RNA–Protein interactions for RNA: ENST00000519288.5

EXTL3-205, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 3

Gene EXTL3, Length 474 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-205ENST00000519288 KLHL34Q8N239 644 aa25.25■■□□□ 1.63
EXTL3-205ENST00000519288 ZCRB1Q8TBF4 217 aaKnown RBP25.25■■□□□ 1.63
EXTL3-205ENST00000519288 USHBP1Q8N6Y0 703 aa25.24■■□□□ 1.63
EXTL3-205ENST00000519288 TFCP2L1Q9NZI6 479 aa25.24■■□□□ 1.63
EXTL3-205ENST00000519288 KAT6BQ8WYB5 2073 aa25.24■■□□□ 1.63
EXTL3-205ENST00000519288 SLC16A10Q8TF71 515 aa25.23■■□□□ 1.63
EXTL3-205ENST00000519288 GGNBP2Q9H3C7 697 aa25.23■■□□□ 1.63
EXTL3-205ENST00000519288 TUBGCP6Q96RT7 1819 aa25.23■■□□□ 1.63
EXTL3-205ENST00000519288 QSER1Q2KHR3 1735 aa25.23■■□□□ 1.63
EXTL3-205ENST00000519288 RTL1A6NKG5 1358 aa25.22■■□□□ 1.63
EXTL3-205ENST00000519288 NBPF6Q5VWK0 638 aa25.22■■□□□ 1.63
EXTL3-205ENST00000519288 NBPF4Q96M43 638 aa25.22■■□□□ 1.63
EXTL3-205ENST00000519288 LY75O60449 1722 aa25.2■■□□□ 1.63
EXTL3-205ENST00000519288 UTRNP46939 3433 aa25.2■■□□□ 1.63
EXTL3-205ENST00000519288 FYB1O15117 783 aa25.2■■□□□ 1.62
EXTL3-205ENST00000519288 POLD1P28340 1107 aa25.2■■□□□ 1.62
EXTL3-205ENST00000519288 GPR162Q16538 588 aa25.2■■□□□ 1.62
EXTL3-205ENST00000519288 CCNL1Q9UK58 526 aaPredicted RBP25.19■■□□□ 1.62
EXTL3-205ENST00000519288 COL24A1Q17RW2 1714 aa25.18■■□□□ 1.62
EXTL3-205ENST00000519288 NLGN2Q8NFZ4 835 aa25.17■■□□□ 1.62
EXTL3-205ENST00000519288 PELP1Q8IZL8 1130 aaKnown RBP25.16■■□□□ 1.62
EXTL3-205ENST00000519288 SLC24A1O60721 1099 aa25.15■■□□□ 1.62
EXTL3-205ENST00000519288 TMF1P82094 1093 aa25.15■■□□□ 1.62
EXTL3-205ENST00000519288 USP47Q96K76 1375 aa25.15■■□□□ 1.62
EXTL3-205ENST00000519288 SMG6Q86US8 1419 aaKnown RBP25.14■■□□□ 1.62
EXTL3-205ENST00000519288 HSP90AB2PQ58FF8 381 aa25.14■■□□□ 1.62
EXTL3-205ENST00000519288 RAPGEF4Q8WZA2 1011 aa25.14■■□□□ 1.62
EXTL3-205ENST00000519288 CHD4Q14839 1912 aa25.14■■□□□ 1.61
EXTL3-205ENST00000519288 MSH5O43196 834 aa25.13■■□□□ 1.61
EXTL3-205ENST00000519288 COL23A1Q86Y22 540 aaPredicted RBP25.13■■□□□ 1.61
EXTL3-205ENST00000519288 TATP17735 454 aaPredicted RBP25.12■■□□□ 1.61
EXTL3-205ENST00000519288 CGNL1Q0VF96 1302 aa25.12■■□□□ 1.61
EXTL3-205ENST00000519288 INSRP06213 1382 aa25.1■■□□□ 1.61
EXTL3-205ENST00000519288 MSL1Q68DK7 614 aa25.1■■□□□ 1.61
EXTL3-205ENST00000519288 FLT4P35916 1363 aa25.08■■□□□ 1.61
EXTL3-205ENST00000519288 KIF20BQ96Q89 1820 aa25.08■■□□□ 1.61
EXTL3-205ENST00000519288 PCDH11XQ9BZA7 1347 aa25.08■■□□□ 1.6
EXTL3-205ENST00000519288 PCDH11YQ9BZA8 1340 aa25.08■■□□□ 1.6
EXTL3-205ENST00000519288 C1QTNF8P60827 252 aa25.07■■□□□ 1.6
EXTL3-205ENST00000519288 SENP3-EIF4A1A0A087X0R7 540 aa25.06■■□□□ 1.6
EXTL3-205ENST00000519288 EMILIN1Q9Y6C2 1016 aa25.06■■□□□ 1.6
EXTL3-205ENST00000519288 PALLDQ8WX93 1383 aa25.05■■□□□ 1.6
EXTL3-205ENST00000519288 C5P01031 1676 aa25.05■■□□□ 1.6
EXTL3-205ENST00000519288 CYP27B1O15528 508 aa25.05■■□□□ 1.6
EXTL3-205ENST00000519288 YBX3P16989 372 aaKnown RBP eCLIP25.05■■□□□ 1.6
EXTL3-205ENST00000519288 MPRIPQ6WCQ1 1025 aa25.05■■□□□ 1.6
EXTL3-205ENST00000519288 CARD14Q9BXL6 1004 aa25.05■■□□□ 1.6
EXTL3-205ENST00000519288 TOGARAM1Q9Y4F4 1720 aa25.03■■□□□ 1.6
EXTL3-205ENST00000519288 NSD3Q9BZ95 1437 aa25.03■■□□□ 1.6
EXTL3-205ENST00000519288 KIF24Q5T7B8 1368 aa25.02■■□□□ 1.6
EXTL3-205ENST00000519288 CDCA8Q53HL2 280 aa25■■□□□ 1.59
EXTL3-205ENST00000519288 AMIGO3Q86WK7 504 aa24.99■■□□□ 1.59
EXTL3-205ENST00000519288 PPM1GO15355 546 aaPredicted RBP24.98■■□□□ 1.59
EXTL3-205ENST00000519288 GIGYF1O75420 1035 aaPredicted RBP24.98■■□□□ 1.59
EXTL3-205ENST00000519288 SMIM5Q71RC9 77 aa24.98■■□□□ 1.59
EXTL3-205ENST00000519288 PKD1L3Q7Z443 1732 aa24.98■■□□□ 1.59
EXTL3-205ENST00000519288 NCAPD2Q15021 1401 aa24.97■■□□□ 1.59
EXTL3-205ENST00000519288 TAF1LQ8IZX4 1826 aa24.97■■□□□ 1.59
EXTL3-205ENST00000519288 C4BP0C0L5 1744 aa24.97■■□□□ 1.59
EXTL3-205ENST00000519288 GRIN3BO60391 1043 aa24.96■■□□□ 1.59
EXTL3-205ENST00000519288 PIGBQ92521 554 aa24.96■■□□□ 1.59
EXTL3-205ENST00000519288 FLAD1Q8NFF5 587 aa24.95■■□□□ 1.58
EXTL3-205ENST00000519288 SMARCC1Q92922 1105 aaPredicted RBP24.95■■□□□ 1.58
EXTL3-205ENST00000519288 AK7Q96M32 723 aa24.95■■□□□ 1.58
EXTL3-205ENST00000519288 ITGB4P16144 1822 aa24.94■■□□□ 1.58
EXTL3-205ENST00000519288 PHF14O94880 888 aa24.94■■□□□ 1.58
EXTL3-205ENST00000519288 NKX1-1Q15270 411 aaPredicted RBP24.93■■□□□ 1.58
EXTL3-205ENST00000519288 CD2APQ9Y5K6 639 aa24.93■■□□□ 1.58
EXTL3-205ENST00000519288 EYA1Q99502 592 aa24.92■■□□□ 1.58
EXTL3-205ENST00000519288 GOLGB1Q14789 3259 aaKnown RBP24.92■■□□□ 1.58
EXTL3-205ENST00000519288 ANKRD26Q9UPS8 1709 aa24.92■■□□□ 1.58
EXTL3-205ENST00000519288 SPG7Q9UQ90 795 aa24.91■■□□□ 1.58
EXTL3-205ENST00000519288 WASHC2AQ641Q2 1341 aa24.9■■□□□ 1.58
EXTL3-205ENST00000519288 LINC00116Q8NCU8 138 aa24.9■■□□□ 1.58
EXTL3-205ENST00000519288 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.89■■□□□ 1.58
EXTL3-205ENST00000519288 ATP10DQ9P241 1426 aa24.88■■□□□ 1.57
EXTL3-205ENST00000519288 LOC102724428A0A0B4J2F2 783 aa24.88■■□□□ 1.57
EXTL3-205ENST00000519288 HMGB2P26583 209 aaKnown RBP24.88■■□□□ 1.57
EXTL3-205ENST00000519288 SIK1P57059 783 aa24.88■■□□□ 1.57
EXTL3-205ENST00000519288 TRIM26Q12899 539 aaPredicted RBP24.88■■□□□ 1.57
EXTL3-205ENST00000519288 WWC3Q9ULE0 1092 aa24.88■■□□□ 1.57
EXTL3-205ENST00000519288 UBR3Q6ZT12 1888 aa24.87■■□□□ 1.57
EXTL3-205ENST00000519288 MAP2P11137 1827 aaKnown RBP24.87■■□□□ 1.57
EXTL3-205ENST00000519288 POLKQ9UBT6 870 aa24.87■■□□□ 1.57
EXTL3-205ENST00000519288 ASAP1Q9ULH1 1129 aa24.87■■□□□ 1.57
EXTL3-205ENST00000519288 ITPK1Q13572 414 aa24.86■■□□□ 1.57
EXTL3-205ENST00000519288 TMOD3Q9NYL9 352 aa24.86■■□□□ 1.57
EXTL3-205ENST00000519288 PHKG2P15735 406 aa24.85■■□□□ 1.57
EXTL3-205ENST00000519288 POLR3GLQ9BT43 218 aa24.85■■□□□ 1.57
EXTL3-205ENST00000519288 SSFA2P28290 1259 aa24.84■■□□□ 1.57
EXTL3-205ENST00000519288 TNNT2P45379 298 aaPredicted RBP24.84■■□□□ 1.57
EXTL3-205ENST00000519288 IGSF1Q8N6C5 1336 aa24.84■■□□□ 1.57
EXTL3-205ENST00000519288 EIF4A2Q14240 407 aaKnown RBP24.83■■□□□ 1.57
EXTL3-205ENST00000519288 IFNL2Q8IZJ0 200 aa24.83■■□□□ 1.57
EXTL3-205ENST00000519288 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.83■■□□□ 1.57
EXTL3-205ENST00000519288 GNPATO15228 680 aa24.82■■□□□ 1.56
EXTL3-205ENST00000519288 ATP6V1AP38606 617 aa24.82■■□□□ 1.56
EXTL3-205ENST00000519288 ATG3Q9NT62 314 aa24.81■■□□□ 1.56
EXTL3-205ENST00000519288 ADCY9O60503 1353 aa24.8■■□□□ 1.56
EXTL3-205ENST00000519288 ZNF526Q8TF50 670 aaPredicted RBP24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms