RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 OVOS2A0A0G2JMS6 1433 aa15.97■□□□□ 0.15
HPS4-218ENST00000519774 TATP17735 454 aaPredicted RBP15.97■□□□□ 0.15
HPS4-218ENST00000519774 IGSF1Q8N6C5 1336 aa15.96■□□□□ 0.15
HPS4-218ENST00000519774 UPF1Q92900 1129 aaKnown RBP eCLIP15.96■□□□□ 0.15
HPS4-218ENST00000519774 CFAP53Q96M91 514 aa15.96■□□□□ 0.15
HPS4-218ENST00000519774 SHANK3Q9BYB0 1731 aa15.95■□□□□ 0.14
HPS4-218ENST00000519774 DIAPH1O60610 1272 aaKnown RBP15.95■□□□□ 0.14
HPS4-218ENST00000519774 IL13P35225 146 aa15.95■□□□□ 0.14
HPS4-218ENST00000519774 RALBP1Q15311 655 aa15.95■□□□□ 0.14
HPS4-218ENST00000519774 MARCH10Q8NA82 808 aaPredicted RBP15.95■□□□□ 0.14
HPS4-218ENST00000519774 FAM196AQ6ZSG2 479 aa15.94■□□□□ 0.14
HPS4-218ENST00000519774 PKD1L3Q7Z443 1732 aa15.94■□□□□ 0.14
HPS4-218ENST00000519774 U2SURPO15042 1029 aaKnown RBP15.93■□□□□ 0.14
HPS4-218ENST00000519774 AEBP1Q8IUX7 1158 aa15.93■□□□□ 0.14
HPS4-218ENST00000519774 ZCRB1Q8TBF4 217 aaKnown RBP15.93■□□□□ 0.14
HPS4-218ENST00000519774 DDX54Q8TDD1 881 aaKnown RBP15.93■□□□□ 0.14
HPS4-218ENST00000519774 SULT6B1Q6IMI4 303 aa15.92■□□□□ 0.14
HPS4-218ENST00000519774 HMOX1P09601 288 aa15.91■□□□□ 0.14
HPS4-218ENST00000519774 SBF2Q86WG5 1849 aa15.91■□□□□ 0.14
HPS4-218ENST00000519774 MYBBP1AQ9BQG0 1328 aaKnown RBP15.91■□□□□ 0.14
HPS4-218ENST00000519774 TNS1Q9HBL0 1735 aaKnown RBP15.91■□□□□ 0.14
HPS4-218ENST00000519774 TRIM37O94972 964 aa15.9■□□□□ 0.14
HPS4-218ENST00000519774 SF3B2Q13435 895 aaKnown RBP15.9■□□□□ 0.14
HPS4-218ENST00000519774 PRKRIP1Q9H875 184 aaPredicted RBP15.9■□□□□ 0.14
HPS4-218ENST00000519774 PCDH11XQ9BZA7 1347 aa15.9■□□□□ 0.14
HPS4-218ENST00000519774 PCDH11YQ9BZA8 1340 aa15.9■□□□□ 0.14
HPS4-218ENST00000519774 KDRP35968 1356 aa15.89■□□□□ 0.13
HPS4-218ENST00000519774 EP400Q96L91 3159 aa15.89■□□□□ 0.13
HPS4-218ENST00000519774 DOT1LQ8TEK3 1739 aa15.88■□□□□ 0.13
HPS4-218ENST00000519774 SPG7Q9UQ90 795 aa15.88■□□□□ 0.13
HPS4-218ENST00000519774 NUDCQ9Y266 331 aa15.88■□□□□ 0.13
HPS4-218ENST00000519774 KAT6BQ8WYB5 2073 aa15.88■□□□□ 0.13
HPS4-218ENST00000519774 NHSQ6T4R5 1651 aa15.87■□□□□ 0.13
HPS4-218ENST00000519774 SLC4A2P04920 1241 aa15.87■□□□□ 0.13
HPS4-218ENST00000519774 ACSBG1Q96GR2 724 aa15.87■□□□□ 0.13
HPS4-218ENST00000519774 BCL9O00512 1426 aa15.86■□□□□ 0.13
HPS4-218ENST00000519774 CYP27B1O15528 508 aa15.86■□□□□ 0.13
HPS4-218ENST00000519774 CCDC125Q86Z20 511 aa15.86■□□□□ 0.13
HPS4-218ENST00000519774 U2AF1L5P0DN76 240 aaPredicted RBP15.85■□□□□ 0.13
HPS4-218ENST00000519774 U2AF1Q01081 240 aaKnown RBP eCLIP15.85■□□□□ 0.13
HPS4-218ENST00000519774 PLEKHO1Q53GL0 409 aaPredicted RBP15.85■□□□□ 0.13
HPS4-218ENST00000519774 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.85■□□□□ 0.13
HPS4-218ENST00000519774 PLEKHG2Q9H7P9 1386 aa15.85■□□□□ 0.13
HPS4-218ENST00000519774 ANP32CO43423 234 aa15.84■□□□□ 0.13
HPS4-218ENST00000519774 ZNF530Q6P9A1 599 aaPredicted RBP15.84■□□□□ 0.13
HPS4-218ENST00000519774 PTF1AQ7RTS3 328 aa15.84■□□□□ 0.13
HPS4-218ENST00000519774 DEFB132Q7Z7B7 95 aa15.84■□□□□ 0.13
HPS4-218ENST00000519774 TOGARAM1Q9Y4F4 1720 aa15.83■□□□□ 0.13
HPS4-218ENST00000519774 APBA3O96018 575 aa15.83■□□□□ 0.12
HPS4-218ENST00000519774 BAG6P46379 1132 aa15.83■□□□□ 0.12
HPS4-218ENST00000519774 AMOTQ4VCS5 1084 aa15.83■□□□□ 0.12
HPS4-218ENST00000519774 SYTL4Q96C24 671 aaPredicted RBP15.83■□□□□ 0.12
HPS4-218ENST00000519774 BTAF1O14981 1849 aa15.82■□□□□ 0.12
HPS4-218ENST00000519774 KCNQ2O43526 872 aa15.82■□□□□ 0.12
HPS4-218ENST00000519774 PHKG2P15735 406 aa15.82■□□□□ 0.12
HPS4-218ENST00000519774 IFNL2Q8IZJ0 200 aa15.82■□□□□ 0.12
HPS4-218ENST00000519774 BCL11BQ9C0K0 894 aaPredicted RBP15.82■□□□□ 0.12
HPS4-218ENST00000519774 PRKAR2BP31323 418 aa15.81■□□□□ 0.12
HPS4-218ENST00000519774 EN1Q05925 392 aaPredicted RBP15.81■□□□□ 0.12
HPS4-218ENST00000519774 RSPH6AQ9H0K4 717 aa15.81■□□□□ 0.12
HPS4-218ENST00000519774 C1orf141Q5JVX7 400 aa15.8■□□□□ 0.12
HPS4-218ENST00000519774 PRIM1P49642 420 aaKnown RBP15.79■□□□□ 0.12
HPS4-218ENST00000519774 FOXD4L1Q9NU39 408 aa15.79■□□□□ 0.12
HPS4-218ENST00000519774 ITGB4P16144 1822 aa15.79■□□□□ 0.12
HPS4-218ENST00000519774 NKX1-1Q15270 411 aaPredicted RBP15.78■□□□□ 0.12
HPS4-218ENST00000519774 MTHFSDQ2M296 383 aaKnown RBP15.78■□□□□ 0.12
HPS4-218ENST00000519774 RGPD3A6NKT7 1758 aaPredicted RBP15.77■□□□□ 0.12
HPS4-218ENST00000519774 RGPD4Q7Z3J3 1758 aa15.77■□□□□ 0.12
HPS4-218ENST00000519774 FCHSD2O94868 740 aa15.77■□□□□ 0.12
HPS4-218ENST00000519774 HSP90AB1P08238 724 aaKnown RBP15.77■□□□□ 0.12
HPS4-218ENST00000519774 WDR43Q15061 677 aaKnown RBP eCLIP15.77■□□□□ 0.12
HPS4-218ENST00000519774 EZH2Q15910 746 aaKnown RBP15.77■□□□□ 0.12
HPS4-218ENST00000519774 KDM6AO15550 1401 aaPredicted RBP15.77■□□□□ 0.11
HPS4-218ENST00000519774 VIRMAQ69YN4 1812 aaKnown RBP15.76■□□□□ 0.11
HPS4-218ENST00000519774 ZBTB22O15209 634 aa15.76■□□□□ 0.11
HPS4-218ENST00000519774 MPRIPQ6WCQ1 1025 aa15.76■□□□□ 0.11
HPS4-218ENST00000519774 DCAF5Q96JK2 942 aa15.76■□□□□ 0.11
HPS4-218ENST00000519774 PHACTR3Q96KR7 559 aa15.76■□□□□ 0.11
HPS4-218ENST00000519774 RREB1Q92766 1687 aa15.76■□□□□ 0.11
HPS4-218ENST00000519774 SCN11AQ9UI33 1791 aa15.75■□□□□ 0.11
HPS4-218ENST00000519774 NEFMP07197 916 aa15.75■□□□□ 0.11
HPS4-218ENST00000519774 AKAP4Q5JQC9 854 aa15.75■□□□□ 0.11
HPS4-218ENST00000519774 GAS2L2Q8NHY3 880 aa15.75■□□□□ 0.11
HPS4-218ENST00000519774 CAMKK2Q96RR4 588 aa15.75■□□□□ 0.11
HPS4-218ENST00000519774 CCDC184Q52MB2 194 aa15.74■□□□□ 0.11
HPS4-218ENST00000519774 TMOD3Q9NYL9 352 aa15.74■□□□□ 0.11
HPS4-218ENST00000519774 NUP188Q5SRE5 1749 aa15.74■□□□□ 0.11
HPS4-218ENST00000519774 MAP3K5Q99683 1374 aa15.74■□□□□ 0.11
HPS4-218ENST00000519774 MAPK8IP3Q9UPT6 1336 aa15.72■□□□□ 0.11
HPS4-218ENST00000519774 PLSCR1O15162 318 aa15.72■□□□□ 0.11
HPS4-218ENST00000519774 PIGBQ92521 554 aa15.72■□□□□ 0.11
HPS4-218ENST00000519774 MRS2Q9HD23 443 aa15.72■□□□□ 0.11
HPS4-218ENST00000519774 GNAT3A8MTJ3 354 aa15.71■□□□□ 0.11
HPS4-218ENST00000519774 RNMTO43148 476 aaKnown RBP15.71■□□□□ 0.11
HPS4-218ENST00000519774 CABP4P57796 275 aa15.71■□□□□ 0.11
HPS4-218ENST00000519774 CCDC146Q8IYE0 955 aa15.71■□□□□ 0.11
HPS4-218ENST00000519774 PNNQ9H307 717 aaKnown RBP15.71■□□□□ 0.11
HPS4-218ENST00000519774 DLG5Q8TDM6 1919 aa15.7■□□□□ 0.1
HPS4-218ENST00000519774 ADAMTS7Q9UKP4 1686 aa15.7■□□□□ 0.1
HPS4-218ENST00000519774 ERVV-2B6SEH9 535 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms