RNA–Protein interactions for RNA: ENST00000519470.1

MCM4-208, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 2

Gene MCM4, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-208ENST00000519470 KIF20BQ96Q89 1820 aa16.49■□□□□ 0.23
MCM4-208ENST00000519470 SYT17Q9BSW7 474 aa16.49■□□□□ 0.23
MCM4-208ENST00000519470 FHDC1Q9C0D6 1143 aaPredicted RBP16.49■□□□□ 0.23
MCM4-208ENST00000519470 CGNL1Q0VF96 1302 aa16.48■□□□□ 0.23
MCM4-208ENST00000519470 KIF24Q5T7B8 1368 aa16.48■□□□□ 0.23
MCM4-208ENST00000519470 TUBGCP6Q96RT7 1819 aa16.47■□□□□ 0.23
MCM4-208ENST00000519470 UTRNP46939 3433 aa16.47■□□□□ 0.23
MCM4-208ENST00000519470 TRIM26Q12899 539 aaPredicted RBP16.47■□□□□ 0.23
MCM4-208ENST00000519470 RRS1Q15050 365 aaKnown RBP16.47■□□□□ 0.23
MCM4-208ENST00000519470 ZCRB1Q8TBF4 217 aaKnown RBP16.47■□□□□ 0.23
MCM4-208ENST00000519470 SLC16A10Q8TF71 515 aa16.47■□□□□ 0.23
MCM4-208ENST00000519470 GGNBP2Q9H3C7 697 aa16.47■□□□□ 0.23
MCM4-208ENST00000519470 SMG6Q86US8 1419 aaKnown RBP16.46■□□□□ 0.23
MCM4-208ENST00000519470 CDCA8Q53HL2 280 aa16.46■□□□□ 0.23
MCM4-208ENST00000519470 NBPF6Q5VWK0 638 aa16.46■□□□□ 0.23
MCM4-208ENST00000519470 NBPF4Q96M43 638 aa16.46■□□□□ 0.23
MCM4-208ENST00000519470 INSRP06213 1382 aa16.46■□□□□ 0.23
MCM4-208ENST00000519470 PRIM1P49642 420 aaKnown RBP16.45■□□□□ 0.22
MCM4-208ENST00000519470 ARXQ96QS3 562 aa16.45■□□□□ 0.22
MCM4-208ENST00000519470 PNPLA7Q6ZV29 1317 aa16.45■□□□□ 0.22
MCM4-208ENST00000519470 FLT4P35916 1363 aa16.44■□□□□ 0.22
MCM4-208ENST00000519470 CHD4Q14839 1912 aa16.43■□□□□ 0.22
MCM4-208ENST00000519470 RAPGEF4Q8WZA2 1011 aa16.42■□□□□ 0.22
MCM4-208ENST00000519470 SYTL4Q96C24 671 aaPredicted RBP16.42■□□□□ 0.22
MCM4-208ENST00000519470 TIMELESSQ9UNS1 1208 aa16.42■□□□□ 0.22
MCM4-208ENST00000519470 NCAPD2Q15021 1401 aa16.42■□□□□ 0.22
MCM4-208ENST00000519470 ANKRD26Q9UPS8 1709 aa16.42■□□□□ 0.22
MCM4-208ENST00000519470 HSP90AB2PQ58FF8 381 aa16.41■□□□□ 0.22
MCM4-208ENST00000519470 USHBP1Q8N6Y0 703 aa16.41■□□□□ 0.22
MCM4-208ENST00000519470 PKD1L3Q7Z443 1732 aa16.4■□□□□ 0.22
MCM4-208ENST00000519470 TATP17735 454 aaPredicted RBP16.4■□□□□ 0.22
MCM4-208ENST00000519470 CARD14Q9BXL6 1004 aa16.4■□□□□ 0.22
MCM4-208ENST00000519470 TFCP2L1Q9NZI6 479 aa16.4■□□□□ 0.22
MCM4-208ENST00000519470 PCDH11XQ9BZA7 1347 aa16.4■□□□□ 0.22
MCM4-208ENST00000519470 PCDH11YQ9BZA8 1340 aa16.4■□□□□ 0.22
MCM4-208ENST00000519470 NSD3Q9BZ95 1437 aa16.39■□□□□ 0.21
MCM4-208ENST00000519470 KCNQ4P56696 695 aa16.39■□□□□ 0.21
MCM4-208ENST00000519470 CCNL1Q9UK58 526 aaPredicted RBP16.39■□□□□ 0.21
MCM4-208ENST00000519470 C5P01031 1676 aa16.38■□□□□ 0.21
MCM4-208ENST00000519470 POLD1P28340 1107 aa16.38■□□□□ 0.21
MCM4-208ENST00000519470 TOGARAM1Q9Y4F4 1720 aa16.37■□□□□ 0.21
MCM4-208ENST00000519470 TAF1LQ8IZX4 1826 aa16.37■□□□□ 0.21
MCM4-208ENST00000519470 CLSPNQ9HAW4 1339 aa16.37■□□□□ 0.21
MCM4-208ENST00000519470 ITGB4P16144 1822 aa16.36■□□□□ 0.21
MCM4-208ENST00000519470 ZNF784Q8NCA9 323 aaPredicted RBP16.36■□□□□ 0.21
MCM4-208ENST00000519470 EMILIN1Q9Y6C2 1016 aa16.36■□□□□ 0.21
MCM4-208ENST00000519470 CYP27B1O15528 508 aa16.35■□□□□ 0.21
MCM4-208ENST00000519470 HMGB2P26583 209 aaKnown RBP16.35■□□□□ 0.21
MCM4-208ENST00000519470 MAP2P11137 1827 aaKnown RBP16.34■□□□□ 0.21
MCM4-208ENST00000519470 WASHC2AQ641Q2 1341 aa16.34■□□□□ 0.21
MCM4-208ENST00000519470 PALLDQ8WX93 1383 aa16.34■□□□□ 0.21
MCM4-208ENST00000519470 NKX1-1Q15270 411 aaPredicted RBP16.32■□□□□ 0.2
MCM4-208ENST00000519470 COL23A1Q86Y22 540 aaPredicted RBP16.32■□□□□ 0.2
MCM4-208ENST00000519470 PLEKHG2Q9H7P9 1386 aa16.31■□□□□ 0.2
MCM4-208ENST00000519470 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.31■□□□□ 0.29e-7■□□□□ 10
MCM4-208ENST00000519470 C4BP0C0L5 1744 aa16.31■□□□□ 0.2
MCM4-208ENST00000519470 GPR162Q16538 588 aa16.3■□□□□ 0.2
MCM4-208ENST00000519470 FLAD1Q8NFF5 587 aa16.3■□□□□ 0.2
MCM4-208ENST00000519470 SMARCC1Q92922 1105 aaPredicted RBP16.3■□□□□ 0.2
MCM4-208ENST00000519470 UBR3Q6ZT12 1888 aa16.29■□□□□ 0.2
MCM4-208ENST00000519470 MPRIPQ6WCQ1 1025 aa16.29■□□□□ 0.2
MCM4-208ENST00000519470 NLGN2Q8NFZ4 835 aa16.29■□□□□ 0.2
MCM4-208ENST00000519470 GOLGB1Q14789 3259 aaKnown RBP16.29■□□□□ 0.2
MCM4-208ENST00000519470 KLHL34Q8N239 644 aa16.28■□□□□ 0.2
MCM4-208ENST00000519470 EYA1Q99502 592 aa16.28■□□□□ 0.2
MCM4-208ENST00000519470 POLKQ9UBT6 870 aa16.28■□□□□ 0.2
MCM4-208ENST00000519470 SPG7Q9UQ90 795 aa16.28■□□□□ 0.2
MCM4-208ENST00000519470 PIGBQ92521 554 aa16.27■□□□□ 0.2
MCM4-208ENST00000519470 PPM1GO15355 546 aaPredicted RBP16.26■□□□□ 0.19
MCM4-208ENST00000519470 MSH5O43196 834 aa16.26■□□□□ 0.19
MCM4-208ENST00000519470 PHKG2P15735 406 aa16.24■□□□□ 0.19
MCM4-208ENST00000519470 MSL1Q68DK7 614 aa16.24■□□□□ 0.19
MCM4-208ENST00000519470 IFNL2Q8IZJ0 200 aa16.24■□□□□ 0.19
MCM4-208ENST00000519470 AK7Q96M32 723 aa16.24■□□□□ 0.19
MCM4-208ENST00000519470 CD2APQ9Y5K6 639 aa16.24■□□□□ 0.19
MCM4-208ENST00000519470 GRIN3BO60391 1043 aa16.23■□□□□ 0.19
MCM4-208ENST00000519470 YBX3P16989 372 aaKnown RBP eCLIP16.23■□□□□ 0.19
MCM4-208ENST00000519470 EIF4A2Q14240 407 aaKnown RBP16.23■□□□□ 0.19
MCM4-208ENST00000519470 AMIGO3Q86WK7 504 aa16.23■□□□□ 0.19
MCM4-208ENST00000519470 IGSF1Q8N6C5 1336 aa16.22■□□□□ 0.19
MCM4-208ENST00000519470 LOC102724428A0A0B4J2F2 783 aa16.22■□□□□ 0.19
MCM4-208ENST00000519470 SSFA2P28290 1259 aa16.22■□□□□ 0.19
MCM4-208ENST00000519470 SIK1P57059 783 aa16.22■□□□□ 0.19
MCM4-208ENST00000519470 PELP1Q8IZL8 1130 aaKnown RBP16.22■□□□□ 0.19
MCM4-208ENST00000519470 TMOD3Q9NYL9 352 aa16.22■□□□□ 0.19
MCM4-208ENST00000519470 ZNF831Q5JPB2 1677 aa16.21■□□□□ 0.19
MCM4-208ENST00000519470 EIF4G2P78344 907 aaKnown RBP eCLIP16.21■□□□□ 0.19
MCM4-208ENST00000519470 LINC00116Q8NCU8 138 aa16.21■□□□□ 0.19
MCM4-208ENST00000519470 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.2■□□□□ 0.18
MCM4-208ENST00000519470 C1QTNF8P60827 252 aa16.2■□□□□ 0.18
MCM4-208ENST00000519470 ASAP1Q9ULH1 1129 aa16.2■□□□□ 0.18
MCM4-208ENST00000519470 KDRP35968 1356 aa16.19■□□□□ 0.18
MCM4-208ENST00000519470 HSPA5P11021 654 aaKnown RBP16.19■□□□□ 0.18
MCM4-208ENST00000519470 ITPK1Q13572 414 aa16.18■□□□□ 0.18
MCM4-208ENST00000519470 POLR3GLQ9BT43 218 aa16.18■□□□□ 0.18
MCM4-208ENST00000519470 PCGF6Q9BYE7 350 aa16.18■□□□□ 0.18
MCM4-208ENST00000519470 PANK3Q9H999 370 aa16.18■□□□□ 0.18
MCM4-208ENST00000519470 ATG3Q9NT62 314 aa16.18■□□□□ 0.18
MCM4-208ENST00000519470 ERVV-2B6SEH9 535 aa16.17■□□□□ 0.18
MCM4-208ENST00000519470 PHF14O94880 888 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms