR16 1453 aa15.59■□□□□ 0.09
CNOT7-208ENST00000520178 JMYQ8N9B5 988 aa15.58■□□□□ 0.08
CNOT7-208ENST00000520178 COL13A1Q5TAT6 717 aaPredicted RBP15.57■□□□□ 0.08
CNOT7-208ENST00000520178 PRELPP51888 382 aa15.56■□□□□ 0.08
CNOT7-208ENST00000520178 IP6K1Q92551 441 aa15.56■□□□□ 0.08
CNOT7-208ENST00000520178 TNRC6CQ9HCJ0 1690 aaKnown RBP15.56■□□□□ 0.08
CNOT7-208ENST00000520178 SBF1O95248 1867 aa15.56■□□□□ 0.08
CNOT7-208ENST00000520178 MEGF6O75095 1541 aa15.55■□□□□ 0.08
CNOT7-208ENST00000520178 NSD3Q9BZ95 1437 aa15.55■□□□□ 0.08
CNOT7-208ENST00000520178 NME9Q86XW9 330 aa15.55■□□□□ 0.08
CNOT7-208ENST00000520178 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.55■□□□□ 0.08
CNOT7-208ENST00000520178 KLRG1Q96E93 195 aa15.55■□□□□ 0.08
CNOT7-208ENST00000520178 EDC4Q6P2E9 1401 aaKnown RBP15.54■□□□□ 0.08
CNOT7-208ENST00000520178 ZCRB1Q8TBF4 217 aaKnown RBP15.54■□□□□ 0.08
CNOT7-208ENST00000520178 RBM46Q8TBY0 533 aaKnown RBP15.53■□□□□ 0.08
CNOT7-208ENST00000520178 CGNL1Q0VF96 1302 aa15.52■□□□□ 0.08
CNOT7-208ENST00000520178 TNS4Q8IZW8 715 aa15.51■□□□□ 0.07
CNOT7-208ENST00000520178 PALLDQ8WX93 1383 aa15.5■□□□□ 0.07
CNOT7-208ENST00000520178 CAPN15O75808 1086 aa15.5■□□□□ 0.07
CNOT7-208ENST00000520178 PXDNLA1KZ92 1463 aa15.5■□□□□ 0.07
CNOT7-208ENST00000520178 C10orf71Q711Q0 1435 aa15.5■□□□□ 0.07
CNOT7-208ENST00000520178 FSTL1Q12841 308 aa15.49■□□□□ 0.07
CNOT7-208ENST00000520178 NMRK2Q9NPI5 230 aa15.48■□□□□ 0.07
CNOT7-208ENST00000520178 PLEKHG2Q9H7P9 1386 aa15.48■□□□□ 0.07
CNOT7-208ENST00000520178 SSFA2P28290 1259 aa15.47■□□□□ 0.07
CNOT7-208ENST00000520178 HDGFL2Q7Z4V5 671 aaPredicted RBP15.47■□□□□ 0.07
CNOT7-208ENST00000520178 LTV1Q96GA3 475 aaPredicted RBP15.47■□□□□ 0.07
CNOT7-208ENST00000520178 AK7Q96M32 723 aa15.47■□□□□ 0.07
CNOT7-208ENST00000520178 WWC3Q9ULE0 1092 aa15.47■□□□□ 0.07
CNOT7-208ENST00000520178 ZNF831Q5JPB2 1677 aa15.47■□□□□ 0.07
CNOT7-208ENST00000520178 C4AP0C0L4 1744 aa15.46■□□□□ 0.07
CNOT7-208ENST00000520178 HOXC9P31274 260 aa15.46■□□□□ 0.07
CNOT7-208ENST00000520178 AMIGO3Q86WK7 504 aa15.46■□□□□ 0.07
CNOT7-208ENST00000520178 RTL1A6NKG5 1358 aa15.46■□□□□ 0.07
CNOT7-208ENST00000520178 ROCK2O75116 1388 aaKnown RBP15.46■□□□□ 0.07
CNOT7-208ENST00000520178 CCDC88AQ3V6T2 1871 aa15.46■□□□□ 0.06
CNOT7-208ENST00000520178 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.45■□□□□ 0.06
CNOT7-208ENST00000520178 SMARCC1Q92922 1105 aaPredicted RBP15.45■□□□□ 0.06
CNOT7-208ENST00000520178 A0A1W2PP64 1363 aa15.45■□□□□ 0.06
CNOT7-208ENST00000520178 MAP3K19Q56UN5 1328 aa15.44■□□□□ 0.06
CNOT7-208ENST00000520178 COL5A3P25940 1745 aaPredicted RBP15.44■□□□□ 0.06
CNOT7-208ENST00000520178 TGFB2P61812 414 aa15.44■□□□□ 0.06
CNOT7-208ENST00000520178 PCDH11XQ9BZA7 1347 aa15.43■□□□□ 0.06
CNOT7-208ENST00000520178 PCDH11YQ9BZA8 1340 aa15.43■□□□□ 0.06
CNOT7-208ENST00000520178 HTRA3P83110 453 aa15.43■□□□□ 0.06
CNOT7-208ENST00000520178 C16orf71Q8IYS4 520 aaPredicted RBP15.43■□□□□ 0.06
CNOT7-208ENST00000520178 TERF2IPQ9NYB0 399 aa15.43■□□□□ 0.06
CNOT7-208ENST00000520178 PHF14O94880 888 aa15.41■□□□□ 0.06
CNOT7-208ENST00000520178 MPRIPQ6WCQ1 1025 aa15.41■□□□□ 0.06
CNOT7-208ENST00000520178 RAPGEF4Q8WZA2 1011 aa15.41■□□□□ 0.06
CNOT7-208ENST00000520178 L3MBTL2Q969R5 705 aa15.41■□□□□ 0.06
CNOT7-208ENST00000520178 BCS1LQ9Y276 419 aa15.41■□□□□ 0.06
CNOT7-208ENST00000520178 KCPQ6ZWJ8 1503 aa15.41■□□□□ 0.06
CNOT7-208ENST00000520178 KDM2BQ8NHM5 1336 aa15.41■□□□□ 0.06
CNOT7-208ENST00000520178 KIF20BQ96Q89 1820 aa15.4■□□□□ 0.06
CNOT7-208ENST00000520178 AMPHP49418 695 aa15.4■□□□□ 0.06
CNOT7-208ENST00000520178 NBPF6Q5VWK0 638 aa15.4■□□□□ 0.06
CNOT7-208ENST00000520178 TMC1Q8TDI8 760 aa15.4■□□□□ 0.06
CNOT7-208ENST00000520178 NBPF4Q96M43 638 aa15.4■□□□□ 0.06
CNOT7-208ENST00000520178 SLC12A5Q9H2X9 1139 aa15.4■□□□□ 0.06
CNOT7-208ENST00000520178 SMG6Q86US8 1419 aaKnown RBP15.4■□□□□ 0.06
CNOT7-208ENST00000520178 MYH14Q7Z406 1995 aaKnown RBP15.4■□□□□ 0.06
CNOT7-208ENST00000520178 SLC34A2O95436 690 aa15.39■□□□□ 0.05
CNOT7-208ENST00000520178 MMP10P09238 476 aa15.39■□□□□ 0.05
CNOT7-208ENST00000520178 ARHGAP27Q6ZUM4 889 aa15.39■□□□□ 0.05
CNOT7-208ENST00000520178 PUS7Q96PZ0 661 aaKnown RBP15.39■□□□□ 0.05
CNOT7-208ENST00000520178 TATP17735 454 aaPredicted RBP15.38■□□□□ 0.05
CNOT7-208ENST00000520178 COG3Q96JB2 828 aa15.38■□□□□ 0.05
CNOT7-208ENST00000520178 CYP27B1O15528 508 aa15.37■□□□□ 0.05
CNOT7-208ENST00000520178 C9orf131Q5VYM1 1079 aa15.37■□□□□ 0.05
CNOT7-208ENST00000520178 SMIM5Q71RC9 77 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms