RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 SULT6B1Q6IMI4 303 aa23.23■■□□□ 1.31
SDC2-202ENST00000518385 EYA1Q99502 592 aa23.23■■□□□ 1.31
SDC2-202ENST00000518385 ZBTB7CA1YPR0 619 aa23.23■■□□□ 1.31
SDC2-202ENST00000518385 IGSF1Q8N6C5 1336 aa23.22■■□□□ 1.31
SDC2-202ENST00000518385 ALDH1L2Q3SY69 923 aa23.22■■□□□ 1.31
SDC2-202ENST00000518385 TSR2Q969E8 191 aaKnown RBP23.22■■□□□ 1.31
SDC2-202ENST00000518385 LRRC59Q96AG4 307 aaKnown RBP23.22■■□□□ 1.31
SDC2-202ENST00000518385 ZNF853P0CG23 659 aa23.21■■□□□ 1.31
SDC2-202ENST00000518385 BECN1Q14457 450 aa23.21■■□□□ 1.31
SDC2-202ENST00000518385 KDRP35968 1356 aa23.2■■□□□ 1.3
SDC2-202ENST00000518385 AEBP1Q8IUX7 1158 aa23.2■■□□□ 1.3
SDC2-202ENST00000518385 CPDO75976 1380 aa23.2■■□□□ 1.3
SDC2-202ENST00000518385 BRPF1P55201 1214 aaPredicted RBP23.19■■□□□ 1.3
SDC2-202ENST00000518385 ZKSCAN2Q63HK3 967 aa23.19■■□□□ 1.3
SDC2-202ENST00000518385 LTV1Q96GA3 475 aaPredicted RBP23.19■■□□□ 1.3
SDC2-202ENST00000518385 CFAP44Q96MT7 982 aa23.18■■□□□ 1.3
SDC2-202ENST00000518385 AXIN2Q9Y2T1 843 aa23.18■■□□□ 1.3
SDC2-202ENST00000518385 DLG5Q8TDM6 1919 aa23.18■■□□□ 1.3
SDC2-202ENST00000518385 FRAT1Q92837 279 aaPredicted RBP23.18■■□□□ 1.3
SDC2-202ENST00000518385 UBAP1LF5GYI3 381 aa23.17■■□□□ 1.3
SDC2-202ENST00000518385 IPO8O15397 1037 aaKnown RBP23.16■■□□□ 1.3
SDC2-202ENST00000518385 CERKQ8TCT0 537 aa23.16■■□□□ 1.3
SDC2-202ENST00000518385 KIF16BQ96L93 1317 aa23.16■■□□□ 1.3
SDC2-202ENST00000518385 COL18A1P39060 1754 aa23.15■■□□□ 1.3
SDC2-202ENST00000518385 PIP4K2BP78356 416 aa23.15■■□□□ 1.3
SDC2-202ENST00000518385 ANKRD24Q8TF21 1146 aa23.15■■□□□ 1.3
SDC2-202ENST00000518385 SMC4Q9NTJ3 1288 aa23.15■■□□□ 1.3
SDC2-202ENST00000518385 ABCC6O95255 1503 aa23.15■■□□□ 1.3
SDC2-202ENST00000518385 HAP1P54257 671 aaPredicted RBP23.14■■□□□ 1.3
SDC2-202ENST00000518385 CLUAP1Q96AJ1 413 aa23.14■■□□□ 1.3
SDC2-202ENST00000518385 KIAA0232Q92628 1395 aa23.14■■□□□ 1.3
SDC2-202ENST00000518385 NBPF6Q5VWK0 638 aa23.14■■□□□ 1.29
SDC2-202ENST00000518385 SSH1Q8WYL5 1049 aa23.14■■□□□ 1.29
SDC2-202ENST00000518385 NBPF4Q96M43 638 aa23.14■■□□□ 1.29
SDC2-202ENST00000518385 IL27Q8NEV9 243 aa23.13■■□□□ 1.29
SDC2-202ENST00000518385 PANK1Q8TE04 598 aa23.13■■□□□ 1.29
SDC2-202ENST00000518385 HTATSF1O43719 755 aaKnown RBP23.12■■□□□ 1.29
SDC2-202ENST00000518385 DZIP1LQ8IYY4 767 aaKnown RBP23.12■■□□□ 1.29
SDC2-202ENST00000518385 COG6Q9Y2V7 657 aa23.12■■□□□ 1.29
SDC2-202ENST00000518385 RGPD5Q99666 1765 aa23.11■■□□□ 1.29
SDC2-202ENST00000518385 CHRNA2Q15822 529 aa23.11■■□□□ 1.29
SDC2-202ENST00000518385 GAS2L2Q8NHY3 880 aa23.11■■□□□ 1.29
SDC2-202ENST00000518385 PHLPP1O60346 1717 aa23.11■■□□□ 1.29
SDC2-202ENST00000518385 ABCA3Q99758 1704 aa23.11■■□□□ 1.29
SDC2-202ENST00000518385 ERBB3P21860 1342 aa23.1■■□□□ 1.29
SDC2-202ENST00000518385 ATF7IPQ6VMQ6 1270 aa23.1■■□□□ 1.29
SDC2-202ENST00000518385 BCL2L13Q9BXK5 485 aa23.1■■□□□ 1.29
SDC2-202ENST00000518385 MBIPQ9NS73 344 aa23.1■■□□□ 1.29
SDC2-202ENST00000518385 VAMP4O75379 141 aa23.09■■□□□ 1.29
SDC2-202ENST00000518385 MVPQ14764 893 aaKnown RBP23.09■■□□□ 1.29
SDC2-202ENST00000518385 FTSJ3Q8IY81 847 aaKnown RBP23.09■■□□□ 1.29
SDC2-202ENST00000518385 ARHGAP45Q92619 1136 aa23.09■■□□□ 1.29
SDC2-202ENST00000518385 PRDM11Q9NQV5 511 aa23.09■■□□□ 1.29
SDC2-202ENST00000518385 NCAPD2Q15021 1401 aa23.08■■□□□ 1.29
SDC2-202ENST00000518385 COL16A1Q07092 1604 aaPredicted RBP23.08■■□□□ 1.29
SDC2-202ENST00000518385 COL22A1Q8NFW1 1626 aaPredicted RBP23.08■■□□□ 1.29
SDC2-202ENST00000518385 USHBP1Q8N6Y0 703 aa23.08■■□□□ 1.29
SDC2-202ENST00000518385 UPF2Q9HAU5 1272 aaKnown RBP23.08■■□□□ 1.29
SDC2-202ENST00000518385 THUMPD2Q9BTF0 503 aaKnown RBP23.07■■□□□ 1.28
SDC2-202ENST00000518385 RGPD2P0DJD1 1756 aa23.07■■□□□ 1.28
SDC2-202ENST00000518385 CHL1O00533 1208 aa23.06■■□□□ 1.28
SDC2-202ENST00000518385 RLBP1P12271 317 aa23.06■■□□□ 1.28
SDC2-202ENST00000518385 RGS3P49796 1198 aa23.06■■□□□ 1.28
SDC2-202ENST00000518385 CHMP4BQ9H444 224 aaKnown RBP23.06■■□□□ 1.28
SDC2-202ENST00000518385 DDX19BQ9UMR2 479 aa23.06■■□□□ 1.28
SDC2-202ENST00000518385 TRIM27P14373 513 aa23.05■■□□□ 1.28
SDC2-202ENST00000518385 MTHFSDQ2M296 383 aaKnown RBP23.05■■□□□ 1.28
SDC2-202ENST00000518385 RTF1Q92541 710 aaKnown RBP23.05■■□□□ 1.28
SDC2-202ENST00000518385 NOB1Q9ULX3 412 aaKnown RBP23.05■■□□□ 1.28
SDC2-202ENST00000518385 CAMTA1Q9Y6Y1 1673 aa23.05■■□□□ 1.28
SDC2-202ENST00000518385 FAM83GA6ND36 823 aa23.04■■□□□ 1.28
SDC2-202ENST00000518385 L1TD1Q5T7N2 865 aaKnown RBP23.04■■□□□ 1.28
SDC2-202ENST00000518385 FAM43AQ8N2R8 423 aa23.04■■□□□ 1.28
SDC2-202ENST00000518385 TWISTNBQ3B726 338 aaPredicted RBP23.03■■□□□ 1.28
SDC2-202ENST00000518385 LMO7Q8WWI1 1683 aa23.03■■□□□ 1.28
SDC2-202ENST00000518385 MRPL50Q8N5N7 158 aaKnown RBP23.01■■□□□ 1.27
SDC2-202ENST00000518385 NLRP2Q9NX02 1062 aa23.01■■□□□ 1.27
SDC2-202ENST00000518385 CRB1P82279 1406 aa23.01■■□□□ 1.27
SDC2-202ENST00000518385 CSB-PGBD3P0DP91 1061 aa23.01■■□□□ 1.27
SDC2-202ENST00000518385 RWDD1Q9H446 243 aaPredicted RBP23.01■■□□□ 1.27
SDC2-202ENST00000518385 BABAM1Q9NWV8 329 aa23.01■■□□□ 1.27
SDC2-202ENST00000518385 SKAP1Q86WV1 359 aa23■■□□□ 1.27
SDC2-202ENST00000518385 FAM208AQ9UK61 1670 aaKnown RBP23■■□□□ 1.27
SDC2-202ENST00000518385 DCTN1Q14203 1278 aa22.99■■□□□ 1.27
SDC2-202ENST00000518385 WDR17Q8IZU2 1322 aa22.98■■□□□ 1.27
SDC2-202ENST00000518385 FRAT2O75474 233 aaPredicted RBP22.97■■□□□ 1.27
SDC2-202ENST00000518385 IGHDP01880 384 aa22.97■■□□□ 1.27
SDC2-202ENST00000518385 MCM10Q7L590 875 aa22.97■■□□□ 1.27
SDC2-202ENST00000518385 TSPYL6Q8N831 410 aa22.97■■□□□ 1.27
SDC2-202ENST00000518385 TNNQ9UQP3 1299 aa22.97■■□□□ 1.27
SDC2-202ENST00000518385 GNAT3A8MTJ3 354 aa22.97■■□□□ 1.27
SDC2-202ENST00000518385 SLC4A3P48751 1232 aa22.97■■□□□ 1.27
SDC2-202ENST00000518385 AMOTQ4VCS5 1084 aa22.97■■□□□ 1.27
SDC2-202ENST00000518385 PLEKHO1Q53GL0 409 aaPredicted RBP22.97■■□□□ 1.27
SDC2-202ENST00000518385 C8orf58Q8NAV2 365 aa22.97■■□□□ 1.27
SDC2-202ENST00000518385 COL5A2P05997 1499 aaPredicted RBP22.97■■□□□ 1.27
SDC2-202ENST00000518385 SOS1Q07889 1333 aaPredicted RBP22.96■■□□□ 1.27
SDC2-202ENST00000518385 API5Q9BZZ5 524 aaKnown RBP22.96■■□□□ 1.27
SDC2-202ENST00000518385 PCDHB15Q9Y5E8 787 aa22.94■■□□□ 1.26
SDC2-202ENST00000518385 MAP3K5Q99683 1374 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms