RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 KIF24Q5T7B8 1368 aa14.54□□□□□ -0.08
SPIDR-205ENST00000518060 RGPD3A6NKT7 1758 aaPredicted RBP14.54□□□□□ -0.08
SPIDR-205ENST00000518060 RGPD4Q7Z3J3 1758 aa14.54□□□□□ -0.08
SPIDR-205ENST00000518060 PROM2Q8N271 834 aa14.53□□□□□ -0.08
SPIDR-205ENST00000518060 PPP1R1BQ9UD71 204 aaPredicted RBP14.53□□□□□ -0.08
SPIDR-205ENST00000518060 RGPD2P0DJD1 1756 aa14.52□□□□□ -0.09
SPIDR-205ENST00000518060 PRIM1P49642 420 aaKnown RBP14.51□□□□□ -0.09
SPIDR-205ENST00000518060 SPON1Q9HCB6 807 aa14.51□□□□□ -0.09
SPIDR-205ENST00000518060 PCDH11XQ9BZA7 1347 aa14.49□□□□□ -0.09
SPIDR-205ENST00000518060 PCDH11YQ9BZA8 1340 aa14.49□□□□□ -0.09
SPIDR-205ENST00000518060 MORC1Q86VD1 984 aa14.49□□□□□ -0.09
SPIDR-205ENST00000518060 POLKQ9UBT6 870 aa14.49□□□□□ -0.09
SPIDR-205ENST00000518060 KNSTRNQ9Y448 316 aa14.49□□□□□ -0.09
SPIDR-205ENST00000518060 WASHC2AQ641Q2 1341 aa14.48□□□□□ -0.09
SPIDR-205ENST00000518060 ZBTB7AO95365 584 aa14.48□□□□□ -0.09
SPIDR-205ENST00000518060 SLC15A2Q16348 729 aa14.48□□□□□ -0.09
SPIDR-205ENST00000518060 DOT1LQ8TEK3 1739 aa14.48□□□□□ -0.09
SPIDR-205ENST00000518060 BTAF1O14981 1849 aa14.48□□□□□ -0.09
SPIDR-205ENST00000518060 NSD2O96028 1365 aa14.47□□□□□ -0.09
SPIDR-205ENST00000518060 KIF7Q2M1P5 1343 aa14.47□□□□□ -0.09
SPIDR-205ENST00000518060 KAT6BQ8WYB5 2073 aa14.47□□□□□ -0.09
SPIDR-205ENST00000518060 PDGFDQ9GZP0 370 aaPredicted RBP14.47□□□□□ -0.09
SPIDR-205ENST00000518060 EYA1Q99502 592 aa14.46□□□□□ -0.09
SPIDR-205ENST00000518060 KCNQ4P56696 695 aa14.45□□□□□ -0.1
SPIDR-205ENST00000518060 EIF4A2Q14240 407 aaKnown RBP14.45□□□□□ -0.1
SPIDR-205ENST00000518060 ANKRD26Q9UPS8 1709 aa14.45□□□□□ -0.1
SPIDR-205ENST00000518060 SPG7Q9UQ90 795 aa14.45□□□□□ -0.1
SPIDR-205ENST00000518060 ATF5Q9Y2D1 282 aaPredicted RBP14.45□□□□□ -0.1
SPIDR-205ENST00000518060 SHANK3Q9BYB0 1731 aa14.44□□□□□ -0.1
SPIDR-205ENST00000518060 CNGB1Q14028 1251 aaPredicted RBP14.44□□□□□ -0.1
SPIDR-205ENST00000518060 ZNF827Q17R98 1081 aa14.44□□□□□ -0.1
SPIDR-205ENST00000518060 SLC27A3Q5K4L6 730 aa14.44□□□□□ -0.1
SPIDR-205ENST00000518060 MPRIPQ6WCQ1 1025 aa14.44□□□□□ -0.1
SPIDR-205ENST00000518060 LRRC4BQ9NT99 713 aa14.44□□□□□ -0.1
SPIDR-205ENST00000518060 CCNL1Q9UK58 526 aaPredicted RBP14.44□□□□□ -0.1
SPIDR-205ENST00000518060 CYP27B1O15528 508 aa14.43□□□□□ -0.1
SPIDR-205ENST00000518060 CASZ1Q86V15 1759 aa14.42□□□□□ -0.1
SPIDR-205ENST00000518060 TFCP2L1Q9NZI6 479 aa14.41□□□□□ -0.1
SPIDR-205ENST00000518060 MAP2P11137 1827 aaKnown RBP14.41□□□□□ -0.1
SPIDR-205ENST00000518060 PAPPAQ13219 1627 aa14.41□□□□□ -0.1
SPIDR-205ENST00000518060 MSH5O43196 834 aa14.4□□□□□ -0.1
SPIDR-205ENST00000518060 CC2D1BQ5T0F9 858 aaKnown RBP14.4□□□□□ -0.1
SPIDR-205ENST00000518060 MTFR1LQ9H019 292 aa14.4□□□□□ -0.1
SPIDR-205ENST00000518060 NCAPD2Q15021 1401 aa14.4□□□□□ -0.1
SPIDR-205ENST00000518060 PALLDQ8WX93 1383 aa14.39□□□□□ -0.11
SPIDR-205ENST00000518060 DCAF8L1A6NGE4 600 aa14.39□□□□□ -0.11
SPIDR-205ENST00000518060 IGSF1Q8N6C5 1336 aa14.39□□□□□ -0.11
SPIDR-205ENST00000518060 PKD1L3Q7Z443 1732 aa14.38□□□□□ -0.11
SPIDR-205ENST00000518060 AMER1Q5JTC6 1135 aaPredicted RBP14.38□□□□□ -0.11
SPIDR-205ENST00000518060 IFNL2Q8IZJ0 200 aa14.38□□□□□ -0.11
SPIDR-205ENST00000518060 AKT1S1Q96B36 256 aa14.38□□□□□ -0.11
SPIDR-205ENST00000518060 KLHL34Q8N239 644 aa14.37□□□□□ -0.11
SPIDR-205ENST00000518060 TMOD3Q9NYL9 352 aa14.37□□□□□ -0.11
SPIDR-205ENST00000518060 PHKG2P15735 406 aa14.36□□□□□ -0.11
SPIDR-205ENST00000518060 PTGER2P43116 358 aa14.36□□□□□ -0.11
SPIDR-205ENST00000518060 PLEKHO1Q53GL0 409 aaPredicted RBP14.36□□□□□ -0.11
SPIDR-205ENST00000518060 ZNF530Q6P9A1 599 aaPredicted RBP14.36□□□□□ -0.11
SPIDR-205ENST00000518060 AEBP1Q8IUX7 1158 aa14.36□□□□□ -0.11
SPIDR-205ENST00000518060 SMARCC1Q92922 1105 aaPredicted RBP14.36□□□□□ -0.11
SPIDR-205ENST00000518060 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.36□□□□□ -0.11
SPIDR-205ENST00000518060 PNPLA7Q6ZV29 1317 aa14.36□□□□□ -0.11
SPIDR-205ENST00000518060 POLD1P28340 1107 aa14.35□□□□□ -0.11
SPIDR-205ENST00000518060 NKX1-1Q15270 411 aaPredicted RBP14.35□□□□□ -0.11
SPIDR-205ENST00000518060 SULT6B1Q6IMI4 303 aa14.35□□□□□ -0.11
SPIDR-205ENST00000518060 PIGBQ92521 554 aa14.35□□□□□ -0.11
SPIDR-205ENST00000518060 TOGARAM1Q9Y4F4 1720 aa14.35□□□□□ -0.11
SPIDR-205ENST00000518060 AK7Q96M32 723 aa14.34□□□□□ -0.11
SPIDR-205ENST00000518060 ARXQ96QS3 562 aa14.34□□□□□ -0.11
SPIDR-205ENST00000518060 LY75O60449 1722 aa14.33□□□□□ -0.12
SPIDR-205ENST00000518060 HSP90AB1P08238 724 aaKnown RBP14.33□□□□□ -0.12
SPIDR-205ENST00000518060 MTHFSP49914 203 aa14.33□□□□□ -0.12
SPIDR-205ENST00000518060 C1orf141Q5JVX7 400 aa14.33□□□□□ -0.12
SPIDR-205ENST00000518060 FHDC1Q9C0D6 1143 aaPredicted RBP14.33□□□□□ -0.12
SPIDR-205ENST00000518060 AMOTQ4VCS5 1084 aa14.32□□□□□ -0.12
SPIDR-205ENST00000518060 PHF14O94880 888 aa14.31□□□□□ -0.12
SPIDR-205ENST00000518060 HMGB2P26583 209 aaKnown RBP14.31□□□□□ -0.12
SPIDR-205ENST00000518060 IL13P35225 146 aa14.31□□□□□ -0.12
SPIDR-205ENST00000518060 MSL1Q68DK7 614 aa14.31□□□□□ -0.12
SPIDR-205ENST00000518060 SLC16A10Q8TF71 515 aa14.31□□□□□ -0.12
SPIDR-205ENST00000518060 ASAP1Q9ULH1 1129 aa14.31□□□□□ -0.12
SPIDR-205ENST00000518060 LOC102724428A0A0B4J2F2 783 aa14.3□□□□□ -0.12
SPIDR-205ENST00000518060 PER1O15534 1290 aaPredicted RBP14.3□□□□□ -0.12
SPIDR-205ENST00000518060 HMOX1P09601 288 aa14.3□□□□□ -0.12
SPIDR-205ENST00000518060 SIK1P57059 783 aa14.3□□□□□ -0.12
SPIDR-205ENST00000518060 CABP4P57796 275 aa14.3□□□□□ -0.12
SPIDR-205ENST00000518060 COL23A1Q86Y22 540 aaPredicted RBP14.3□□□□□ -0.12
SPIDR-205ENST00000518060 DCAF5Q96JK2 942 aa14.3□□□□□ -0.12
SPIDR-205ENST00000518060 SGIP1Q9BQI5 828 aa14.3□□□□□ -0.12
SPIDR-205ENST00000518060 PLEKHG2Q9H7P9 1386 aa14.3□□□□□ -0.12
SPIDR-205ENST00000518060 C5P01031 1676 aa14.3□□□□□ -0.12
SPIDR-205ENST00000518060 DIAPH1O60610 1272 aaKnown RBP14.29□□□□□ -0.12
SPIDR-205ENST00000518060 ATP6V1AP38606 617 aa14.29□□□□□ -0.12
SPIDR-205ENST00000518060 SYT17Q9BSW7 474 aa14.29□□□□□ -0.12
SPIDR-205ENST00000518060 U2SURPO15042 1029 aaKnown RBP14.28□□□□□ -0.12
SPIDR-205ENST00000518060 ITGB4P16144 1822 aa14.28□□□□□ -0.12
SPIDR-205ENST00000518060 RBM42Q9BTD8 480 aaKnown RBP14.28□□□□□ -0.12
SPIDR-205ENST00000518060 ATG3Q9NT62 314 aa14.28□□□□□ -0.12
SPIDR-205ENST00000518060 TUBGCP6Q96RT7 1819 aa14.27□□□□□ -0.12
SPIDR-205ENST00000518060 KDM6AO15550 1401 aaPredicted RBP14.27□□□□□ -0.12
SPIDR-205ENST00000518060 KDRP35968 1356 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms