RNA–Protein interactions for RNA: ENST00000520102.1

CHMP7-208, Transcript of charged multivesicular body protein 7, humanhuman

TSL 4

Gene CHMP7, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-208ENST00000520102 TUBGCP6Q96RT7 1819 aa11.03□□□□□ -0.64
CHMP7-208ENST00000520102 FYB1O15117 783 aa11.03□□□□□ -0.64
CHMP7-208ENST00000520102 PRIM1P49642 420 aaKnown RBP11.03□□□□□ -0.64
CHMP7-208ENST00000520102 KCNQ4P56696 695 aa11.03□□□□□ -0.64
CHMP7-208ENST00000520102 TMF1P82094 1093 aa11.03□□□□□ -0.64
CHMP7-208ENST00000520102 SLC27A3Q5K4L6 730 aa11.03□□□□□ -0.64
CHMP7-208ENST00000520102 ARXQ96QS3 562 aa11.03□□□□□ -0.64
CHMP7-208ENST00000520102 GGNBP2Q9H3C7 697 aa11.03□□□□□ -0.64
CHMP7-208ENST00000520102 NBPF6Q5VWK0 638 aa11.02□□□□□ -0.65
CHMP7-208ENST00000520102 USHBP1Q8N6Y0 703 aa11.02□□□□□ -0.65
CHMP7-208ENST00000520102 ZCRB1Q8TBF4 217 aaKnown RBP11.02□□□□□ -0.65
CHMP7-208ENST00000520102 NBPF4Q96M43 638 aa11.02□□□□□ -0.65
CHMP7-208ENST00000520102 PNPLA7Q6ZV29 1317 aa11.02□□□□□ -0.65
CHMP7-208ENST00000520102 KIF20BQ96Q89 1820 aa11.02□□□□□ -0.65
CHMP7-208ENST00000520102 MAP3K5Q99683 1374 aa11.01□□□□□ -0.65
CHMP7-208ENST00000520102 COL24A1Q17RW2 1714 aa11.01□□□□□ -0.65
CHMP7-208ENST00000520102 SMG6Q86US8 1419 aaKnown RBP11.01□□□□□ -0.65
CHMP7-208ENST00000520102 SLC16A10Q8TF71 515 aa11□□□□□ -0.65
CHMP7-208ENST00000520102 TFCP2L1Q9NZI6 479 aa11□□□□□ -0.65
CHMP7-208ENST00000520102 HSP90AB2PQ58FF8 381 aa10.99□□□□□ -0.65
CHMP7-208ENST00000520102 ZNF784Q8NCA9 323 aaPredicted RBP10.99□□□□□ -0.65
CHMP7-208ENST00000520102 CGNL1Q0VF96 1302 aa10.99□□□□□ -0.65
CHMP7-208ENST00000520102 INSRP06213 1382 aa10.99□□□□□ -0.65
CHMP7-208ENST00000520102 TRIM26Q12899 539 aaPredicted RBP10.98□□□□□ -0.65
CHMP7-208ENST00000520102 KLHL34Q8N239 644 aa10.98□□□□□ -0.65
CHMP7-208ENST00000520102 RAPGEF4Q8WZA2 1011 aa10.98□□□□□ -0.65
CHMP7-208ENST00000520102 CCNL1Q9UK58 526 aaPredicted RBP10.98□□□□□ -0.65
CHMP7-208ENST00000520102 FLT4P35916 1363 aa10.98□□□□□ -0.65
CHMP7-208ENST00000520102 CHD4Q14839 1912 aa10.97□□□□□ -0.65
CHMP7-208ENST00000520102 TATP17735 454 aaPredicted RBP10.97□□□□□ -0.65
CHMP7-208ENST00000520102 POLD1P28340 1107 aa10.97□□□□□ -0.65
CHMP7-208ENST00000520102 CDCA8Q53HL2 280 aa10.97□□□□□ -0.65
CHMP7-208ENST00000520102 CARD14Q9BXL6 1004 aa10.97□□□□□ -0.65
CHMP7-208ENST00000520102 KIF24Q5T7B8 1368 aa10.97□□□□□ -0.65
CHMP7-208ENST00000520102 TOGARAM1Q9Y4F4 1720 aa10.96□□□□□ -0.65
CHMP7-208ENST00000520102 C5P01031 1676 aa10.96□□□□□ -0.65
CHMP7-208ENST00000520102 NSD3Q9BZ95 1437 aa10.96□□□□□ -0.65
CHMP7-208ENST00000520102 PCDH11XQ9BZA7 1347 aa10.96□□□□□ -0.65
CHMP7-208ENST00000520102 PCDH11YQ9BZA8 1340 aa10.96□□□□□ -0.65
CHMP7-208ENST00000520102 EMILIN1Q9Y6C2 1016 aa10.96□□□□□ -0.65
CHMP7-208ENST00000520102 CYP27B1O15528 508 aa10.95□□□□□ -0.66
CHMP7-208ENST00000520102 GPR162Q16538 588 aa10.95□□□□□ -0.66
CHMP7-208ENST00000520102 COL23A1Q86Y22 540 aaPredicted RBP10.95□□□□□ -0.66
CHMP7-208ENST00000520102 NLGN2Q8NFZ4 835 aa10.95□□□□□ -0.66
CHMP7-208ENST00000520102 PKD1L3Q7Z443 1732 aa10.95□□□□□ -0.66
CHMP7-208ENST00000520102 ANKRD26Q9UPS8 1709 aa10.95□□□□□ -0.66
CHMP7-208ENST00000520102 GOLGB1Q14789 3259 aaKnown RBP10.94□□□□□ -0.66
CHMP7-208ENST00000520102 PALLDQ8WX93 1383 aa10.94□□□□□ -0.66
CHMP7-208ENST00000520102 MSH5O43196 834 aa10.94□□□□□ -0.66
CHMP7-208ENST00000520102 NCAPD2Q15021 1401 aa10.93□□□□□ -0.66
CHMP7-208ENST00000520102 ITGB4P16144 1822 aa10.93□□□□□ -0.66
CHMP7-208ENST00000520102 TAF1LQ8IZX4 1826 aa10.93□□□□□ -0.66
CHMP7-208ENST00000520102 PPM1GO15355 546 aaPredicted RBP10.93□□□□□ -0.66
CHMP7-208ENST00000520102 MSL1Q68DK7 614 aa10.93□□□□□ -0.66
CHMP7-208ENST00000520102 MPRIPQ6WCQ1 1025 aa10.93□□□□□ -0.66
CHMP7-208ENST00000520102 PELP1Q8IZL8 1130 aaKnown RBP10.93□□□□□ -0.66
CHMP7-208ENST00000520102 C4BP0C0L5 1744 aa10.92□□□□□ -0.66
CHMP7-208ENST00000520102 MAP2P11137 1827 aaKnown RBP10.91□□□□□ -0.66
CHMP7-208ENST00000520102 WASHC2AQ641Q2 1341 aa10.9□□□□□ -0.66
CHMP7-208ENST00000520102 YBX3P16989 372 aaKnown RBP eCLIP10.9□□□□□ -0.66
CHMP7-208ENST00000520102 AMIGO3Q86WK7 504 aa10.9□□□□□ -0.66
CHMP7-208ENST00000520102 PIGBQ92521 554 aa10.9□□□□□ -0.66
CHMP7-208ENST00000520102 TIMELESSQ9UNS1 1208 aa10.9□□□□□ -0.66
CHMP7-208ENST00000520102 NKX1-1Q15270 411 aaPredicted RBP10.89□□□□□ -0.67
CHMP7-208ENST00000520102 SMIM5Q71RC9 77 aa10.89□□□□□ -0.67
CHMP7-208ENST00000520102 SMARCC1Q92922 1105 aaPredicted RBP10.89□□□□□ -0.67
CHMP7-208ENST00000520102 EYA1Q99502 592 aa10.89□□□□□ -0.67
CHMP7-208ENST00000520102 POLKQ9UBT6 870 aa10.89□□□□□ -0.67
CHMP7-208ENST00000520102 SPG7Q9UQ90 795 aa10.89□□□□□ -0.67
CHMP7-208ENST00000520102 UBR3Q6ZT12 1888 aa10.89□□□□□ -0.67
CHMP7-208ENST00000520102 C1QTNF8P60827 252 aa10.88□□□□□ -0.67
CHMP7-208ENST00000520102 FLAD1Q8NFF5 587 aa10.88□□□□□ -0.67
CHMP7-208ENST00000520102 AK7Q96M32 723 aa10.88□□□□□ -0.67
CHMP7-208ENST00000520102 POLR3GLQ9BT43 218 aa10.88□□□□□ -0.67
CHMP7-208ENST00000520102 PHF14O94880 888 aa10.87□□□□□ -0.67
CHMP7-208ENST00000520102 HMGB2P26583 209 aaKnown RBP10.87□□□□□ -0.67
CHMP7-208ENST00000520102 TNNT2P45379 298 aaPredicted RBP10.87□□□□□ -0.67
CHMP7-208ENST00000520102 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.87□□□□□ -0.67
CHMP7-208ENST00000520102 LOC102724428A0A0B4J2F2 783 aa10.86□□□□□ -0.67
CHMP7-208ENST00000520102 GRIN3BO60391 1043 aa10.86□□□□□ -0.67
CHMP7-208ENST00000520102 PHKG2P15735 406 aa10.86□□□□□ -0.67
CHMP7-208ENST00000520102 SIK1P57059 783 aa10.86□□□□□ -0.67
CHMP7-208ENST00000520102 EIF4A2Q14240 407 aaKnown RBP10.86□□□□□ -0.67
CHMP7-208ENST00000520102 IFNL2Q8IZJ0 200 aa10.86□□□□□ -0.67
CHMP7-208ENST00000520102 LINC00116Q8NCU8 138 aa10.86□□□□□ -0.67
CHMP7-208ENST00000520102 PCGF6Q9BYE7 350 aa10.86□□□□□ -0.67
CHMP7-208ENST00000520102 TMOD3Q9NYL9 352 aa10.86□□□□□ -0.67
CHMP7-208ENST00000520102 ASAP1Q9ULH1 1129 aa10.86□□□□□ -0.67
CHMP7-208ENST00000520102 CD2APQ9Y5K6 639 aa10.86□□□□□ -0.67
CHMP7-208ENST00000520102 CLSPNQ9HAW4 1339 aa10.85□□□□□ -0.67
CHMP7-208ENST00000520102 SENP3-EIF4A1A0A087X0R7 540 aa10.85□□□□□ -0.67
CHMP7-208ENST00000520102 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.85□□□□□ -0.67
CHMP7-208ENST00000520102 SSFA2P28290 1259 aa10.85□□□□□ -0.67
CHMP7-208ENST00000520102 ITPK1Q13572 414 aa10.85□□□□□ -0.67
CHMP7-208ENST00000520102 GIGYF1O75420 1035 aaPredicted RBP10.84□□□□□ -0.67
CHMP7-208ENST00000520102 ATP6V1AP38606 617 aa10.84□□□□□ -0.67
CHMP7-208ENST00000520102 IGSF1Q8N6C5 1336 aa10.84□□□□□ -0.67
CHMP7-208ENST00000520102 ATG3Q9NT62 314 aa10.83□□□□□ -0.68
CHMP7-208ENST00000520102 KDRP35968 1356 aa10.82□□□□□ -0.68
CHMP7-208ENST00000520102 PLEKHG2Q9H7P9 1386 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms