RNA–Protein interactions for RNA: ENST00000518910.5

CTNNA1-211, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-211ENST00000518910 DIAPH1O60610 1272 aaKnown RBP16.5■□□□□ 0.23
CTNNA1-211ENST00000518910 SULT6B1Q6IMI4 303 aa16.5■□□□□ 0.23
CTNNA1-211ENST00000518910 MARCH10Q8NA82 808 aaPredicted RBP16.5■□□□□ 0.23
CTNNA1-211ENST00000518910 PKD1L3Q7Z443 1732 aa16.5■□□□□ 0.23
CTNNA1-211ENST00000518910 IL13P35225 146 aa16.49■□□□□ 0.23
CTNNA1-211ENST00000518910 CFAP53Q96M91 514 aa16.49■□□□□ 0.23
CTNNA1-211ENST00000518910 CDCA7Q9BWT1 371 aaPredicted RBP16.49■□□□□ 0.23
CTNNA1-211ENST00000518910 OVOS2A0A0G2JMS6 1433 aa16.48■□□□□ 0.23
CTNNA1-211ENST00000518910 ZCRB1Q8TBF4 217 aaKnown RBP16.48■□□□□ 0.23
CTNNA1-211ENST00000518910 ITGB4P16144 1822 aa16.47■□□□□ 0.23
CTNNA1-211ENST00000518910 PTF1AQ7RTS3 328 aa16.47■□□□□ 0.23
CTNNA1-211ENST00000518910 BTAF1O14981 1849 aa16.47■□□□□ 0.23
CTNNA1-211ENST00000518910 IGSF1Q8N6C5 1336 aa16.46■□□□□ 0.23
CTNNA1-211ENST00000518910 SF3B2Q13435 895 aaKnown RBP16.46■□□□□ 0.23
CTNNA1-211ENST00000518910 DEFB132Q7Z7B7 95 aa16.46■□□□□ 0.23
CTNNA1-211ENST00000518910 SYTL4Q96C24 671 aaPredicted RBP16.46■□□□□ 0.23
CTNNA1-211ENST00000518910 TOGARAM1Q9Y4F4 1720 aa16.45■□□□□ 0.22
CTNNA1-211ENST00000518910 FAM196AQ6ZSG2 479 aa16.45■□□□□ 0.22
CTNNA1-211ENST00000518910 NHSQ6T4R5 1651 aa16.44■□□□□ 0.22
CTNNA1-211ENST00000518910 U2AF1L5P0DN76 240 aaPredicted RBP16.44■□□□□ 0.22
CTNNA1-211ENST00000518910 U2AF1Q01081 240 aaKnown RBP eCLIP16.44■□□□□ 0.22
CTNNA1-211ENST00000518910 RALBP1Q15311 655 aa16.44■□□□□ 0.22
CTNNA1-211ENST00000518910 MYBBP1AQ9BQG0 1328 aaKnown RBP16.44■□□□□ 0.22
CTNNA1-211ENST00000518910 KCNQ2O43526 872 aa16.43■□□□□ 0.22
CTNNA1-211ENST00000518910 NCAPD2Q15021 1401 aa16.43■□□□□ 0.22
CTNNA1-211ENST00000518910 PRKRIP1Q9H875 184 aaPredicted RBP16.42■□□□□ 0.22
CTNNA1-211ENST00000518910 DLG5Q8TDM6 1919 aa16.41■□□□□ 0.22
CTNNA1-211ENST00000518910 APBA3O96018 575 aa16.41■□□□□ 0.22
CTNNA1-211ENST00000518910 EN1Q05925 392 aaPredicted RBP16.41■□□□□ 0.22
CTNNA1-211ENST00000518910 ZNF530Q6P9A1 599 aaPredicted RBP16.41■□□□□ 0.22
CTNNA1-211ENST00000518910 SPG7Q9UQ90 795 aa16.41■□□□□ 0.22
CTNNA1-211ENST00000518910 PCDH11XQ9BZA7 1347 aa16.41■□□□□ 0.22
CTNNA1-211ENST00000518910 PCDH11YQ9BZA8 1340 aa16.41■□□□□ 0.22
CTNNA1-211ENST00000518910 CYP27B1O15528 508 aa16.4■□□□□ 0.22
CTNNA1-211ENST00000518910 ANP32CO43423 234 aa16.4■□□□□ 0.22
CTNNA1-211ENST00000518910 NUDCQ9Y266 331 aa16.4■□□□□ 0.22
CTNNA1-211ENST00000518910 SENP3-EIF4A1A0A087X0R7 540 aa16.39■□□□□ 0.21
CTNNA1-211ENST00000518910 PRKAR2BP31323 418 aa16.39■□□□□ 0.21
CTNNA1-211ENST00000518910 PRIM1P49642 420 aaKnown RBP16.38■□□□□ 0.21
CTNNA1-211ENST00000518910 CCDC184Q52MB2 194 aa16.38■□□□□ 0.21
CTNNA1-211ENST00000518910 PLEKHO1Q53GL0 409 aaPredicted RBP16.38■□□□□ 0.21
CTNNA1-211ENST00000518910 SCN11AQ9UI33 1791 aa16.38■□□□□ 0.21
CTNNA1-211ENST00000518910 BAG6P46379 1132 aa16.37■□□□□ 0.21
CTNNA1-211ENST00000518910 EZH2Q15910 746 aaKnown RBP16.36■□□□□ 0.21
CTNNA1-211ENST00000518910 C1orf141Q5JVX7 400 aa16.36■□□□□ 0.21
CTNNA1-211ENST00000518910 PHKG2P15735 406 aa16.35■□□□□ 0.21
CTNNA1-211ENST00000518910 MPRIPQ6WCQ1 1025 aa16.35■□□□□ 0.21
CTNNA1-211ENST00000518910 CCDC146Q8IYE0 955 aa16.35■□□□□ 0.21
CTNNA1-211ENST00000518910 KDRP35968 1356 aa16.35■□□□□ 0.21
CTNNA1-211ENST00000518910 NUP188Q5SRE5 1749 aa16.34■□□□□ 0.21
CTNNA1-211ENST00000518910 MTHFSDQ2M296 383 aaKnown RBP16.34■□□□□ 0.21
CTNNA1-211ENST00000518910 IFNL2Q8IZJ0 200 aa16.34■□□□□ 0.21
CTNNA1-211ENST00000518910 RSPH6AQ9H0K4 717 aa16.34■□□□□ 0.21
CTNNA1-211ENST00000518910 KCNQ4P56696 695 aa16.33■□□□□ 0.2
CTNNA1-211ENST00000518910 WDR43Q15061 677 aaKnown RBP eCLIP16.33■□□□□ 0.2
CTNNA1-211ENST00000518910 PHACTR3Q96KR7 559 aa16.33■□□□□ 0.2
CTNNA1-211ENST00000518910 BCL11BQ9C0K0 894 aaPredicted RBP16.33■□□□□ 0.2
CTNNA1-211ENST00000518910 RREB1Q92766 1687 aa16.33■□□□□ 0.2
CTNNA1-211ENST00000518910 KDM6AO15550 1401 aaPredicted RBP16.31■□□□□ 0.2
CTNNA1-211ENST00000518910 AMOTQ4VCS5 1084 aa16.31■□□□□ 0.2
CTNNA1-211ENST00000518910 CCDC125Q86Z20 511 aa16.31■□□□□ 0.2
CTNNA1-211ENST00000518910 MRS2Q9HD23 443 aa16.31■□□□□ 0.2
CTNNA1-211ENST00000518910 LY75O60449 1722 aa16.29■□□□□ 0.2
CTNNA1-211ENST00000518910 LGR6Q9HBX8 967 aa16.29■□□□□ 0.2
CTNNA1-211ENST00000518910 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.29■□□□□ 0.27e-9■□□□□ 10.5
CTNNA1-211ENST00000518910 MAPK8IP3Q9UPT6 1336 aa16.28■□□□□ 0.2
CTNNA1-211ENST00000518910 PSDA5PKW4 1024 aaPredicted RBP16.28■□□□□ 0.2
CTNNA1-211ENST00000518910 NEFMP07197 916 aa16.28■□□□□ 0.2
CTNNA1-211ENST00000518910 TMOD3Q9NYL9 352 aa16.28■□□□□ 0.2
CTNNA1-211ENST00000518910 RRP7AQ9Y3A4 280 aaKnown RBP16.28■□□□□ 0.2
CTNNA1-211ENST00000518910 RGPD3A6NKT7 1758 aaPredicted RBP16.28■□□□□ 0.2
CTNNA1-211ENST00000518910 RGPD4Q7Z3J3 1758 aa16.28■□□□□ 0.2
CTNNA1-211ENST00000518910 CABP4P57796 275 aa16.27■□□□□ 0.2
CTNNA1-211ENST00000518910 DCTN1Q14203 1278 aa16.27■□□□□ 0.2
CTNNA1-211ENST00000518910 NEUROD2Q15784 382 aa16.27■□□□□ 0.2
CTNNA1-211ENST00000518910 AKAP4Q5JQC9 854 aa16.27■□□□□ 0.2
CTNNA1-211ENST00000518910 PIGBQ92521 554 aa16.27■□□□□ 0.2
CTNNA1-211ENST00000518910 BCL9O00512 1426 aa16.27■□□□□ 0.19
CTNNA1-211ENST00000518910 MAP3K5Q99683 1374 aa16.26■□□□□ 0.19
CTNNA1-211ENST00000518910 TAF1LQ8IZX4 1826 aa16.26■□□□□ 0.19
CTNNA1-211ENST00000518910 FCHSD2O94868 740 aa16.26■□□□□ 0.19
CTNNA1-211ENST00000518910 DIEXFQ68CQ4 756 aaKnown RBP16.26■□□□□ 0.19
CTNNA1-211ENST00000518910 CAMKK2Q96RR4 588 aa16.26■□□□□ 0.19
CTNNA1-211ENST00000518910 ADAMTS8Q9UP79 889 aa16.26■□□□□ 0.19
CTNNA1-211ENST00000518910 TUBGCP6Q96RT7 1819 aa16.26■□□□□ 0.19
CTNNA1-211ENST00000518910 SIPA1L3O60292 1781 aaPredicted RBP16.26■□□□□ 0.19
CTNNA1-211ENST00000518910 HSP90AB1P08238 724 aaKnown RBP16.25■□□□□ 0.19
CTNNA1-211ENST00000518910 TXNRD1Q16881 649 aa16.25■□□□□ 0.19
CTNNA1-211ENST00000518910 MCM10Q7L590 875 aa16.25■□□□□ 0.19
CTNNA1-211ENST00000518910 GAS2L2Q8NHY3 880 aa16.25■□□□□ 0.19
CTNNA1-211ENST00000518910 DCAF5Q96JK2 942 aa16.25■□□□□ 0.19
CTNNA1-211ENST00000518910 ASAP1Q9ULH1 1129 aa16.25■□□□□ 0.19
CTNNA1-211ENST00000518910 C5P01031 1676 aa16.24■□□□□ 0.19
CTNNA1-211ENST00000518910 GNAT3A8MTJ3 354 aa16.24■□□□□ 0.19
CTNNA1-211ENST00000518910 RNMTO43148 476 aaKnown RBP16.24■□□□□ 0.19
CTNNA1-211ENST00000518910 NKX1-1Q15270 411 aaPredicted RBP16.24■□□□□ 0.19
CTNNA1-211ENST00000518910 NFATC2IPQ8NCF5 419 aa16.24■□□□□ 0.19
CTNNA1-211ENST00000518910 THUMPD2Q9BTF0 503 aaKnown RBP16.24■□□□□ 0.19
CTNNA1-211ENST00000518910 PALLDQ8WX93 1383 aa16.24■□□□□ 0.19
CTNNA1-211ENST00000518910 FAM9BQ8IZU0 186 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms