RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 ZBTB7CA1YPR0 619 aa23.65■■□□□ 1.38
FAM49B-214ENST00000519540 ELL2O00472 640 aaPredicted RBP23.64■■□□□ 1.38
FAM49B-214ENST00000519540 RTF1Q92541 710 aaKnown RBP23.64■■□□□ 1.38
FAM49B-214ENST00000519540 HTATSF1O43719 755 aaKnown RBP23.63■■□□□ 1.37
FAM49B-214ENST00000519540 NBPF6Q5VWK0 638 aa23.63■■□□□ 1.37
FAM49B-214ENST00000519540 NBPF4Q96M43 638 aa23.63■■□□□ 1.37
FAM49B-214ENST00000519540 PLEKHG5O94827 1062 aa23.62■■□□□ 1.37
FAM49B-214ENST00000519540 MRPL50Q8N5N7 158 aaKnown RBP23.62■■□□□ 1.37
FAM49B-214ENST00000519540 DDX17Q92841 729 aaKnown RBP23.62■■□□□ 1.37
FAM49B-214ENST00000519540 IGHDP01880 384 aa23.62■■□□□ 1.37
FAM49B-214ENST00000519540 USHBP1Q8N6Y0 703 aa23.62■■□□□ 1.37
FAM49B-214ENST00000519540 NPHP3Q7Z494 1330 aa23.6■■□□□ 1.37
FAM49B-214ENST00000519540 GNAT3A8MTJ3 354 aa23.59■■□□□ 1.37
FAM49B-214ENST00000519540 SKAP1Q86WV1 359 aa23.59■■□□□ 1.37
FAM49B-214ENST00000519540 KIAA0232Q92628 1395 aa23.59■■□□□ 1.37
FAM49B-214ENST00000519540 ARHGAP45Q92619 1136 aa23.59■■□□□ 1.37
FAM49B-214ENST00000519540 PCDHB15Q9Y5E8 787 aa23.59■■□□□ 1.37
FAM49B-214ENST00000519540 MED1Q15648 1581 aaPredicted RBP23.58■■□□□ 1.37
FAM49B-214ENST00000519540 ZNF335Q9H4Z2 1342 aaPredicted RBP23.58■■□□□ 1.37
FAM49B-214ENST00000519540 DDX19BQ9UMR2 479 aa23.57■■□□□ 1.36
FAM49B-214ENST00000519540 RGPD2P0DJD1 1756 aa23.57■■□□□ 1.36
FAM49B-214ENST00000519540 TMEM57Q8N5G2 664 aa23.57■■□□□ 1.36
FAM49B-214ENST00000519540 LRRC59Q96AG4 307 aaKnown RBP23.57■■□□□ 1.36
FAM49B-214ENST00000519540 ITPRIPQ8IWB1 547 aa23.56■■□□□ 1.36
FAM49B-214ENST00000519540 MAP3K5Q99683 1374 aa23.56■■□□□ 1.36
FAM49B-214ENST00000519540 HAP1P54257 671 aaPredicted RBP23.55■■□□□ 1.36
FAM49B-214ENST00000519540 KRT24Q2M2I5 525 aa23.55■■□□□ 1.36
FAM49B-214ENST00000519540 AXIN2Q9Y2T1 843 aa23.55■■□□□ 1.36
FAM49B-214ENST00000519540 PXDNQ92626 1479 aa23.55■■□□□ 1.36
FAM49B-214ENST00000519540 LRRC37A3O60309 1634 aa23.55■■□□□ 1.36
FAM49B-214ENST00000519540 ANKRD24Q8TF21 1146 aa23.55■■□□□ 1.36
FAM49B-214ENST00000519540 MIS18AQ9NYP9 233 aa23.55■■□□□ 1.36
FAM49B-214ENST00000519540 IL17REQ8NFR9 667 aa23.54■■□□□ 1.36
FAM49B-214ENST00000519540 TSPYL4Q9UJ04 414 aa23.54■■□□□ 1.36
FAM49B-214ENST00000519540 NCAPD2Q15021 1401 aa23.53■■□□□ 1.36
FAM49B-214ENST00000519540 TNS3Q68CZ2 1445 aa23.53■■□□□ 1.36
FAM49B-214ENST00000519540 ZC3H6P61129 1189 aaKnown RBP23.53■■□□□ 1.36
FAM49B-214ENST00000519540 BRINP3Q76B58 766 aa23.52■■□□□ 1.36
FAM49B-214ENST00000519540 SPATA31A3Q5VYP0 1347 aa23.51■■□□□ 1.35
FAM49B-214ENST00000519540 RGPD5Q99666 1765 aa23.5■■□□□ 1.35
FAM49B-214ENST00000519540 RWDD1Q9H446 243 aaPredicted RBP23.5■■□□□ 1.35
FAM49B-214ENST00000519540 SLAIN2Q9P270 581 aa23.5■■□□□ 1.35
FAM49B-214ENST00000519540 ZBTB40Q9NUA8 1239 aa23.49■■□□□ 1.35
FAM49B-214ENST00000519540 CAMTA1Q9Y6Y1 1673 aa23.49■■□□□ 1.35
FAM49B-214ENST00000519540 PDE4AP27815 886 aa23.48■■□□□ 1.35
FAM49B-214ENST00000519540 API5Q9BZZ5 524 aaKnown RBP23.48■■□□□ 1.35
FAM49B-214ENST00000519540 BABAM1Q9NWV8 329 aa23.48■■□□□ 1.35
FAM49B-214ENST00000519540 ABCC4O15439 1325 aa23.48■■□□□ 1.35
FAM49B-214ENST00000519540 PLEKHO1Q53GL0 409 aaPredicted RBP23.47■■□□□ 1.35
FAM49B-214ENST00000519540 CABLES1Q8TDN4 633 aa23.47■■□□□ 1.35
FAM49B-214ENST00000519540 ERBB3P21860 1342 aa23.47■■□□□ 1.35
FAM49B-214ENST00000519540 TAF7Q15545 349 aaPredicted RBP23.47■■□□□ 1.35
FAM49B-214ENST00000519540 AMOTQ4VCS5 1084 aa23.46■■□□□ 1.35
FAM49B-214ENST00000519540 CEMIPQ8WUJ3 1361 aa23.46■■□□□ 1.35
FAM49B-214ENST00000519540 BACH2Q9BYV9 841 aa23.45■■□□□ 1.35
FAM49B-214ENST00000519540 CRYBG1Q9Y4K1 1723 aa23.45■■□□□ 1.34
FAM49B-214ENST00000519540 COL18A1P39060 1754 aa23.45■■□□□ 1.34
FAM49B-214ENST00000519540 ZBTB7BO15156 539 aaPredicted RBP23.44■■□□□ 1.34
FAM49B-214ENST00000519540 AKAP4Q5JQC9 854 aa23.44■■□□□ 1.34
FAM49B-214ENST00000519540 RGS3P49796 1198 aa23.43■■□□□ 1.34
FAM49B-214ENST00000519540 ZNF530Q6P9A1 599 aaPredicted RBP23.43■■□□□ 1.34
FAM49B-214ENST00000519540 LMO7Q8WWI1 1683 aa23.43■■□□□ 1.34
FAM49B-214ENST00000519540 HDAC1Q13547 482 aaPredicted RBP23.43■■□□□ 1.34
FAM49B-214ENST00000519540 CHMP4BQ9H444 224 aaKnown RBP23.43■■□□□ 1.34
FAM49B-214ENST00000519540 SOS2Q07890 1332 aaPredicted RBP23.42■■□□□ 1.34
FAM49B-214ENST00000519540 LGR6Q9HBX8 967 aa23.42■■□□□ 1.34
FAM49B-214ENST00000519540 SLC4A2P04920 1241 aa23.4■■□□□ 1.34
FAM49B-214ENST00000519540 ABCC6O95255 1503 aa23.4■■□□□ 1.34
FAM49B-214ENST00000519540 PTPRCP08575 1304 aa23.4■■□□□ 1.34
FAM49B-214ENST00000519540 CPDO75976 1380 aa23.39■■□□□ 1.34
FAM49B-214ENST00000519540 SOS1Q07889 1333 aaPredicted RBP23.39■■□□□ 1.34
FAM49B-214ENST00000519540 RGS12O14924 1447 aa23.38■■□□□ 1.33
FAM49B-214ENST00000519540 CHRNA2Q15822 529 aa23.38■■□□□ 1.33
FAM49B-214ENST00000519540 C1orf141Q5JVX7 400 aa23.38■■□□□ 1.33
FAM49B-214ENST00000519540 INTS3Q68E01 1043 aaKnown RBP23.38■■□□□ 1.33
FAM49B-214ENST00000519540 NLRP2Q9NX02 1062 aa23.38■■□□□ 1.33
FAM49B-214ENST00000519540 PDZRN3Q9UPQ7 1066 aa23.37■■□□□ 1.33
FAM49B-214ENST00000519540 MPRIPQ6WCQ1 1025 aa23.37■■□□□ 1.33
FAM49B-214ENST00000519540 RNMTO43148 476 aaKnown RBP23.35■■□□□ 1.33
FAM49B-214ENST00000519540 CCDC30Q5VVM6 783 aa23.35■■□□□ 1.33
FAM49B-214ENST00000519540 FAM208AQ9UK61 1670 aaKnown RBP23.35■■□□□ 1.33
FAM49B-214ENST00000519540 TEFQ10587 303 aa23.34■■□□□ 1.33
FAM49B-214ENST00000519540 RAPGEF4Q8WZA2 1011 aa23.34■■□□□ 1.33
FAM49B-214ENST00000519540 STK31Q9BXU1 1019 aa23.34■■□□□ 1.33
FAM49B-214ENST00000519540 OVOS2A0A0G2JMS6 1433 aa23.34■■□□□ 1.33
FAM49B-214ENST00000519540 CSB-PGBD3P0DP91 1061 aa23.33■■□□□ 1.33
FAM49B-214ENST00000519540 FAM161AQ3B820 660 aa23.33■■□□□ 1.33
FAM49B-214ENST00000519540 G2E3Q7L622 706 aa23.33■■□□□ 1.33
FAM49B-214ENST00000519540 KDM3BQ7LBC6 1761 aa23.33■■□□□ 1.32
FAM49B-214ENST00000519540 SMC5Q8IY18 1101 aa23.33■■□□□ 1.32
FAM49B-214ENST00000519540 VIRMAQ69YN4 1812 aaKnown RBP23.32■■□□□ 1.32
FAM49B-214ENST00000519540 EIF4A1P60842 406 aaKnown RBP23.32■■□□□ 1.32
FAM49B-214ENST00000519540 C8orf34Q49A92 452 aa23.31■■□□□ 1.32
FAM49B-214ENST00000519540 BTBD11A6QL63 1104 aa23.3■■□□□ 1.32
FAM49B-214ENST00000519540 TATP17735 454 aaPredicted RBP23.3■■□□□ 1.32
FAM49B-214ENST00000519540 C1orf115Q9H7X2 142 aa23.3■■□□□ 1.32
FAM49B-214ENST00000519540 NHSL1Q5SYE7 1610 aa23.29■■□□□ 1.32
FAM49B-214ENST00000519540 CACNA1FO60840 1977 aa23.29■■□□□ 1.32
FAM49B-214ENST00000519540 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.29■■□□□ 1.32
FAM49B-214ENST00000519540 ADAMTS7Q9UKP4 1686 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms