RNA–Protein interactions for RNA: ENST00000519138.1

MCM4-206, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 2

Gene MCM4, Length 927 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-206ENST00000519138 RTL1A6NKG5 1358 aa17.4■□□□□ 0.38
MCM4-206ENST00000519138 CASZ1Q86V15 1759 aa17.39■□□□□ 0.37
MCM4-206ENST00000519138 FLT4P35916 1363 aa17.37■□□□□ 0.37
MCM4-206ENST00000519138 KCNQ4P56696 695 aa17.36■□□□□ 0.37
MCM4-206ENST00000519138 ZCRB1Q8TBF4 217 aaKnown RBP17.36■□□□□ 0.37
MCM4-206ENST00000519138 SYTL4Q96C24 671 aaPredicted RBP17.36■□□□□ 0.37
MCM4-206ENST00000519138 PANK3Q9H999 370 aa17.36■□□□□ 0.37
MCM4-206ENST00000519138 INSRP06213 1382 aa17.36■□□□□ 0.37
MCM4-206ENST00000519138 SMG6Q86US8 1419 aaKnown RBP17.35■□□□□ 0.37
MCM4-206ENST00000519138 PRIM1P49642 420 aaKnown RBP17.34■□□□□ 0.37
MCM4-206ENST00000519138 CGNL1Q0VF96 1302 aa17.34■□□□□ 0.37
MCM4-206ENST00000519138 TUBGCP6Q96RT7 1819 aa17.33■□□□□ 0.37
MCM4-206ENST00000519138 PAPPAQ13219 1627 aa17.33■□□□□ 0.37
MCM4-206ENST00000519138 ZBTB7AO95365 584 aa17.33■□□□□ 0.36
MCM4-206ENST00000519138 LRRC4BQ9NT99 713 aa17.33■□□□□ 0.36
MCM4-206ENST00000519138 TOGARAM1Q9Y4F4 1720 aa17.33■□□□□ 0.36
MCM4-206ENST00000519138 NSD2O96028 1365 aa17.32■□□□□ 0.36
MCM4-206ENST00000519138 POLKQ9UBT6 870 aa17.32■□□□□ 0.36
MCM4-206ENST00000519138 ITGB4P16144 1822 aa17.31■□□□□ 0.36
MCM4-206ENST00000519138 TATP17735 454 aaPredicted RBP17.31■□□□□ 0.36
MCM4-206ENST00000519138 ZNF827Q17R98 1081 aa17.31■□□□□ 0.36
MCM4-206ENST00000519138 RAPGEF4Q8WZA2 1011 aa17.31■□□□□ 0.36
MCM4-206ENST00000519138 STK32BQ9NY57 414 aa17.31■□□□□ 0.36
MCM4-206ENST00000519138 LY75O60449 1722 aa17.3■□□□□ 0.36
MCM4-206ENST00000519138 SLC15A2Q16348 729 aa17.3■□□□□ 0.36
MCM4-206ENST00000519138 ATF5Q9Y2D1 282 aaPredicted RBP17.3■□□□□ 0.36
MCM4-206ENST00000519138 PKD1L3Q7Z443 1732 aa17.3■□□□□ 0.36
MCM4-206ENST00000519138 SPON1Q9HCB6 807 aa17.29■□□□□ 0.36
MCM4-206ENST00000519138 EYA1Q99502 592 aa17.28■□□□□ 0.36
MCM4-206ENST00000519138 KIF24Q5T7B8 1368 aa17.28■□□□□ 0.36
MCM4-206ENST00000519138 WASHC2AQ641Q2 1341 aa17.27■□□□□ 0.36
MCM4-206ENST00000519138 CYP27B1O15528 508 aa17.27■□□□□ 0.36
MCM4-206ENST00000519138 KIF7Q2M1P5 1343 aa17.26■□□□□ 0.35
MCM4-206ENST00000519138 EIF4A2Q14240 407 aaKnown RBP17.26■□□□□ 0.35
MCM4-206ENST00000519138 PPP1R1BQ9UD71 204 aaPredicted RBP17.26■□□□□ 0.35
MCM4-206ENST00000519138 NCAPD2Q15021 1401 aa17.24■□□□□ 0.35
MCM4-206ENST00000519138 CNGB1Q14028 1251 aaPredicted RBP17.24■□□□□ 0.35
MCM4-206ENST00000519138 PCDH11XQ9BZA7 1347 aa17.23■□□□□ 0.35
MCM4-206ENST00000519138 PCDH11YQ9BZA8 1340 aa17.23■□□□□ 0.35
MCM4-206ENST00000519138 PTGER2P43116 358 aa17.23■□□□□ 0.35
MCM4-206ENST00000519138 MORC1Q86VD1 984 aa17.23■□□□□ 0.35
MCM4-206ENST00000519138 TAF1LQ8IZX4 1826 aa17.22■□□□□ 0.35
MCM4-206ENST00000519138 MPRIPQ6WCQ1 1025 aa17.22■□□□□ 0.35
MCM4-206ENST00000519138 AKT1S1Q96B36 256 aa17.22■□□□□ 0.35
MCM4-206ENST00000519138 QSER1Q2KHR3 1735 aa17.21■□□□□ 0.35
MCM4-206ENST00000519138 C5P01031 1676 aa17.21■□□□□ 0.35
MCM4-206ENST00000519138 CCNL1Q9UK58 526 aaPredicted RBP17.2■□□□□ 0.34
MCM4-206ENST00000519138 KNSTRNQ9Y448 316 aa17.2■□□□□ 0.34
MCM4-206ENST00000519138 PNPLA7Q6ZV29 1317 aa17.19■□□□□ 0.34
MCM4-206ENST00000519138 AMER1Q5JTC6 1135 aaPredicted RBP17.18■□□□□ 0.34
MCM4-206ENST00000519138 SLC27A3Q5K4L6 730 aa17.18■□□□□ 0.34
MCM4-206ENST00000519138 SMIM5Q71RC9 77 aa17.18■□□□□ 0.34
MCM4-206ENST00000519138 AEBP1Q8IUX7 1158 aa17.18■□□□□ 0.34
MCM4-206ENST00000519138 CC2D1BQ5T0F9 858 aaKnown RBP17.17■□□□□ 0.34
MCM4-206ENST00000519138 PIGBQ92521 554 aa17.17■□□□□ 0.34
MCM4-206ENST00000519138 MTFR1LQ9H019 292 aa17.17■□□□□ 0.34
MCM4-206ENST00000519138 TFCP2L1Q9NZI6 479 aa17.17■□□□□ 0.34
MCM4-206ENST00000519138 SPG7Q9UQ90 795 aa17.17■□□□□ 0.34
MCM4-206ENST00000519138 PALLDQ8WX93 1383 aa17.16■□□□□ 0.34
MCM4-206ENST00000519138 SGIP1Q9BQI5 828 aa17.16■□□□□ 0.34
MCM4-206ENST00000519138 IGSF1Q8N6C5 1336 aa17.16■□□□□ 0.34
MCM4-206ENST00000519138 PHKG2P15735 406 aa17.15■□□□□ 0.34
MCM4-206ENST00000519138 FHDC1Q9C0D6 1143 aaPredicted RBP17.14■□□□□ 0.33
MCM4-206ENST00000519138 VIRMAQ69YN4 1812 aaKnown RBP17.13■□□□□ 0.33
MCM4-206ENST00000519138 PER1O15534 1290 aaPredicted RBP17.13■□□□□ 0.33
MCM4-206ENST00000519138 MSH5O43196 834 aa17.13■□□□□ 0.33
MCM4-206ENST00000519138 NKX1-1Q15270 411 aaPredicted RBP17.13■□□□□ 0.33
MCM4-206ENST00000519138 AMIGO3Q86WK7 504 aa17.13■□□□□ 0.33
MCM4-206ENST00000519138 ASAP1Q9ULH1 1129 aa17.13■□□□□ 0.33
MCM4-206ENST00000519138 C4BP0C0L5 1744 aa17.13■□□□□ 0.33
MCM4-206ENST00000519138 COL24A1Q17RW2 1714 aa17.13■□□□□ 0.33
MCM4-206ENST00000519138 MSL1Q68DK7 614 aa17.12■□□□□ 0.33
MCM4-206ENST00000519138 COL23A1Q86Y22 540 aaPredicted RBP17.12■□□□□ 0.33
MCM4-206ENST00000519138 IFNL2Q8IZJ0 200 aa17.12■□□□□ 0.33
MCM4-206ENST00000519138 KLHL34Q8N239 644 aa17.12■□□□□ 0.33
MCM4-206ENST00000519138 UBR3Q6ZT12 1888 aa17.12■□□□□ 0.33
MCM4-206ENST00000519138 SULT6B1Q6IMI4 303 aa17.11■□□□□ 0.33
MCM4-206ENST00000519138 IL13P35225 146 aa17.1■□□□□ 0.33
MCM4-206ENST00000519138 MTHFSP49914 203 aa17.1■□□□□ 0.33
MCM4-206ENST00000519138 ZNF530Q6P9A1 599 aaPredicted RBP17.1■□□□□ 0.33
MCM4-206ENST00000519138 ARXQ96QS3 562 aa17.1■□□□□ 0.33
MCM4-206ENST00000519138 SYT17Q9BSW7 474 aa17.1■□□□□ 0.33
MCM4-206ENST00000519138 TMOD3Q9NYL9 352 aa17.1■□□□□ 0.33
MCM4-206ENST00000519138 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.09■□□□□ 0.332e-6■■■■□ 22.6
MCM4-206ENST00000519138 KDM6AO15550 1401 aaPredicted RBP17.09■□□□□ 0.33
MCM4-206ENST00000519138 UTRNP46939 3433 aa17.08■□□□□ 0.33
MCM4-206ENST00000519138 PHF14O94880 888 aa17.08■□□□□ 0.32
MCM4-206ENST00000519138 HMOX1P09601 288 aa17.08■□□□□ 0.32
MCM4-206ENST00000519138 LINC00116Q8NCU8 138 aa17.08■□□□□ 0.32
MCM4-206ENST00000519138 ATG3Q9NT62 314 aa17.08■□□□□ 0.32
MCM4-206ENST00000519138 ITPK1Q13572 414 aa17.07■□□□□ 0.32
MCM4-206ENST00000519138 PLEKHO1Q53GL0 409 aaPredicted RBP17.07■□□□□ 0.32
MCM4-206ENST00000519138 SCN11AQ9UI33 1791 aa17.07■□□□□ 0.32
MCM4-206ENST00000519138 LOC102724428A0A0B4J2F2 783 aa17.06■□□□□ 0.32
MCM4-206ENST00000519138 ADRA2BP18089 450 aa17.06■□□□□ 0.32
MCM4-206ENST00000519138 SIK1P57059 783 aa17.06■□□□□ 0.32
MCM4-206ENST00000519138 SMARCC1Q92922 1105 aaPredicted RBP17.06■□□□□ 0.32
MCM4-206ENST00000519138 NLGN2Q8NFZ4 835 aa17.04■□□□□ 0.32
MCM4-206ENST00000519138 SLC16A10Q8TF71 515 aa17.04■□□□□ 0.32
MCM4-206ENST00000519138 AK7Q96M32 723 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms