RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 USHBP1Q8N6Y0 703 aa12.55□□□□□ -0.4
CLN8-203ENST00000518780 PLEKHF1Q96S99 279 aa12.55□□□□□ -0.4
CLN8-203ENST00000518780 USP35Q9P2H5 1018 aa12.55□□□□□ -0.4
CLN8-203ENST00000518780 EXOC5O00471 708 aa12.54□□□□□ -0.4
CLN8-203ENST00000518780 AEBP1Q8IUX7 1158 aa12.54□□□□□ -0.4
CLN8-203ENST00000518780 GAS2L2Q8NHY3 880 aa12.54□□□□□ -0.4
CLN8-203ENST00000518780 RGS17Q9UGC6 210 aaPredicted RBP12.54□□□□□ -0.4
CLN8-203ENST00000518780 MAPK8IP3Q9UPT6 1336 aa12.54□□□□□ -0.4
CLN8-203ENST00000518780 RGPD1P0DJD0 1748 aa12.54□□□□□ -0.4
CLN8-203ENST00000518780 DISP2A7MBM2 1401 aa12.54□□□□□ -0.4
CLN8-203ENST00000518780 ZCRB1Q8TBF4 217 aaKnown RBP12.53□□□□□ -0.4
CLN8-203ENST00000518780 OVOS2A0A0G2JMS6 1433 aa12.53□□□□□ -0.4
CLN8-203ENST00000518780 DDB1Q16531 1140 aa12.52□□□□□ -0.41
CLN8-203ENST00000518780 FAM98CQ17RN3 349 aaKnown RBP12.52□□□□□ -0.41
CLN8-203ENST00000518780 HTATSF1O43719 755 aaKnown RBP12.51□□□□□ -0.41
CLN8-203ENST00000518780 HSP90AB1P08238 724 aaKnown RBP12.51□□□□□ -0.41
CLN8-203ENST00000518780 RGPD5Q99666 1765 aa12.51□□□□□ -0.41
CLN8-203ENST00000518780 LMOD3Q0VAK6 560 aa12.5□□□□□ -0.41
CLN8-203ENST00000518780 NFE2L2Q16236 605 aa12.5□□□□□ -0.41
CLN8-203ENST00000518780 POTEAQ6S8J7 498 aa12.5□□□□□ -0.41
CLN8-203ENST00000518780 IFNL2Q8IZJ0 200 aa12.5□□□□□ -0.41
CLN8-203ENST00000518780 PHACTR3Q96KR7 559 aa12.5□□□□□ -0.41
CLN8-203ENST00000518780 PCDH11XQ9BZA7 1347 aa12.5□□□□□ -0.41
CLN8-203ENST00000518780 PCDH11YQ9BZA8 1340 aa12.5□□□□□ -0.41
CLN8-203ENST00000518780 MEGF6O75095 1541 aa12.49□□□□□ -0.41
CLN8-203ENST00000518780 PDE3BQ13370 1112 aa12.49□□□□□ -0.41
CLN8-203ENST00000518780 MTHFSDQ2M296 383 aaKnown RBP12.49□□□□□ -0.41
CLN8-203ENST00000518780 AKAP4Q5JQC9 854 aa12.49□□□□□ -0.41
CLN8-203ENST00000518780 C1orf141Q5JVX7 400 aa12.49□□□□□ -0.41
CLN8-203ENST00000518780 SEPT12Q8IYM1 358 aa12.49□□□□□ -0.41
CLN8-203ENST00000518780 TMPOP42166 694 aaKnown RBP12.48□□□□□ -0.41
CLN8-203ENST00000518780 NKX1-1Q15270 411 aaPredicted RBP12.48□□□□□ -0.41
CLN8-203ENST00000518780 CCDC27Q2M243 656 aa12.48□□□□□ -0.41
CLN8-203ENST00000518780 ZNF530Q6P9A1 599 aaPredicted RBP12.48□□□□□ -0.41
CLN8-203ENST00000518780 GLI3P10071 1580 aa12.47□□□□□ -0.41
CLN8-203ENST00000518780 TNS2Q63HR2 1409 aa12.47□□□□□ -0.41
CLN8-203ENST00000518780 A0A0G2JS52 829 aa12.47□□□□□ -0.41
CLN8-203ENST00000518780 GNAT3A8MTJ3 354 aa12.47□□□□□ -0.41
CLN8-203ENST00000518780 APAF1O14727 1248 aa12.47□□□□□ -0.41
CLN8-203ENST00000518780 PHKG2P15735 406 aa12.47□□□□□ -0.41
CLN8-203ENST00000518780 MYT1Q01538 1121 aa12.47□□□□□ -0.41
CLN8-203ENST00000518780 CCDC146Q8IYE0 955 aa12.47□□□□□ -0.41
CLN8-203ENST00000518780 RTF1Q92541 710 aaKnown RBP12.47□□□□□ -0.41
CLN8-203ENST00000518780 DCAF5Q96JK2 942 aa12.47□□□□□ -0.41
CLN8-203ENST00000518780 CYP27B1O15528 508 aa12.46□□□□□ -0.41
CLN8-203ENST00000518780 RIPK4P57078 832 aa12.46□□□□□ -0.41
CLN8-203ENST00000518780 BCL9O00512 1426 aa12.45□□□□□ -0.42
CLN8-203ENST00000518780 CALD1Q05682 793 aaKnown RBP12.45□□□□□ -0.42
CLN8-203ENST00000518780 KRT27Q7Z3Y8 459 aa12.45□□□□□ -0.42
CLN8-203ENST00000518780 DDX54Q8TDD1 881 aaKnown RBP12.45□□□□□ -0.42
CLN8-203ENST00000518780 MAP3K5Q99683 1374 aa12.44□□□□□ -0.42
CLN8-203ENST00000518780 ERVV-2B6SEH9 535 aa12.44□□□□□ -0.42
CLN8-203ENST00000518780 MARCH10Q8NA82 808 aaPredicted RBP12.44□□□□□ -0.42
CLN8-203ENST00000518780 PARP4Q9UKK3 1724 aaKnown RBP12.44□□□□□ -0.42
CLN8-203ENST00000518780 THSD7AQ9UPZ6 1657 aa12.44□□□□□ -0.42
CLN8-203ENST00000518780 FAM196AQ6ZSG2 479 aa12.43□□□□□ -0.42
CLN8-203ENST00000518780 RGPD2P0DJD1 1756 aa12.43□□□□□ -0.42
CLN8-203ENST00000518780 WDR63Q8IWG1 891 aa12.42□□□□□ -0.42
CLN8-203ENST00000518780 BABAM1Q9NWV8 329 aa12.42□□□□□ -0.42
CLN8-203ENST00000518780 RNMTO43148 476 aaKnown RBP12.41□□□□□ -0.42
CLN8-203ENST00000518780 NEUROD2Q15784 382 aa12.41□□□□□ -0.42
CLN8-203ENST00000518780 PKD1L3Q7Z443 1732 aa12.41□□□□□ -0.42
CLN8-203ENST00000518780 WWC1Q8IX03 1113 aa12.41□□□□□ -0.42
CLN8-203ENST00000518780 IL17REQ8NFR9 667 aa12.41□□□□□ -0.42
CLN8-203ENST00000518780 TRIM35Q9UPQ4 493 aa12.41□□□□□ -0.42
CLN8-203ENST00000518780 CEMIPQ8WUJ3 1361 aa12.41□□□□□ -0.42
CLN8-203ENST00000518780 IL16Q14005 1332 aa12.4□□□□□ -0.42
CLN8-203ENST00000518780 RGS12O14924 1447 aa12.4□□□□□ -0.42
CLN8-203ENST00000518780 HNRNPUQ00839 825 aaKnown RBP eCLIP12.4□□□□□ -0.42
CLN8-203ENST00000518780 TEFQ10587 303 aa12.4□□□□□ -0.42
CLN8-203ENST00000518780 MPRIPQ6WCQ1 1025 aa12.4□□□□□ -0.42
CLN8-203ENST00000518780 RRP7AQ9Y3A4 280 aaKnown RBP12.4□□□□□ -0.42
CLN8-203ENST00000518780 CABP4P57796 275 aa12.39□□□□□ -0.43
CLN8-203ENST00000518780 LRRC37A3O60309 1634 aa12.39□□□□□ -0.43
CLN8-203ENST00000518780 ZBED9Q6R2W3 1325 aa12.38□□□□□ -0.43
CLN8-203ENST00000518780 TAF7Q15545 349 aaPredicted RBP12.38□□□□□ -0.43
CLN8-203ENST00000518780 SLC52A2Q9HAB3 445 aa12.38□□□□□ -0.43
CLN8-203ENST00000518780 LGR6Q9HBX8 967 aa12.38□□□□□ -0.43
CLN8-203ENST00000518780 WNK3Q9BYP7 1800 aa12.38□□□□□ -0.43
CLN8-203ENST00000518780 ZNF521Q96K83 1311 aa12.37□□□□□ -0.43
CLN8-203ENST00000518780 MCM10Q7L590 875 aa12.37□□□□□ -0.43
CLN8-203ENST00000518780 CFAP44Q96MT7 982 aa12.37□□□□□ -0.43
CLN8-203ENST00000518780 TMOD3Q9NYL9 352 aa12.37□□□□□ -0.43
CLN8-203ENST00000518780 KDM6AO15550 1401 aaPredicted RBP12.37□□□□□ -0.43
CLN8-203ENST00000518780 HMGB2P26583 209 aaKnown RBP12.36□□□□□ -0.43
CLN8-203ENST00000518780 PRIM1P49642 420 aaKnown RBP12.36□□□□□ -0.43
CLN8-203ENST00000518780 GNAI1P63096 354 aa12.36□□□□□ -0.43
CLN8-203ENST00000518780 GOLGA2Q08379 1002 aa12.36□□□□□ -0.43
CLN8-203ENST00000518780 NFATC2IPQ8NCF5 419 aa12.36□□□□□ -0.43
CLN8-203ENST00000518780 BCL11BQ9C0K0 894 aaPredicted RBP12.36□□□□□ -0.43
CLN8-203ENST00000518780 IFT57Q9NWB7 429 aa12.36□□□□□ -0.43
CLN8-203ENST00000518780 E9PSI1 815 aa12.35□□□□□ -0.43
CLN8-203ENST00000518780 CHL1O00533 1208 aa12.35□□□□□ -0.43
CLN8-203ENST00000518780 DCTN1Q14203 1278 aa12.35□□□□□ -0.43
CLN8-203ENST00000518780 SMARCC1Q92922 1105 aaPredicted RBP12.35□□□□□ -0.43
CLN8-203ENST00000518780 MYH16Q9H6N6 1097 aa12.35□□□□□ -0.43
CLN8-203ENST00000518780 BTBD11A6QL63 1104 aa12.34□□□□□ -0.43
CLN8-203ENST00000518780 ZNF853P0CG23 659 aa12.34□□□□□ -0.43
CLN8-203ENST00000518780 CCDC125Q86Z20 511 aa12.34□□□□□ -0.43
CLN8-203ENST00000518780 PIGBQ92521 554 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms