RNA–Protein interactions for RNA: ENST00000519823.2

MTCL1-208, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 4

Gene MTCL1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-208ENST00000519823 SLC16A10Q8TF71 515 aa17.71■□□□□ 0.43
MTCL1-208ENST00000519823 SHANK3Q9BYB0 1731 aa17.71■□□□□ 0.43
MTCL1-208ENST00000519823 RTL1A6NKG5 1358 aa17.7■□□□□ 0.42
MTCL1-208ENST00000519823 NSD2O96028 1365 aa17.7■□□□□ 0.42
MTCL1-208ENST00000519823 PRIM1P49642 420 aaKnown RBP17.7■□□□□ 0.42
MTCL1-208ENST00000519823 ZCRB1Q8TBF4 217 aaKnown RBP17.7■□□□□ 0.42
MTCL1-208ENST00000519823 MEGF6O75095 1541 aa17.69■□□□□ 0.42
MTCL1-208ENST00000519823 CHD4Q14839 1912 aa17.69■□□□□ 0.42
MTCL1-208ENST00000519823 LY75O60449 1722 aa17.69■□□□□ 0.42
MTCL1-208ENST00000519823 PNPLA7Q6ZV29 1317 aa17.69■□□□□ 0.42
MTCL1-208ENST00000519823 NBPF6Q5VWK0 638 aa17.68■□□□□ 0.42
MTCL1-208ENST00000519823 DOT1LQ8TEK3 1739 aa17.68■□□□□ 0.42
MTCL1-208ENST00000519823 NBPF4Q96M43 638 aa17.68■□□□□ 0.42
MTCL1-208ENST00000519823 TUBGCP6Q96RT7 1819 aa17.67■□□□□ 0.42
MTCL1-208ENST00000519823 TMF1P82094 1093 aa17.66■□□□□ 0.42
MTCL1-208ENST00000519823 RRS1Q15050 365 aaKnown RBP17.66■□□□□ 0.42
MTCL1-208ENST00000519823 ZNF784Q8NCA9 323 aaPredicted RBP17.66■□□□□ 0.42
MTCL1-208ENST00000519823 GGNBP2Q9H3C7 697 aa17.66■□□□□ 0.42
MTCL1-208ENST00000519823 CGNL1Q0VF96 1302 aa17.66■□□□□ 0.42
MTCL1-208ENST00000519823 KCNQ4P56696 695 aa17.65■□□□□ 0.42
MTCL1-208ENST00000519823 SYTL4Q96C24 671 aaPredicted RBP17.65■□□□□ 0.42
MTCL1-208ENST00000519823 UTRNP46939 3433 aa17.64■□□□□ 0.41
MTCL1-208ENST00000519823 INSRP06213 1382 aa17.64■□□□□ 0.41
MTCL1-208ENST00000519823 USP47Q96K76 1375 aa17.64■□□□□ 0.41
MTCL1-208ENST00000519823 TFCP2L1Q9NZI6 479 aa17.63■□□□□ 0.41
MTCL1-208ENST00000519823 KIF24Q5T7B8 1368 aa17.63■□□□□ 0.41
MTCL1-208ENST00000519823 HSP90AB2PQ58FF8 381 aa17.62■□□□□ 0.41
MTCL1-208ENST00000519823 USHBP1Q8N6Y0 703 aa17.62■□□□□ 0.41
MTCL1-208ENST00000519823 POLD1P28340 1107 aa17.61■□□□□ 0.41
MTCL1-208ENST00000519823 RAPGEF4Q8WZA2 1011 aa17.61■□□□□ 0.41
MTCL1-208ENST00000519823 CCNL1Q9UK58 526 aaPredicted RBP17.61■□□□□ 0.41
MTCL1-208ENST00000519823 CDCA8Q53HL2 280 aa17.6■□□□□ 0.41
MTCL1-208ENST00000519823 CARD14Q9BXL6 1004 aa17.6■□□□□ 0.41
MTCL1-208ENST00000519823 FLT4P35916 1363 aa17.6■□□□□ 0.41
MTCL1-208ENST00000519823 KIF20BQ96Q89 1820 aa17.59■□□□□ 0.41
MTCL1-208ENST00000519823 SMG6Q86US8 1419 aaKnown RBP17.59■□□□□ 0.41
MTCL1-208ENST00000519823 TATP17735 454 aaPredicted RBP17.59■□□□□ 0.41
MTCL1-208ENST00000519823 COL23A1Q86Y22 540 aaPredicted RBP17.58■□□□□ 0.4
MTCL1-208ENST00000519823 NCAPD2Q15021 1401 aa17.57■□□□□ 0.4
MTCL1-208ENST00000519823 PCDH11XQ9BZA7 1347 aa17.57■□□□□ 0.4
MTCL1-208ENST00000519823 PCDH11YQ9BZA8 1340 aa17.57■□□□□ 0.4
MTCL1-208ENST00000519823 CYP27B1O15528 508 aa17.57■□□□□ 0.4
MTCL1-208ENST00000519823 GPR162Q16538 588 aa17.57■□□□□ 0.4
MTCL1-208ENST00000519823 TAF1LQ8IZX4 1826 aa17.56■□□□□ 0.4
MTCL1-208ENST00000519823 NLGN2Q8NFZ4 835 aa17.55■□□□□ 0.4
MTCL1-208ENST00000519823 TIMELESSQ9UNS1 1208 aa17.55■□□□□ 0.4
MTCL1-208ENST00000519823 EMILIN1Q9Y6C2 1016 aa17.54■□□□□ 0.4
MTCL1-208ENST00000519823 PKD1L3Q7Z443 1732 aa17.54■□□□□ 0.4
MTCL1-208ENST00000519823 C5P01031 1676 aa17.54■□□□□ 0.4
MTCL1-208ENST00000519823 ITGB4P16144 1822 aa17.54■□□□□ 0.4
MTCL1-208ENST00000519823 HMGB2P26583 209 aaKnown RBP17.53■□□□□ 0.4
MTCL1-208ENST00000519823 NKX1-1Q15270 411 aaPredicted RBP17.53■□□□□ 0.4
MTCL1-208ENST00000519823 NSD3Q9BZ95 1437 aa17.53■□□□□ 0.4
MTCL1-208ENST00000519823 PALLDQ8WX93 1383 aa17.53■□□□□ 0.4
MTCL1-208ENST00000519823 ANKRD26Q9UPS8 1709 aa17.52■□□□□ 0.4
MTCL1-208ENST00000519823 TOGARAM1Q9Y4F4 1720 aa17.52■□□□□ 0.4
MTCL1-208ENST00000519823 KLHL34Q8N239 644 aa17.52■□□□□ 0.4
MTCL1-208ENST00000519823 FLAD1Q8NFF5 587 aa17.52■□□□□ 0.4
MTCL1-208ENST00000519823 WASHC2AQ641Q2 1341 aa17.51■□□□□ 0.39
MTCL1-208ENST00000519823 MPRIPQ6WCQ1 1025 aa17.51■□□□□ 0.39
MTCL1-208ENST00000519823 MAP2P11137 1827 aaKnown RBP17.5■□□□□ 0.39
MTCL1-208ENST00000519823 PIGBQ92521 554 aa17.5■□□□□ 0.39
MTCL1-208ENST00000519823 SMARCC1Q92922 1105 aaPredicted RBP17.5■□□□□ 0.39
MTCL1-208ENST00000519823 MSH5O43196 834 aa17.49■□□□□ 0.39
MTCL1-208ENST00000519823 YBX3P16989 372 aaKnown RBP eCLIP17.49■□□□□ 0.39
MTCL1-208ENST00000519823 C1QTNF8P60827 252 aa17.49■□□□□ 0.39
MTCL1-208ENST00000519823 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.49■□□□□ 0.39
MTCL1-208ENST00000519823 C4BP0C0L5 1744 aa17.48■□□□□ 0.39
MTCL1-208ENST00000519823 MSL1Q68DK7 614 aa17.48■□□□□ 0.39
MTCL1-208ENST00000519823 EYA1Q99502 592 aa17.48■□□□□ 0.39
MTCL1-208ENST00000519823 POLKQ9UBT6 870 aa17.48■□□□□ 0.39
MTCL1-208ENST00000519823 GRIN3BO60391 1043 aa17.47■□□□□ 0.39
MTCL1-208ENST00000519823 AMIGO3Q86WK7 504 aa17.47■□□□□ 0.39
MTCL1-208ENST00000519823 PELP1Q8IZL8 1130 aaKnown RBP17.47■□□□□ 0.39
MTCL1-208ENST00000519823 SPG7Q9UQ90 795 aa17.47■□□□□ 0.39
MTCL1-208ENST00000519823 CD2APQ9Y5K6 639 aa17.47■□□□□ 0.39
MTCL1-208ENST00000519823 UBR3Q6ZT12 1888 aa17.47■□□□□ 0.39
MTCL1-208ENST00000519823 GOLGB1Q14789 3259 aaKnown RBP17.47■□□□□ 0.39
MTCL1-208ENST00000519823 PPM1GO15355 546 aaPredicted RBP17.44■□□□□ 0.38
MTCL1-208ENST00000519823 PLEKHG2Q9H7P9 1386 aa17.43■□□□□ 0.38
MTCL1-208ENST00000519823 LOC102724428A0A0B4J2F2 783 aa17.43■□□□□ 0.38
MTCL1-208ENST00000519823 SIK1P57059 783 aa17.43■□□□□ 0.38
MTCL1-208ENST00000519823 AK7Q96M32 723 aa17.43■□□□□ 0.38
MTCL1-208ENST00000519823 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.42■□□□□ 0.38
MTCL1-208ENST00000519823 PHKG2P15735 406 aa17.42■□□□□ 0.38
MTCL1-208ENST00000519823 SSFA2P28290 1259 aa17.41■□□□□ 0.38
MTCL1-208ENST00000519823 EIF4A2Q14240 407 aaKnown RBP17.41■□□□□ 0.38
MTCL1-208ENST00000519823 SMIM5Q71RC9 77 aa17.41■□□□□ 0.38
MTCL1-208ENST00000519823 IFNL2Q8IZJ0 200 aa17.41■□□□□ 0.38
MTCL1-208ENST00000519823 LINC00116Q8NCU8 138 aa17.41■□□□□ 0.38
MTCL1-208ENST00000519823 ASAP1Q9ULH1 1129 aa17.41■□□□□ 0.38
MTCL1-208ENST00000519823 SENP3-EIF4A1A0A087X0R7 540 aa17.4■□□□□ 0.38
MTCL1-208ENST00000519823 GIGYF1O75420 1035 aaPredicted RBP17.4■□□□□ 0.38
MTCL1-208ENST00000519823 ITPK1Q13572 414 aa17.4■□□□□ 0.38
MTCL1-208ENST00000519823 TMOD3Q9NYL9 352 aa17.4■□□□□ 0.38
MTCL1-208ENST00000519823 ATG3Q9NT62 314 aa17.39■□□□□ 0.37
MTCL1-208ENST00000519823 PHF14O94880 888 aa17.38■□□□□ 0.37
MTCL1-208ENST00000519823 IGSF1Q8N6C5 1336 aa17.38■□□□□ 0.37
MTCL1-208ENST00000519823 ZNF831Q5JPB2 1677 aa17.36■□□□□ 0.37
MTCL1-208ENST00000519823 ATP6V1AP38606 617 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms