RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 YTHDC2Q9H6S0 1430 aaKnown RBP10.63□□□□□ -0.71
CTNNA1-216ENST00000519489 CPDO75976 1380 aa10.63□□□□□ -0.71
CTNNA1-216ENST00000519489 USP19O94966 1318 aa10.62□□□□□ -0.71
CTNNA1-216ENST00000519489 IGSF1Q8N6C5 1336 aa10.62□□□□□ -0.71
CTNNA1-216ENST00000519489 COL23A1Q86Y22 540 aaPredicted RBP10.62□□□□□ -0.71
CTNNA1-216ENST00000519489 SIRT1Q96EB6 747 aa10.62□□□□□ -0.71
CTNNA1-216ENST00000519489 RPGRIP1LQ68CZ1 1315 aa10.61□□□□□ -0.71
CTNNA1-216ENST00000519489 CICQ96RK0 1608 aaPredicted RBP10.6□□□□□ -0.71
CTNNA1-216ENST00000519489 ATMINO43313 823 aaPredicted RBP10.6□□□□□ -0.71
CTNNA1-216ENST00000519489 TFCP2L1Q9NZI6 479 aa10.6□□□□□ -0.71
CTNNA1-216ENST00000519489 KNDC1Q76NI1 1749 aa10.59□□□□□ -0.71
CTNNA1-216ENST00000519489 TUBGCP6Q96RT7 1819 aa10.59□□□□□ -0.71
CTNNA1-216ENST00000519489 MAP3K13O43283 966 aa10.59□□□□□ -0.71
CTNNA1-216ENST00000519489 PRAM1Q96QH2 718 aa10.59□□□□□ -0.71
CTNNA1-216ENST00000519489 NGDNQ8NEJ9 315 aaKnown RBP10.58□□□□□ -0.72
CTNNA1-216ENST00000519489 FAM212AQ96EL1 285 aa10.58□□□□□ -0.72
CTNNA1-216ENST00000519489 HIRIP3Q9BW71 556 aaPredicted RBP10.58□□□□□ -0.72
CTNNA1-216ENST00000519489 RRAGCQ9HB90 399 aa10.58□□□□□ -0.72
CTNNA1-216ENST00000519489 USP6P35125 1406 aa10.58□□□□□ -0.72
CTNNA1-216ENST00000519489 AXIN2Q9Y2T1 843 aa10.57□□□□□ -0.72
CTNNA1-216ENST00000519489 QSER1Q2KHR3 1735 aa10.56□□□□□ -0.72
CTNNA1-216ENST00000519489 CCDC85CA6NKD9 419 aa10.56□□□□□ -0.72
CTNNA1-216ENST00000519489 LBX1P52954 281 aa10.56□□□□□ -0.72
CTNNA1-216ENST00000519489 SMIM5Q71RC9 77 aa10.56□□□□□ -0.72
CTNNA1-216ENST00000519489 C16orf71Q8IYS4 520 aaPredicted RBP10.56□□□□□ -0.72
CTNNA1-216ENST00000519489 SLC39A7Q92504 469 aa10.56□□□□□ -0.72
CTNNA1-216ENST00000519489 KCPQ6ZWJ8 1503 aa10.56□□□□□ -0.72
CTNNA1-216ENST00000519489 PPLO60437 1756 aa10.56□□□□□ -0.72
CTNNA1-216ENST00000519489 NHSQ6T4R5 1651 aa10.56□□□□□ -0.72
CTNNA1-216ENST00000519489 BRD4O60885 1362 aaPredicted RBP10.55□□□□□ -0.72
CTNNA1-216ENST00000519489 GCP02774 474 aa10.55□□□□□ -0.72
CTNNA1-216ENST00000519489 TIE1P35590 1138 aa10.55□□□□□ -0.72
CTNNA1-216ENST00000519489 VASPP50552 380 aaPredicted RBP10.55□□□□□ -0.72
CTNNA1-216ENST00000519489 FAM50AQ14320 339 aaKnown RBP10.55□□□□□ -0.72
CTNNA1-216ENST00000519489 TOM1L2Q6ZVM7 507 aa10.55□□□□□ -0.72
CTNNA1-216ENST00000519489 MKRN1Q9UHC7 482 aaKnown RBP10.55□□□□□ -0.72
CTNNA1-216ENST00000519489 PDE4DIPQ5VU43 2346 aa10.54□□□□□ -0.72
CTNNA1-216ENST00000519489 C10orf71Q711Q0 1435 aa10.54□□□□□ -0.72
CTNNA1-216ENST00000519489 SMC1BQ8NDV3 1235 aa10.54□□□□□ -0.72
CTNNA1-216ENST00000519489 ANKRD30BQ9BXX2 1392 aa10.53□□□□□ -0.72
CTNNA1-216ENST00000519489 EXOC5O00471 708 aa10.53□□□□□ -0.72
CTNNA1-216ENST00000519489 C7P10643 843 aa10.53□□□□□ -0.72
CTNNA1-216ENST00000519489 CTCFP49711 727 aaPredicted RBP10.53□□□□□ -0.72
CTNNA1-216ENST00000519489 PIK3C2GO75747 1445 aa10.52□□□□□ -0.73
CTNNA1-216ENST00000519489 ZBTB7CA1YPR0 619 aa10.52□□□□□ -0.73
CTNNA1-216ENST00000519489 ATN1P54259 1190 aaPredicted RBP10.52□□□□□ -0.73
CTNNA1-216ENST00000519489 SLC27A3Q5K4L6 730 aa10.52□□□□□ -0.73
CTNNA1-216ENST00000519489 C9orf131Q5VYM1 1079 aa10.52□□□□□ -0.73
CTNNA1-216ENST00000519489 AMIGO3Q86WK7 504 aa10.52□□□□□ -0.73
CTNNA1-216ENST00000519489 BMP2KQ9NSY1 1161 aaPredicted RBP10.52□□□□□ -0.73
CTNNA1-216ENST00000519489 METRNQ9UJH8 293 aa10.52□□□□□ -0.73
CTNNA1-216ENST00000519489 WDR17Q8IZU2 1322 aa10.52□□□□□ -0.73
CTNNA1-216ENST00000519489 BTAF1O14981 1849 aa10.51□□□□□ -0.73
CTNNA1-216ENST00000519489 KIF1BO60333 1816 aa10.51□□□□□ -0.73
CTNNA1-216ENST00000519489 PXDNLA1KZ92 1463 aa10.51□□□□□ -0.73
CTNNA1-216ENST00000519489 HSPA8P11142 646 aaKnown RBP10.51□□□□□ -0.73
CTNNA1-216ENST00000519489 CDCA7Q9BWT1 371 aaPredicted RBP10.51□□□□□ -0.73
CTNNA1-216ENST00000519489 TRPC6Q9Y210 931 aa10.51□□□□□ -0.73
CTNNA1-216ENST00000519489 ERBB3P21860 1342 aa10.51□□□□□ -0.73
CTNNA1-216ENST00000519489 MINK1Q8N4C8 1332 aaPredicted RBP10.51□□□□□ -0.73
CTNNA1-216ENST00000519489 AKAP12Q02952 1782 aa10.5□□□□□ -0.73
CTNNA1-216ENST00000519489 POTEB2H3BUK9 544 aa10.5□□□□□ -0.73
CTNNA1-216ENST00000519489 PCDHB13Q9Y5F0 798 aa10.5□□□□□ -0.73
CTNNA1-216ENST00000519489 ROCK1Q13464 1354 aa10.5□□□□□ -0.73
CTNNA1-216ENST00000519489 WNK3Q9BYP7 1800 aa10.49□□□□□ -0.73
CTNNA1-216ENST00000519489 WASLO00401 505 aaPredicted RBP10.49□□□□□ -0.73
CTNNA1-216ENST00000519489 CFAP70Q5T0N1 1121 aa10.49□□□□□ -0.73
CTNNA1-216ENST00000519489 ARHGAP27Q6ZUM4 889 aa10.49□□□□□ -0.73
CTNNA1-216ENST00000519489 CARD10Q9BWT7 1032 aa10.49□□□□□ -0.73
CTNNA1-216ENST00000519489 C14orf93Q9H972 538 aaKnown RBP10.49□□□□□ -0.73
CTNNA1-216ENST00000519489 WBP1LQ9NX94 342 aa10.49□□□□□ -0.73
CTNNA1-216ENST00000519489 ABTB2Q8N961 1025 aa10.48□□□□□ -0.73
CTNNA1-216ENST00000519489 COL18A1P39060 1754 aa10.47□□□□□ -0.73
CTNNA1-216ENST00000519489 RGL3Q3MIN7 710 aa10.47□□□□□ -0.73
CTNNA1-216ENST00000519489 NUDT16Q96DE0 195 aaKnown RBP10.46□□□□□ -0.73
CTNNA1-216ENST00000519489 POGKQ9P215 609 aa10.46□□□□□ -0.73
CTNNA1-216ENST00000519489 BCS1LQ9Y276 419 aa10.46□□□□□ -0.73
CTNNA1-216ENST00000519489 ACEP12821 1306 aa10.46□□□□□ -0.73
CTNNA1-216ENST00000519489 POLR3AO14802 1390 aaPredicted RBP10.46□□□□□ -0.74
CTNNA1-216ENST00000519489 NSD2O96028 1365 aa10.46□□□□□ -0.74
CTNNA1-216ENST00000519489 SPATA31E1Q6ZUB1 1445 aa10.46□□□□□ -0.74
CTNNA1-216ENST00000519489 QRICH2Q9H0J4 1663 aa10.46□□□□□ -0.74
CTNNA1-216ENST00000519489 TRPM1Q7Z4N2 1603 aa10.45□□□□□ -0.74
CTNNA1-216ENST00000519489 CNTNAP1P78357 1384 aa10.45□□□□□ -0.74
CTNNA1-216ENST00000519489 A0A0G2JLW4 131 aa10.45□□□□□ -0.74
CTNNA1-216ENST00000519489 TTLL13PA6NNM8 815 aa10.45□□□□□ -0.74
CTNNA1-216ENST00000519489 POTECB2RU33 542 aa10.45□□□□□ -0.74
CTNNA1-216ENST00000519489 VEGFBP49765 207 aa10.45□□□□□ -0.74
CTNNA1-216ENST00000519489 DCAF8Q5TAQ9 597 aa10.45□□□□□ -0.74
CTNNA1-216ENST00000519489 OTUD5Q96G74 571 aa10.45□□□□□ -0.74
CTNNA1-216ENST00000519489 PPIP5K1Q6PFW1 1433 aa10.44□□□□□ -0.74
CTNNA1-216ENST00000519489 KDM2BQ8NHM5 1336 aa10.44□□□□□ -0.74
CTNNA1-216ENST00000519489 IFNL1Q8IU54 200 aa10.44□□□□□ -0.74
CTNNA1-216ENST00000519489 KIAA1551Q9HCM1 1747 aa10.44□□□□□ -0.74
CTNNA1-216ENST00000519489 ABCC6O95255 1503 aa10.43□□□□□ -0.74
CTNNA1-216ENST00000519489 PLEKHG2Q9H7P9 1386 aa10.42□□□□□ -0.74
CTNNA1-216ENST00000519489 NLRP13Q86W25 1043 aa10.42□□□□□ -0.74
CTNNA1-216ENST00000519489 AIDAQ96BJ3 306 aa10.42□□□□□ -0.74
CTNNA1-216ENST00000519489 CCNL1Q9UK58 526 aaPredicted RBP10.42□□□□□ -0.74
CTNNA1-216ENST00000519489 PRIM1P49642 420 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms