RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 TFCP2L1Q9NZI6 479 aa12.11□□□□□ -0.47
CTNNA1-215ENST00000519309 MEGF6O75095 1541 aa12.1□□□□□ -0.47
CTNNA1-215ENST00000519309 C4BP0C0L5 1744 aa12.09□□□□□ -0.47
CTNNA1-215ENST00000519309 ROCK2O75116 1388 aaKnown RBP12.08□□□□□ -0.48
CTNNA1-215ENST00000519309 NME9Q86XW9 330 aa12.08□□□□□ -0.48
CTNNA1-215ENST00000519309 GPBP1L1Q9HC44 474 aaPredicted RBP12.08□□□□□ -0.48
CTNNA1-215ENST00000519309 KIF13BQ9NQT8 1826 aa12.08□□□□□ -0.48
CTNNA1-215ENST00000519309 KIAA1551Q9HCM1 1747 aa12.08□□□□□ -0.48
CTNNA1-215ENST00000519309 CD2APQ9Y5K6 639 aa12.07□□□□□ -0.48
CTNNA1-215ENST00000519309 A0A1W2PP64 1363 aa12.06□□□□□ -0.48
CTNNA1-215ENST00000519309 PKD1L3Q7Z443 1732 aa12.06□□□□□ -0.48
CTNNA1-215ENST00000519309 KCNQ4P56696 695 aa12.06□□□□□ -0.48
CTNNA1-215ENST00000519309 COL23A1Q86Y22 540 aaPredicted RBP12.06□□□□□ -0.48
CTNNA1-215ENST00000519309 CCNL1Q9UK58 526 aaPredicted RBP12.06□□□□□ -0.48
CTNNA1-215ENST00000519309 ITGB4P16144 1822 aa12.06□□□□□ -0.48
CTNNA1-215ENST00000519309 WDR90Q96KV7 1748 aa12.06□□□□□ -0.48
CTNNA1-215ENST00000519309 RTL1A6NKG5 1358 aa12.05□□□□□ -0.48
CTNNA1-215ENST00000519309 USP47Q96K76 1375 aa12.05□□□□□ -0.48
CTNNA1-215ENST00000519309 MAP2P11137 1827 aaKnown RBP12.05□□□□□ -0.48
CTNNA1-215ENST00000519309 PRIM1P49642 420 aaKnown RBP12.05□□□□□ -0.48
CTNNA1-215ENST00000519309 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.05□□□□□ -0.481e-6■■□□□ 12.4
CTNNA1-215ENST00000519309 IP6K1Q92551 441 aa12.05□□□□□ -0.48
CTNNA1-215ENST00000519309 DDX54Q8TDD1 881 aaKnown RBP12.04□□□□□ -0.48
CTNNA1-215ENST00000519309 NSD3Q9BZ95 1437 aa12.03□□□□□ -0.48
CTNNA1-215ENST00000519309 L3MBTL2Q969R5 705 aa12.03□□□□□ -0.48
CTNNA1-215ENST00000519309 SYTL4Q96C24 671 aaPredicted RBP12.03□□□□□ -0.48
CTNNA1-215ENST00000519309 BRCA1P38398 1863 aaKnown RBP12.03□□□□□ -0.48
CTNNA1-215ENST00000519309 HMGB2P26583 209 aaKnown RBP12.02□□□□□ -0.49
CTNNA1-215ENST00000519309 MSL1Q68DK7 614 aa12.02□□□□□ -0.49
CTNNA1-215ENST00000519309 FLAD1Q8NFF5 587 aa12.02□□□□□ -0.49
CTNNA1-215ENST00000519309 CGNL1Q0VF96 1302 aa12.02□□□□□ -0.49
CTNNA1-215ENST00000519309 KIF3CO14782 793 aa12.01□□□□□ -0.49
CTNNA1-215ENST00000519309 HDGFL2Q7Z4V5 671 aaPredicted RBP12.01□□□□□ -0.49
CTNNA1-215ENST00000519309 MAP3K19Q56UN5 1328 aa12.01□□□□□ -0.49
CTNNA1-215ENST00000519309 PALLDQ8WX93 1383 aa12.01□□□□□ -0.49
CTNNA1-215ENST00000519309 HOXC9P31274 260 aa12□□□□□ -0.49
CTNNA1-215ENST00000519309 ZCRB1Q8TBF4 217 aaKnown RBP12□□□□□ -0.49
CTNNA1-215ENST00000519309 IGSF1Q8N6C5 1336 aa12□□□□□ -0.49
CTNNA1-215ENST00000519309 ANKRD26Q9UPS8 1709 aa12□□□□□ -0.49
CTNNA1-215ENST00000519309 KIF20BQ96Q89 1820 aa12□□□□□ -0.49
CTNNA1-215ENST00000519309 MSH5O43196 834 aa11.99□□□□□ -0.49
CTNNA1-215ENST00000519309 APLP1P51693 650 aa11.99□□□□□ -0.49
CTNNA1-215ENST00000519309 PUS7Q96PZ0 661 aaKnown RBP11.99□□□□□ -0.49
CTNNA1-215ENST00000519309 ZNF831Q5JPB2 1677 aa11.99□□□□□ -0.49
CTNNA1-215ENST00000519309 ARFGEF1Q9Y6D6 1849 aa11.99□□□□□ -0.49
CTNNA1-215ENST00000519309 PXDNLA1KZ92 1463 aa11.98□□□□□ -0.49
CTNNA1-215ENST00000519309 NCAPD2Q15021 1401 aa11.98□□□□□ -0.49
CTNNA1-215ENST00000519309 SMG6Q86US8 1419 aaKnown RBP11.98□□□□□ -0.49
CTNNA1-215ENST00000519309 PCDH11XQ9BZA7 1347 aa11.98□□□□□ -0.49
CTNNA1-215ENST00000519309 PCDH11YQ9BZA8 1340 aa11.98□□□□□ -0.49
CTNNA1-215ENST00000519309 ZNF526Q8TF50 670 aaPredicted RBP11.98□□□□□ -0.49
CTNNA1-215ENST00000519309 TERF2IPQ9NYB0 399 aa11.98□□□□□ -0.49
CTNNA1-215ENST00000519309 N4BP2Q86UW6 1770 aaPredicted RBP11.97□□□□□ -0.49
CTNNA1-215ENST00000519309 LTV1Q96GA3 475 aaPredicted RBP11.97□□□□□ -0.49
CTNNA1-215ENST00000519309 DNAJC5GQ8N7S2 189 aa11.96□□□□□ -0.49
CTNNA1-215ENST00000519309 SLC12A5Q9H2X9 1139 aa11.96□□□□□ -0.49
CTNNA1-215ENST00000519309 TNRC6CQ9HCJ0 1690 aaKnown RBP11.96□□□□□ -0.5
CTNNA1-215ENST00000519309 C10orf71Q711Q0 1435 aa11.95□□□□□ -0.5
CTNNA1-215ENST00000519309 COL5A3P25940 1745 aaPredicted RBP11.95□□□□□ -0.5
CTNNA1-215ENST00000519309 AMIGO3Q86WK7 504 aa11.95□□□□□ -0.5
CTNNA1-215ENST00000519309 TMC1Q8TDI8 760 aa11.95□□□□□ -0.5
CTNNA1-215ENST00000519309 C4AP0C0L4 1744 aa11.94□□□□□ -0.5
CTNNA1-215ENST00000519309 KIF24Q5T7B8 1368 aa11.94□□□□□ -0.5
CTNNA1-215ENST00000519309 SSFA2P28290 1259 aa11.94□□□□□ -0.5
CTNNA1-215ENST00000519309 COG3Q96JB2 828 aa11.94□□□□□ -0.5
CTNNA1-215ENST00000519309 INSRP06213 1382 aa11.93□□□□□ -0.5
CTNNA1-215ENST00000519309 TOMM70O94826 608 aa11.93□□□□□ -0.5
CTNNA1-215ENST00000519309 AMPHP49418 695 aa11.93□□□□□ -0.5
CTNNA1-215ENST00000519309 NBPF6Q5VWK0 638 aa11.93□□□□□ -0.5
CTNNA1-215ENST00000519309 RAPGEF4Q8WZA2 1011 aa11.93□□□□□ -0.5
CTNNA1-215ENST00000519309 SMARCC1Q92922 1105 aaPredicted RBP11.93□□□□□ -0.5
CTNNA1-215ENST00000519309 AK7Q96M32 723 aa11.93□□□□□ -0.5
CTNNA1-215ENST00000519309 NBPF4Q96M43 638 aa11.93□□□□□ -0.5
CTNNA1-215ENST00000519309 PLEKHG2Q9H7P9 1386 aa11.92□□□□□ -0.5
CTNNA1-215ENST00000519309 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.92□□□□□ -0.5
CTNNA1-215ENST00000519309 FLT4P35916 1363 aa11.92□□□□□ -0.5
CTNNA1-215ENST00000519309 CYP27B1O15528 508 aa11.91□□□□□ -0.5
CTNNA1-215ENST00000519309 TATP17735 454 aaPredicted RBP11.91□□□□□ -0.5
CTNNA1-215ENST00000519309 KDRP35968 1356 aa11.91□□□□□ -0.5
CTNNA1-215ENST00000519309 USHBP1Q8N6Y0 703 aa11.9□□□□□ -0.5
CTNNA1-215ENST00000519309 JMYQ8N9B5 988 aa11.9□□□□□ -0.5
CTNNA1-215ENST00000519309 CARD11Q9BXL7 1154 aa11.9□□□□□ -0.5
CTNNA1-215ENST00000519309 PHF14O94880 888 aa11.89□□□□□ -0.51
CTNNA1-215ENST00000519309 FBLN1P23142 703 aa11.89□□□□□ -0.51
CTNNA1-215ENST00000519309 MPRIPQ6WCQ1 1025 aa11.89□□□□□ -0.51
CTNNA1-215ENST00000519309 RBM46Q8TBY0 533 aaKnown RBP11.89□□□□□ -0.51
CTNNA1-215ENST00000519309 SIN3AQ96ST3 1273 aa11.89□□□□□ -0.51
CTNNA1-215ENST00000519309 SBF1O95248 1867 aa11.89□□□□□ -0.51
CTNNA1-215ENST00000519309 LOC102724428A0A0B4J2F2 783 aa11.88□□□□□ -0.51
CTNNA1-215ENST00000519309 SIK1P57059 783 aa11.88□□□□□ -0.51
CTNNA1-215ENST00000519309 RRS1Q15050 365 aaKnown RBP11.88□□□□□ -0.51
CTNNA1-215ENST00000519309 NKX1-1Q15270 411 aaPredicted RBP11.88□□□□□ -0.51
CTNNA1-215ENST00000519309 LINC00116Q8NCU8 138 aa11.88□□□□□ -0.51
CTNNA1-215ENST00000519309 KLRG1Q96E93 195 aa11.88□□□□□ -0.51
CTNNA1-215ENST00000519309 TESK2Q96S53 571 aa11.88□□□□□ -0.51
CTNNA1-215ENST00000519309 WWC3Q9ULE0 1092 aa11.88□□□□□ -0.51
CTNNA1-215ENST00000519309 TGFB2P61812 414 aa11.87□□□□□ -0.51
CTNNA1-215ENST00000519309 PIGBQ92521 554 aa11.87□□□□□ -0.51
CTNNA1-215ENST00000519309 NMRK2Q9NPI5 230 aa11.87□□□□□ -0.51
CTNNA1-215ENST00000519309 PCNTO95613 3336 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms