RNA–Protein interactions for RNA: ENST00000520140.5

VPS37A-206, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS37A, Length 2,102 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-206ENST00000520140 EP400Q96L91 3159 aa18.89■□□□□ 0.62
VPS37A-206ENST00000520140 RXRBP28702 533 aa18.89■□□□□ 0.62
VPS37A-206ENST00000520140 RBM6P78332 1123 aaKnown RBP18.89■□□□□ 0.61
VPS37A-206ENST00000520140 PARP4Q9UKK3 1724 aaKnown RBP18.88■□□□□ 0.61
VPS37A-206ENST00000520140 BARGINQ6ZT62 677 aa18.88■□□□□ 0.61
VPS37A-206ENST00000520140 PLEKHF1Q96S99 279 aa18.88■□□□□ 0.61
VPS37A-206ENST00000520140 DISP2A7MBM2 1401 aa18.87■□□□□ 0.61
VPS37A-206ENST00000520140 MAPK8IP3Q9UPT6 1336 aa18.87■□□□□ 0.61
VPS37A-206ENST00000520140 NEUROD2Q15784 382 aa18.86■□□□□ 0.61
VPS37A-206ENST00000520140 DDX54Q8TDD1 881 aaKnown RBP18.86■□□□□ 0.61
VPS37A-206ENST00000520140 OVOS2A0A0G2JMS6 1433 aa18.86■□□□□ 0.61
VPS37A-206ENST00000520140 NEFMP07197 916 aa18.86■□□□□ 0.61
VPS37A-206ENST00000520140 DDB1Q16531 1140 aa18.86■□□□□ 0.61
VPS37A-206ENST00000520140 SEPT12Q8IYM1 358 aa18.86■□□□□ 0.61
VPS37A-206ENST00000520140 RRP7AQ9Y3A4 280 aaKnown RBP18.86■□□□□ 0.61
VPS37A-206ENST00000520140 MTHFSDQ2M296 383 aaKnown RBP18.85■□□□□ 0.61
VPS37A-206ENST00000520140 EXOC5O00471 708 aa18.85■□□□□ 0.61
VPS37A-206ENST00000520140 ZCRB1Q8TBF4 217 aaKnown RBP18.85■□□□□ 0.61
VPS37A-206ENST00000520140 RUNDC1Q96C34 613 aa18.85■□□□□ 0.61
VPS37A-206ENST00000520140 SALL2Q9Y467 1007 aaPredicted RBP18.85■□□□□ 0.61
VPS37A-206ENST00000520140 LRRC37A3O60309 1634 aa18.84■□□□□ 0.61
VPS37A-206ENST00000520140 FAM182BQ5T319 152 aa18.84■□□□□ 0.61
VPS37A-206ENST00000520140 PNNQ9H307 717 aaKnown RBP18.84■□□□□ 0.61
VPS37A-206ENST00000520140 THSD7AQ9UPZ6 1657 aa18.84■□□□□ 0.61
VPS37A-206ENST00000520140 APAF1O14727 1248 aa18.83■□□□□ 0.61
VPS37A-206ENST00000520140 PLEKHO1Q53GL0 409 aaPredicted RBP18.83■□□□□ 0.61
VPS37A-206ENST00000520140 SHANK3Q9BYB0 1731 aa18.83■□□□□ 0.6
VPS37A-206ENST00000520140 ZNF530Q6P9A1 599 aaPredicted RBP18.83■□□□□ 0.6
VPS37A-206ENST00000520140 CDCA7Q9BWT1 371 aaPredicted RBP18.83■□□□□ 0.6
VPS37A-206ENST00000520140 BRWD3Q6RI45 1802 aa18.83■□□□□ 0.6
VPS37A-206ENST00000520140 ONECUT3O60422 494 aaPredicted RBP18.82■□□□□ 0.6
VPS37A-206ENST00000520140 SPG7Q9UQ90 795 aa18.82■□□□□ 0.6
VPS37A-206ENST00000520140 PKD1L3Q7Z443 1732 aa18.82■□□□□ 0.6
VPS37A-206ENST00000520140 KAT6BQ8WYB5 2073 aa18.82■□□□□ 0.6
VPS37A-206ENST00000520140 CYP27B1O15528 508 aa18.81■□□□□ 0.6
VPS37A-206ENST00000520140 AMOTQ4VCS5 1084 aa18.81■□□□□ 0.6
VPS37A-206ENST00000520140 DLG5Q8TDM6 1919 aa18.81■□□□□ 0.6
VPS37A-206ENST00000520140 RGS12O14924 1447 aa18.81■□□□□ 0.6
VPS37A-206ENST00000520140 PDE3BQ13370 1112 aa18.8■□□□□ 0.6
VPS37A-206ENST00000520140 TNS2Q63HR2 1409 aa18.8■□□□□ 0.6
VPS37A-206ENST00000520140 PCDH11XQ9BZA7 1347 aa18.79■□□□□ 0.6
VPS37A-206ENST00000520140 PCDH11YQ9BZA8 1340 aa18.79■□□□□ 0.6
VPS37A-206ENST00000520140 C1orf141Q5JVX7 400 aa18.79■□□□□ 0.6
VPS37A-206ENST00000520140 MARCH10Q8NA82 808 aaPredicted RBP18.79■□□□□ 0.6
VPS37A-206ENST00000520140 TMPOP42166 694 aaKnown RBP18.78■□□□□ 0.6
VPS37A-206ENST00000520140 RIPK4P57078 832 aa18.78■□□□□ 0.6
VPS37A-206ENST00000520140 GAS2L2Q8NHY3 880 aa18.78■□□□□ 0.6
VPS37A-206ENST00000520140 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.78■□□□□ 0.69e-7■■□□□ 13.2
VPS37A-206ENST00000520140 PHKG2P15735 406 aa18.77■□□□□ 0.6
VPS37A-206ENST00000520140 NFE2L2Q16236 605 aa18.77■□□□□ 0.6
VPS37A-206ENST00000520140 MPRIPQ6WCQ1 1025 aa18.77■□□□□ 0.6
VPS37A-206ENST00000520140 YTHDC1Q96MU7 727 aaKnown RBP18.77■□□□□ 0.6
VPS37A-206ENST00000520140 DCTN1Q14203 1278 aa18.77■□□□□ 0.6
VPS37A-206ENST00000520140 IFNL2Q8IZJ0 200 aa18.77■□□□□ 0.6
VPS37A-206ENST00000520140 KRT27Q7Z3Y8 459 aa18.76■□□□□ 0.59
VPS37A-206ENST00000520140 VIRMAQ69YN4 1812 aaKnown RBP18.75■□□□□ 0.59
VPS37A-206ENST00000520140 MCM10Q7L590 875 aa18.75■□□□□ 0.59
VPS37A-206ENST00000520140 GNAT3A8MTJ3 354 aa18.74■□□□□ 0.59
VPS37A-206ENST00000520140 HNRNPUQ00839 825 aaKnown RBP eCLIP18.74■□□□□ 0.59
VPS37A-206ENST00000520140 AKAP4Q5JQC9 854 aa18.74■□□□□ 0.59
VPS37A-206ENST00000520140 THUMPD2Q9BTF0 503 aaKnown RBP18.74■□□□□ 0.59
VPS37A-206ENST00000520140 MAP3K5Q99683 1374 aa18.74■□□□□ 0.59
VPS37A-206ENST00000520140 LGR6Q9HBX8 967 aa18.74■□□□□ 0.59
VPS37A-206ENST00000520140 RTF1Q92541 710 aaKnown RBP18.73■□□□□ 0.59
VPS37A-206ENST00000520140 ACSBG1Q96GR2 724 aa18.73■□□□□ 0.59
VPS37A-206ENST00000520140 SYTL4Q96C24 671 aaPredicted RBP18.71■□□□□ 0.59
VPS37A-206ENST00000520140 TRIM35Q9UPQ4 493 aa18.71■□□□□ 0.59
VPS37A-206ENST00000520140 PLEKHG2Q9H7P9 1386 aa18.71■□□□□ 0.59
VPS37A-206ENST00000520140 IL17REQ8NFR9 667 aa18.71■□□□□ 0.59
VPS37A-206ENST00000520140 KDM6AO15550 1401 aaPredicted RBP18.7■□□□□ 0.58
VPS37A-206ENST00000520140 DOT1LQ8TEK3 1739 aa18.7■□□□□ 0.58
VPS37A-206ENST00000520140 TOGARAM1Q9Y4F4 1720 aa18.69■□□□□ 0.58
VPS37A-206ENST00000520140 SCN11AQ9UI33 1791 aa18.69■□□□□ 0.58
VPS37A-206ENST00000520140 DCAF5Q96JK2 942 aa18.69■□□□□ 0.58
VPS37A-206ENST00000520140 RNMTO43148 476 aaKnown RBP18.68■□□□□ 0.58
VPS37A-206ENST00000520140 HSP90AB1P08238 724 aaKnown RBP18.68■□□□□ 0.58
VPS37A-206ENST00000520140 NKX1-1Q15270 411 aaPredicted RBP18.68■□□□□ 0.58
VPS37A-206ENST00000520140 KCNQ2O43526 872 aa18.67■□□□□ 0.58
VPS37A-206ENST00000520140 PRIM1P49642 420 aaKnown RBP18.67■□□□□ 0.58
VPS37A-206ENST00000520140 PTF1AQ7RTS3 328 aa18.67■□□□□ 0.58
VPS37A-206ENST00000520140 WWC1Q8IX03 1113 aa18.67■□□□□ 0.58
VPS37A-206ENST00000520140 ITGB4P16144 1822 aa18.66■□□□□ 0.58
VPS37A-206ENST00000520140 NFATC2IPQ8NCF5 419 aa18.66■□□□□ 0.58
VPS37A-206ENST00000520140 LMOD3Q0VAK6 560 aa18.65■□□□□ 0.58
VPS37A-206ENST00000520140 LAS1LQ9Y4W2 734 aaKnown RBP18.65■□□□□ 0.58
VPS37A-206ENST00000520140 SBF2Q86WG5 1849 aa18.65■□□□□ 0.58
VPS37A-206ENST00000520140 CABP4P57796 275 aa18.65■□□□□ 0.58
VPS37A-206ENST00000520140 TEFQ10587 303 aa18.65■□□□□ 0.58
VPS37A-206ENST00000520140 FAM196AQ6ZSG2 479 aa18.64■□□□□ 0.57
VPS37A-206ENST00000520140 MIS18AQ9NYP9 233 aa18.64■□□□□ 0.57
VPS37A-206ENST00000520140 HTATSF1O43719 755 aaKnown RBP18.64■□□□□ 0.57
VPS37A-206ENST00000520140 CEMIPQ8WUJ3 1361 aa18.63■□□□□ 0.57
VPS37A-206ENST00000520140 TRIM37O94972 964 aa18.63■□□□□ 0.57
VPS37A-206ENST00000520140 ADAMTS7Q9UKP4 1686 aa18.63■□□□□ 0.57
VPS37A-206ENST00000520140 SLC52A2Q9HAB3 445 aa18.62■□□□□ 0.57
VPS37A-206ENST00000520140 TMOD3Q9NYL9 352 aa18.62■□□□□ 0.57
VPS37A-206ENST00000520140 CCDC27Q2M243 656 aa18.62■□□□□ 0.57
VPS37A-206ENST00000520140 ERVV-2B6SEH9 535 aa18.61■□□□□ 0.57
VPS37A-206ENST00000520140 ILDR2Q71H61 639 aa18.61■□□□□ 0.57
VPS37A-206ENST00000520140 PIGBQ92521 554 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms