RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 ZNF335Q9H4Z2 1342 aaPredicted RBP34.49■■■■□ 3.11
COL13A1-212ENST00000520133 CRB1P82279 1406 aa34.49■■■■□ 3.11
COL13A1-212ENST00000520133 TRIM27P14373 513 aa34.48■■■■□ 3.11
COL13A1-212ENST00000520133 TSPYL6Q8N831 410 aa34.48■■■■□ 3.11
COL13A1-212ENST00000520133 PLEKHG5O94827 1062 aa34.47■■■■□ 3.11
COL13A1-212ENST00000520133 RGPD2P0DJD1 1756 aa34.47■■■■□ 3.11
COL13A1-212ENST00000520133 GNAT3A8MTJ3 354 aa34.46■■■■□ 3.11
COL13A1-212ENST00000520133 NBPF6Q5VWK0 638 aa34.46■■■■□ 3.11
COL13A1-212ENST00000520133 NBPF4Q96M43 638 aa34.46■■■■□ 3.11
COL13A1-212ENST00000520133 TCERG1O14776 1098 aaKnown RBP34.46■■■■□ 3.11
COL13A1-212ENST00000520133 C8orf58Q8NAV2 365 aa34.46■■■■□ 3.11
COL13A1-212ENST00000520133 MED1Q15648 1581 aaPredicted RBP34.45■■■■□ 3.11
COL13A1-212ENST00000520133 USHBP1Q8N6Y0 703 aa34.45■■■■□ 3.11
COL13A1-212ENST00000520133 DDX17Q92841 729 aaKnown RBP34.45■■■■□ 3.11
COL13A1-212ENST00000520133 TNS3Q68CZ2 1445 aa34.45■■■■□ 3.11
COL13A1-212ENST00000520133 ELL2O00472 640 aaPredicted RBP34.44■■■■□ 3.1
COL13A1-212ENST00000520133 KIAA0232Q92628 1395 aa34.44■■■■□ 3.1
COL13A1-212ENST00000520133 PXDNQ92626 1479 aa34.43■■■■□ 3.1
COL13A1-212ENST00000520133 MAP3K5Q99683 1374 aa34.43■■■■□ 3.1
COL13A1-212ENST00000520133 MRPL50Q8N5N7 158 aaKnown RBP34.42■■■■□ 3.1
COL13A1-212ENST00000520133 LRRC37A3O60309 1634 aa34.41■■■■□ 3.1
COL13A1-212ENST00000520133 ARHGAP45Q92619 1136 aa34.41■■■■□ 3.1
COL13A1-212ENST00000520133 DDX19BQ9UMR2 479 aa34.41■■■■□ 3.1
COL13A1-212ENST00000520133 ANKRD24Q8TF21 1146 aa34.4■■■■□ 3.1
COL13A1-212ENST00000520133 BRINP3Q76B58 766 aa34.39■■■■□ 3.1
COL13A1-212ENST00000520133 SPATA31A3Q5VYP0 1347 aa34.39■■■■□ 3.1
COL13A1-212ENST00000520133 RGPD5Q99666 1765 aa34.38■■■■□ 3.09
COL13A1-212ENST00000520133 NCAPD2Q15021 1401 aa34.37■■■■□ 3.09
COL13A1-212ENST00000520133 LRRC59Q96AG4 307 aaKnown RBP34.37■■■■□ 3.09
COL13A1-212ENST00000520133 ZC3H6P61129 1189 aaKnown RBP34.37■■■■□ 3.09
COL13A1-212ENST00000520133 ITPRIPQ8IWB1 547 aa34.37■■■■□ 3.09
COL13A1-212ENST00000520133 TSPYL4Q9UJ04 414 aa34.37■■■■□ 3.09
COL13A1-212ENST00000520133 CAMTA1Q9Y6Y1 1673 aa34.36■■■■□ 3.09
COL13A1-212ENST00000520133 SLAIN2Q9P270 581 aa34.36■■■■□ 3.09
COL13A1-212ENST00000520133 AXIN2Q9Y2T1 843 aa34.34■■■■□ 3.09
COL13A1-212ENST00000520133 TMEM57Q8N5G2 664 aa34.32■■■■□ 3.09
COL13A1-212ENST00000520133 IGHDP01880 384 aa34.32■■■■□ 3.08
COL13A1-212ENST00000520133 AMOTQ4VCS5 1084 aa34.32■■■■□ 3.08
COL13A1-212ENST00000520133 PLEKHO1Q53GL0 409 aaPredicted RBP34.32■■■■□ 3.08
COL13A1-212ENST00000520133 BABAM1Q9NWV8 329 aa34.32■■■■□ 3.08
COL13A1-212ENST00000520133 CRYBG1Q9Y4K1 1723 aa34.31■■■■□ 3.08
COL13A1-212ENST00000520133 IL17REQ8NFR9 667 aa34.3■■■■□ 3.08
COL13A1-212ENST00000520133 ERBB3P21860 1342 aa34.3■■■■□ 3.08
COL13A1-212ENST00000520133 ABCC6O95255 1503 aa34.3■■■■□ 3.08
COL13A1-212ENST00000520133 MIS18AQ9NYP9 233 aa34.3■■■■□ 3.08
COL13A1-212ENST00000520133 PCDHB15Q9Y5E8 787 aa34.3■■■■□ 3.08
COL13A1-212ENST00000520133 API5Q9BZZ5 524 aaKnown RBP34.29■■■■□ 3.08
COL13A1-212ENST00000520133 CHMP4BQ9H444 224 aaKnown RBP34.28■■■■□ 3.08
COL13A1-212ENST00000520133 COL18A1P39060 1754 aa34.28■■■■□ 3.08
COL13A1-212ENST00000520133 KRT24Q2M2I5 525 aa34.27■■■■□ 3.08
COL13A1-212ENST00000520133 LMO7Q8WWI1 1683 aa34.27■■■■□ 3.08
COL13A1-212ENST00000520133 TAF7Q15545 349 aaPredicted RBP34.27■■■■□ 3.08
COL13A1-212ENST00000520133 RWDD1Q9H446 243 aaPredicted RBP34.27■■■■□ 3.08
COL13A1-212ENST00000520133 AKAP4Q5JQC9 854 aa34.25■■■■□ 3.07
COL13A1-212ENST00000520133 CABLES1Q8TDN4 633 aa34.25■■■■□ 3.07
COL13A1-212ENST00000520133 SOS2Q07890 1332 aaPredicted RBP34.25■■■■□ 3.07
COL13A1-212ENST00000520133 CEMIPQ8WUJ3 1361 aa34.24■■■■□ 3.07
COL13A1-212ENST00000520133 ZNF530Q6P9A1 599 aaPredicted RBP34.23■■■■□ 3.07
COL13A1-212ENST00000520133 FAM208AQ9UK61 1670 aaKnown RBP34.23■■■■□ 3.07
COL13A1-212ENST00000520133 ABCC4O15439 1325 aa34.23■■■■□ 3.07
COL13A1-212ENST00000520133 CPDO75976 1380 aa34.22■■■■□ 3.07
COL13A1-212ENST00000520133 ZBTB40Q9NUA8 1239 aa34.21■■■■□ 3.07
COL13A1-212ENST00000520133 SOS1Q07889 1333 aaPredicted RBP34.21■■■■□ 3.07
COL13A1-212ENST00000520133 C1orf141Q5JVX7 400 aa34.2■■■■□ 3.07
COL13A1-212ENST00000520133 SKAP1Q86WV1 359 aa34.19■■■■□ 3.06
COL13A1-212ENST00000520133 VIRMAQ69YN4 1812 aaKnown RBP34.18■■■■□ 3.06
COL13A1-212ENST00000520133 CACNA1FO60840 1977 aa34.17■■■■□ 3.06
COL13A1-212ENST00000520133 PTPRCP08575 1304 aa34.17■■■■□ 3.06
COL13A1-212ENST00000520133 NLRP2Q9NX02 1062 aa34.17■■■■□ 3.06
COL13A1-212ENST00000520133 CSB-PGBD3P0DP91 1061 aa34.15■■■■□ 3.06
COL13A1-212ENST00000520133 RAPGEF4Q8WZA2 1011 aa34.15■■■■□ 3.06
COL13A1-212ENST00000520133 NHSL1Q5SYE7 1610 aa34.14■■■■□ 3.06
COL13A1-212ENST00000520133 OVOS2A0A0G2JMS6 1433 aa34.14■■■■□ 3.06
COL13A1-212ENST00000520133 HDAC1Q13547 482 aaPredicted RBP34.14■■■■□ 3.06
COL13A1-212ENST00000520133 PDE4AP27815 886 aa34.14■■■■□ 3.06
COL13A1-212ENST00000520133 CHRNA2Q15822 529 aa34.14■■■■□ 3.06
COL13A1-212ENST00000520133 SLC4A2P04920 1241 aa34.13■■■■□ 3.05
COL13A1-212ENST00000520133 TEFQ10587 303 aa34.13■■■■□ 3.05
COL13A1-212ENST00000520133 LGR6Q9HBX8 967 aa34.13■■■■□ 3.05
COL13A1-212ENST00000520133 ZBTB7BO15156 539 aaPredicted RBP34.12■■■■□ 3.05
COL13A1-212ENST00000520133 PLEKHG2Q9H7P9 1386 aa34.11■■■■□ 3.05
COL13A1-212ENST00000520133 RGS3P49796 1198 aa34.11■■■■□ 3.05
COL13A1-212ENST00000520133 STK31Q9BXU1 1019 aa34.11■■■■□ 3.05
COL13A1-212ENST00000520133 CCDC30Q5VVM6 783 aa34.11■■■■□ 3.05
COL13A1-212ENST00000520133 KDM3BQ7LBC6 1761 aa34.1■■■■□ 3.05
COL13A1-212ENST00000520133 BACH2Q9BYV9 841 aa34.1■■■■□ 3.05
COL13A1-212ENST00000520133 TATP17735 454 aaPredicted RBP34.09■■■■□ 3.05
COL13A1-212ENST00000520133 MPRIPQ6WCQ1 1025 aa34.09■■■■□ 3.05
COL13A1-212ENST00000520133 RNMTO43148 476 aaKnown RBP34.09■■■■□ 3.05
COL13A1-212ENST00000520133 INTS3Q68E01 1043 aaKnown RBP34.07■■■■□ 3.04
COL13A1-212ENST00000520133 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.07■■■■□ 3.04
COL13A1-212ENST00000520133 RGS12O14924 1447 aa34.06■■■■□ 3.04
COL13A1-212ENST00000520133 CHMP4AQ9BY43 222 aa34.06■■■■□ 3.04
COL13A1-212ENST00000520133 PRDM11Q9NQV5 511 aa34.06■■■■□ 3.04
COL13A1-212ENST00000520133 ABCA3Q99758 1704 aa34.06■■■■□ 3.04
COL13A1-212ENST00000520133 SPG7Q9UQ90 795 aa34.05■■■■□ 3.04
COL13A1-212ENST00000520133 ADAMTS7Q9UKP4 1686 aa34.03■■■■□ 3.04
COL13A1-212ENST00000520133 BTBD11A6QL63 1104 aa34.03■■■■□ 3.04
COL13A1-212ENST00000520133 PDZRN3Q9UPQ7 1066 aa34.03■■■■□ 3.04
COL13A1-212ENST00000520133 HOXB7P09629 217 aa34.02■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms