RNA–Protein interactions for RNA: ENST00000519221.5

MCPH1-202, Transcript of microcephalin 1, humanhuman

TSL 3

Gene MCPH1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-202ENST00000519221 DDX54Q8TDD1 881 aaKnown RBP17.47■□□□□ 0.39
MCPH1-202ENST00000519221 POLKQ9UBT6 870 aa17.47■□□□□ 0.39
MCPH1-202ENST00000519221 NCAPD2Q15021 1401 aa17.47■□□□□ 0.39
MCPH1-202ENST00000519221 KIF7Q2M1P5 1343 aa17.47■□□□□ 0.39
MCPH1-202ENST00000519221 PPM1GO15355 546 aaPredicted RBP17.46■□□□□ 0.39
MCPH1-202ENST00000519221 KCNQ2O43526 872 aa17.46■□□□□ 0.39
MCPH1-202ENST00000519221 TATP17735 454 aaPredicted RBP17.46■□□□□ 0.39
MCPH1-202ENST00000519221 KNSTRNQ9Y448 316 aa17.46■□□□□ 0.39
MCPH1-202ENST00000519221 ACSBG1Q96GR2 724 aa17.45■□□□□ 0.38
MCPH1-202ENST00000519221 PKD1L3Q7Z443 1732 aa17.44■□□□□ 0.38
MCPH1-202ENST00000519221 DOT1LQ8TEK3 1739 aa17.44■□□□□ 0.38
MCPH1-202ENST00000519221 TXNRD1Q16881 649 aa17.44■□□□□ 0.38
MCPH1-202ENST00000519221 PROM2Q8N271 834 aa17.44■□□□□ 0.38
MCPH1-202ENST00000519221 USHBP1Q8N6Y0 703 aa17.44■□□□□ 0.38
MCPH1-202ENST00000519221 PCDH11XQ9BZA7 1347 aa17.42■□□□□ 0.38
MCPH1-202ENST00000519221 PCDH11YQ9BZA8 1340 aa17.42■□□□□ 0.38
MCPH1-202ENST00000519221 PLEKHG2Q9H7P9 1386 aa17.41■□□□□ 0.38
MCPH1-202ENST00000519221 TNNT2P45379 298 aaPredicted RBP17.41■□□□□ 0.38
MCPH1-202ENST00000519221 MORC1Q86VD1 984 aa17.41■□□□□ 0.38
MCPH1-202ENST00000519221 EYA1Q99502 592 aa17.4■□□□□ 0.38
MCPH1-202ENST00000519221 AMER1Q5JTC6 1135 aaPredicted RBP17.39■□□□□ 0.37
MCPH1-202ENST00000519221 ANO8Q9HCE9 1232 aaPredicted RBP17.39■□□□□ 0.37
MCPH1-202ENST00000519221 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.39■□□□□ 0.37
MCPH1-202ENST00000519221 LY75O60449 1722 aa17.38■□□□□ 0.37
MCPH1-202ENST00000519221 CASZ1Q86V15 1759 aa17.38■□□□□ 0.37
MCPH1-202ENST00000519221 PRIM1P49642 420 aaKnown RBP17.38■□□□□ 0.37
MCPH1-202ENST00000519221 EIF4A2Q14240 407 aaKnown RBP17.38■□□□□ 0.37
MCPH1-202ENST00000519221 STK32BQ9NY57 414 aa17.38■□□□□ 0.37
MCPH1-202ENST00000519221 ITGB4P16144 1822 aa17.37■□□□□ 0.37
MCPH1-202ENST00000519221 PAPPAQ13219 1627 aa17.37■□□□□ 0.37
MCPH1-202ENST00000519221 SLC27A3Q5K4L6 730 aa17.37■□□□□ 0.37
MCPH1-202ENST00000519221 SPG7Q9UQ90 795 aa17.37■□□□□ 0.37
MCPH1-202ENST00000519221 PER1O15534 1290 aaPredicted RBP17.36■□□□□ 0.37
MCPH1-202ENST00000519221 SYTL4Q96C24 671 aaPredicted RBP17.36■□□□□ 0.37
MCPH1-202ENST00000519221 CYP27B1O15528 508 aa17.35■□□□□ 0.37
MCPH1-202ENST00000519221 SLC15A2Q16348 729 aa17.35■□□□□ 0.37
MCPH1-202ENST00000519221 IGSF1Q8N6C5 1336 aa17.35■□□□□ 0.37
MCPH1-202ENST00000519221 NPC1L1Q9UHC9 1359 aa17.35■□□□□ 0.37
MCPH1-202ENST00000519221 QSER1Q2KHR3 1735 aa17.34■□□□□ 0.37
MCPH1-202ENST00000519221 SPON1Q9HCB6 807 aa17.34■□□□□ 0.37
MCPH1-202ENST00000519221 NKX1-1Q15270 411 aaPredicted RBP17.33■□□□□ 0.36
MCPH1-202ENST00000519221 TOGARAM1Q9Y4F4 1720 aa17.33■□□□□ 0.36
MCPH1-202ENST00000519221 HMGB2P26583 209 aaKnown RBP17.32■□□□□ 0.36
MCPH1-202ENST00000519221 LRRC4BQ9NT99 713 aa17.32■□□□□ 0.36
MCPH1-202ENST00000519221 IFNL2Q8IZJ0 200 aa17.3■□□□□ 0.36
MCPH1-202ENST00000519221 TAF1LQ8IZX4 1826 aa17.28■□□□□ 0.36
MCPH1-202ENST00000519221 PHKG2P15735 406 aa17.28■□□□□ 0.36
MCPH1-202ENST00000519221 SMARCC1Q92922 1105 aaPredicted RBP17.28■□□□□ 0.36
MCPH1-202ENST00000519221 AKT1S1Q96B36 256 aa17.28■□□□□ 0.36
MCPH1-202ENST00000519221 TUBGCP6Q96RT7 1819 aa17.28■□□□□ 0.36
MCPH1-202ENST00000519221 KDRP35968 1356 aa17.28■□□□□ 0.36
MCPH1-202ENST00000519221 MTHFSP49914 203 aa17.27■□□□□ 0.36
MCPH1-202ENST00000519221 AMOTQ4VCS5 1084 aa17.27■□□□□ 0.36
MCPH1-202ENST00000519221 PLEKHO1Q53GL0 409 aaPredicted RBP17.27■□□□□ 0.36
MCPH1-202ENST00000519221 MPRIPQ6WCQ1 1025 aa17.27■□□□□ 0.36
MCPH1-202ENST00000519221 CCNL1Q9UK58 526 aaPredicted RBP17.27■□□□□ 0.36
MCPH1-202ENST00000519221 IL13P35225 146 aa17.26■□□□□ 0.35
MCPH1-202ENST00000519221 ZNF827Q17R98 1081 aa17.26■□□□□ 0.35
MCPH1-202ENST00000519221 CC2D1BQ5T0F9 858 aaKnown RBP17.26■□□□□ 0.35
MCPH1-202ENST00000519221 MTFR1LQ9H019 292 aa17.26■□□□□ 0.35
MCPH1-202ENST00000519221 C5P01031 1676 aa17.26■□□□□ 0.35
MCPH1-202ENST00000519221 HSP90AB1P08238 724 aaKnown RBP17.25■□□□□ 0.35
MCPH1-202ENST00000519221 PDGFDQ9GZP0 370 aaPredicted RBP17.25■□□□□ 0.35
MCPH1-202ENST00000519221 PPP1R1BQ9UD71 204 aaPredicted RBP17.25■□□□□ 0.35
MCPH1-202ENST00000519221 PALLDQ8WX93 1383 aa17.25■□□□□ 0.35
MCPH1-202ENST00000519221 SLC16A10Q8TF71 515 aa17.24■□□□□ 0.35
MCPH1-202ENST00000519221 PIGBQ92521 554 aa17.24■□□□□ 0.35
MCPH1-202ENST00000519221 ZBTB7AO95365 584 aa17.23■□□□□ 0.35
MCPH1-202ENST00000519221 SULT6B1Q6IMI4 303 aa17.23■□□□□ 0.35
MCPH1-202ENST00000519221 DCAF5Q96JK2 942 aa17.23■□□□□ 0.35
MCPH1-202ENST00000519221 TMOD3Q9NYL9 352 aa17.23■□□□□ 0.35
MCPH1-202ENST00000519221 COL24A1Q17RW2 1714 aa17.22■□□□□ 0.35
MCPH1-202ENST00000519221 ERVV-2B6SEH9 535 aa17.22■□□□□ 0.35
MCPH1-202ENST00000519221 PTGER2P43116 358 aa17.22■□□□□ 0.35
MCPH1-202ENST00000519221 AEBP1Q8IUX7 1158 aa17.22■□□□□ 0.35
MCPH1-202ENST00000519221 TFCP2L1Q9NZI6 479 aa17.22■□□□□ 0.35
MCPH1-202ENST00000519221 KCNQ4P56696 695 aa17.21■□□□□ 0.35
MCPH1-202ENST00000519221 ZNF530Q6P9A1 599 aaPredicted RBP17.21■□□□□ 0.35
MCPH1-202ENST00000519221 PNPLA7Q6ZV29 1317 aa17.21■□□□□ 0.34
MCPH1-202ENST00000519221 SCN11AQ9UI33 1791 aa17.2■□□□□ 0.34
MCPH1-202ENST00000519221 DIAPH1O60610 1272 aaKnown RBP17.2■□□□□ 0.34
MCPH1-202ENST00000519221 C1orf141Q5JVX7 400 aa17.2■□□□□ 0.34
MCPH1-202ENST00000519221 ATF5Q9Y2D1 282 aaPredicted RBP17.2■□□□□ 0.34
MCPH1-202ENST00000519221 VIRMAQ69YN4 1812 aaKnown RBP17.19■□□□□ 0.34
MCPH1-202ENST00000519221 SGIP1Q9BQI5 828 aa17.19■□□□□ 0.34
MCPH1-202ENST00000519221 ZNF831Q5JPB2 1677 aa17.19■□□□□ 0.34
MCPH1-202ENST00000519221 C4BP0C0L5 1744 aa17.18■□□□□ 0.34
MCPH1-202ENST00000519221 COL3A1P02461 1466 aaPredicted RBP17.18■□□□□ 0.34
MCPH1-202ENST00000519221 FLAD1Q8NFF5 587 aa17.18■□□□□ 0.34
MCPH1-202ENST00000519221 UBR3Q6ZT12 1888 aa17.18■□□□□ 0.34
MCPH1-202ENST00000519221 LOC102724428A0A0B4J2F2 783 aa17.17■□□□□ 0.34
MCPH1-202ENST00000519221 KDM6AO15550 1401 aaPredicted RBP17.17■□□□□ 0.34
MCPH1-202ENST00000519221 SIK1P57059 783 aa17.17■□□□□ 0.34
MCPH1-202ENST00000519221 ATG3Q9NT62 314 aa17.16■□□□□ 0.34
MCPH1-202ENST00000519221 ASAP1Q9ULH1 1129 aa17.16■□□□□ 0.34
MCPH1-202ENST00000519221 AKAP4Q5JQC9 854 aa17.15■□□□□ 0.34
MCPH1-202ENST00000519221 HMOX1P09601 288 aa17.14■□□□□ 0.33
MCPH1-202ENST00000519221 POLD1P28340 1107 aa17.14■□□□□ 0.33
MCPH1-202ENST00000519221 CABP4P57796 275 aa17.14■□□□□ 0.33
MCPH1-202ENST00000519221 CFAP53Q96M91 514 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms