RNA–Protein interactions for RNA: ENST00000519788.6

SCUBE2-206, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5

Gene SCUBE2, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-206ENST00000519788 RTL1A6NKG5 1358 aa10.84□□□□□ -0.67
SCUBE2-206ENST00000519788 NSD2O96028 1365 aa10.83□□□□□ -0.68
SCUBE2-206ENST00000519788 PAXIP1Q6ZW49 1069 aaPredicted RBP10.83□□□□□ -0.68
SCUBE2-206ENST00000519788 POLKQ9UBT6 870 aa10.83□□□□□ -0.68
SCUBE2-206ENST00000519788 LRRC37A3O60309 1634 aa10.83□□□□□ -0.68
SCUBE2-206ENST00000519788 FAM208AQ9UK61 1670 aaKnown RBP10.82□□□□□ -0.68
SCUBE2-206ENST00000519788 INSRP06213 1382 aa10.82□□□□□ -0.68
SCUBE2-206ENST00000519788 FLT4P35916 1363 aa10.82□□□□□ -0.68
SCUBE2-206ENST00000519788 CNGB1Q14028 1251 aaPredicted RBP10.82□□□□□ -0.68
SCUBE2-206ENST00000519788 DISP2A7MBM2 1401 aa10.82□□□□□ -0.68
SCUBE2-206ENST00000519788 KIF24Q5T7B8 1368 aa10.81□□□□□ -0.68
SCUBE2-206ENST00000519788 DDB1Q16531 1140 aa10.81□□□□□ -0.68
SCUBE2-206ENST00000519788 NBPF6Q5VWK0 638 aa10.81□□□□□ -0.68
SCUBE2-206ENST00000519788 NBPF4Q96M43 638 aa10.81□□□□□ -0.68
SCUBE2-206ENST00000519788 CDCA7Q9BWT1 371 aaPredicted RBP10.81□□□□□ -0.68
SCUBE2-206ENST00000519788 IL2RBP14784 551 aa10.8□□□□□ -0.68
SCUBE2-206ENST00000519788 ZEB1P37275 1124 aaPredicted RBP10.8□□□□□ -0.68
SCUBE2-206ENST00000519788 CC2D1BQ5T0F9 858 aaKnown RBP10.8□□□□□ -0.68
SCUBE2-206ENST00000519788 CCDC125Q86Z20 511 aa10.8□□□□□ -0.68
SCUBE2-206ENST00000519788 PLCD3Q8N3E9 789 aa10.8□□□□□ -0.68
SCUBE2-206ENST00000519788 USHBP1Q8N6Y0 703 aa10.8□□□□□ -0.68
SCUBE2-206ENST00000519788 CFAP44Q96MT7 982 aa10.8□□□□□ -0.68
SCUBE2-206ENST00000519788 SMG6Q86US8 1419 aaKnown RBP10.79□□□□□ -0.68
SCUBE2-206ENST00000519788 EXOC5O00471 708 aa10.79□□□□□ -0.68
SCUBE2-206ENST00000519788 RGL2O15211 777 aa10.79□□□□□ -0.68
SCUBE2-206ENST00000519788 FAM196AQ6ZSG2 479 aa10.79□□□□□ -0.68
SCUBE2-206ENST00000519788 MARCH10Q8NA82 808 aaPredicted RBP10.79□□□□□ -0.68
SCUBE2-206ENST00000519788 TRIM37O94972 964 aa10.78□□□□□ -0.68
SCUBE2-206ENST00000519788 RGPD1P0DJD0 1748 aa10.78□□□□□ -0.68
SCUBE2-206ENST00000519788 SF3B2Q13435 895 aaKnown RBP10.77□□□□□ -0.69
SCUBE2-206ENST00000519788 DEFB132Q7Z7B7 95 aa10.77□□□□□ -0.69
SCUBE2-206ENST00000519788 TNS1Q9HBL0 1735 aaKnown RBP10.77□□□□□ -0.69
SCUBE2-206ENST00000519788 OVOS2A0A0G2JMS6 1433 aa10.76□□□□□ -0.69
SCUBE2-206ENST00000519788 TNS2Q63HR2 1409 aa10.76□□□□□ -0.69
SCUBE2-206ENST00000519788 MEGF6O75095 1541 aa10.76□□□□□ -0.69
SCUBE2-206ENST00000519788 EIF4A2Q14240 407 aaKnown RBP10.76□□□□□ -0.69
SCUBE2-206ENST00000519788 EYA1Q99502 592 aa10.76□□□□□ -0.69
SCUBE2-206ENST00000519788 SBF2Q86WG5 1849 aa10.76□□□□□ -0.69
SCUBE2-206ENST00000519788 NPC1L1Q9UHC9 1359 aa10.76□□□□□ -0.69
SCUBE2-206ENST00000519788 MTHFSP49914 203 aa10.75□□□□□ -0.69
SCUBE2-206ENST00000519788 PTF1AQ7RTS3 328 aa10.75□□□□□ -0.69
SCUBE2-206ENST00000519788 DDX54Q8TDD1 881 aaKnown RBP10.75□□□□□ -0.69
SCUBE2-206ENST00000519788 SSUH2Q9Y2M2 353 aa10.75□□□□□ -0.69
SCUBE2-206ENST00000519788 SPDYE2BA6NHP3 402 aa10.74□□□□□ -0.69
SCUBE2-206ENST00000519788 APBA3O96018 575 aa10.74□□□□□ -0.69
SCUBE2-206ENST00000519788 SPDYE6P0CI01 402 aa10.74□□□□□ -0.69
SCUBE2-206ENST00000519788 SPDYE2Q495Y8 402 aa10.74□□□□□ -0.69
SCUBE2-206ENST00000519788 MIER1Q8N108 512 aa10.74□□□□□ -0.69
SCUBE2-206ENST00000519788 ZCRB1Q8TBF4 217 aaKnown RBP10.74□□□□□ -0.69
SCUBE2-206ENST00000519788 RAPGEF4Q8WZA2 1011 aa10.74□□□□□ -0.69
SCUBE2-206ENST00000519788 SHANK3Q9BYB0 1731 aa10.74□□□□□ -0.69
SCUBE2-206ENST00000519788 TATP17735 454 aaPredicted RBP10.73□□□□□ -0.69
SCUBE2-206ENST00000519788 BAG6P46379 1132 aa10.73□□□□□ -0.69
SCUBE2-206ENST00000519788 EN1Q05925 392 aaPredicted RBP10.73□□□□□ -0.69
SCUBE2-206ENST00000519788 DDX10Q13206 875 aaKnown RBP10.73□□□□□ -0.69
SCUBE2-206ENST00000519788 NCAPD2Q15021 1401 aa10.73□□□□□ -0.69
SCUBE2-206ENST00000519788 KCNQ2O43526 872 aa10.72□□□□□ -0.69
SCUBE2-206ENST00000519788 ACSBG1Q96GR2 724 aa10.72□□□□□ -0.69
SCUBE2-206ENST00000519788 BCL9O00512 1426 aa10.72□□□□□ -0.69
SCUBE2-206ENST00000519788 IL13P35225 146 aa10.71□□□□□ -0.69
SCUBE2-206ENST00000519788 EZH2Q15910 746 aaKnown RBP10.71□□□□□ -0.69
SCUBE2-206ENST00000519788 IGSF1Q8N6C5 1336 aa10.71□□□□□ -0.69
SCUBE2-206ENST00000519788 BCL11BQ9C0K0 894 aaPredicted RBP10.71□□□□□ -0.69
SCUBE2-206ENST00000519788 DSG3P32926 999 aa10.7□□□□□ -0.7
SCUBE2-206ENST00000519788 AEBP1Q8IUX7 1158 aa10.7□□□□□ -0.7
SCUBE2-206ENST00000519788 SPRYD3Q8NCJ5 442 aa10.7□□□□□ -0.7
SCUBE2-206ENST00000519788 CAMKK2Q96RR4 588 aa10.7□□□□□ -0.7
SCUBE2-206ENST00000519788 PKD1L3Q7Z443 1732 aa10.7□□□□□ -0.7
SCUBE2-206ENST00000519788 NHSQ6T4R5 1651 aa10.69□□□□□ -0.7
SCUBE2-206ENST00000519788 KAT6BQ8WYB5 2073 aa10.69□□□□□ -0.7
SCUBE2-206ENST00000519788 CYP27B1O15528 508 aa10.69□□□□□ -0.7
SCUBE2-206ENST00000519788 PPP2R1AP30153 589 aa10.69□□□□□ -0.7
SCUBE2-206ENST00000519788 TPRNQ4KMQ1 711 aa10.69□□□□□ -0.7
SCUBE2-206ENST00000519788 SULT6B1Q6IMI4 303 aa10.69□□□□□ -0.7
SCUBE2-206ENST00000519788 TSHZ2Q9NRE2 1034 aa10.69□□□□□ -0.7
SCUBE2-206ENST00000519788 DOT1LQ8TEK3 1739 aa10.69□□□□□ -0.7
SCUBE2-206ENST00000519788 PCDH11XQ9BZA7 1347 aa10.68□□□□□ -0.7
SCUBE2-206ENST00000519788 PCDH11YQ9BZA8 1340 aa10.68□□□□□ -0.7
SCUBE2-206ENST00000519788 DIAPH1O60610 1272 aaKnown RBP10.68□□□□□ -0.7
SCUBE2-206ENST00000519788 PRIM1P49642 420 aaKnown RBP10.68□□□□□ -0.7
SCUBE2-206ENST00000519788 SPG7Q9UQ90 795 aa10.68□□□□□ -0.7
SCUBE2-206ENST00000519788 COL3A1P02461 1466 aaPredicted RBP10.68□□□□□ -0.7
SCUBE2-206ENST00000519788 BTAF1O14981 1849 aa10.68□□□□□ -0.7
SCUBE2-206ENST00000519788 SYTL4Q96C24 671 aaPredicted RBP10.67□□□□□ -0.7
SCUBE2-206ENST00000519788 RREB1Q92766 1687 aa10.66□□□□□ -0.7
SCUBE2-206ENST00000519788 PLSCR1O15162 318 aa10.66□□□□□ -0.7
SCUBE2-206ENST00000519788 HMOX1P09601 288 aa10.66□□□□□ -0.7
SCUBE2-206ENST00000519788 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.66□□□□□ -0.7
SCUBE2-206ENST00000519788 CIZ1Q9ULV3 898 aaPredicted RBP10.66□□□□□ -0.7
SCUBE2-206ENST00000519788 KDRP35968 1356 aa10.65□□□□□ -0.7
SCUBE2-206ENST00000519788 PARD3Q8TEW0 1356 aa10.65□□□□□ -0.7
SCUBE2-206ENST00000519788 RGPD3A6NKT7 1758 aaPredicted RBP10.65□□□□□ -0.7
SCUBE2-206ENST00000519788 RGPD4Q7Z3J3 1758 aa10.65□□□□□ -0.7
SCUBE2-206ENST00000519788 NUP188Q5SRE5 1749 aa10.65□□□□□ -0.7
SCUBE2-206ENST00000519788 U2SURPO15042 1029 aaKnown RBP10.65□□□□□ -0.7
SCUBE2-206ENST00000519788 CFAP53Q96M91 514 aa10.65□□□□□ -0.7
SCUBE2-206ENST00000519788 TOGARAM1Q9Y4F4 1720 aa10.64□□□□□ -0.71
SCUBE2-206ENST00000519788 PSDA5PKW4 1024 aaPredicted RBP10.64□□□□□ -0.71
SCUBE2-206ENST00000519788 ZNF316A6NFI3 1004 aaPredicted RBP10.64□□□□□ -0.71
SCUBE2-206ENST00000519788 PHKG2P15735 406 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms