RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 LTV1Q96GA3 475 aaPredicted RBP15.22■□□□□ 0.03
ARFGEF1-202ENST00000517955 C8orf37Q96NL8 207 aa15.22■□□□□ 0.03
ARFGEF1-202ENST00000517955 RGPD2P0DJD1 1756 aa15.21■□□□□ 0.03
ARFGEF1-202ENST00000517955 MEX3CQ5U5Q3 659 aaKnown RBP15.21■□□□□ 0.03
ARFGEF1-202ENST00000517955 PLEKHF1Q96S99 279 aa15.21■□□□□ 0.03
ARFGEF1-202ENST00000517955 RSPH6AQ9H0K4 717 aa15.21■□□□□ 0.03
ARFGEF1-202ENST00000517955 CSB-PGBD3P0DP91 1061 aa15.2■□□□□ 0.02
ARFGEF1-202ENST00000517955 VPS72Q15906 364 aa15.2■□□□□ 0.02
ARFGEF1-202ENST00000517955 SULT6B1Q6IMI4 303 aa15.2■□□□□ 0.02
ARFGEF1-202ENST00000517955 LARP1Q6PKG0 1096 aaKnown RBP15.2■□□□□ 0.02
ARFGEF1-202ENST00000517955 THRAP3Q9Y2W1 955 aaKnown RBP15.2■□□□□ 0.02
ARFGEF1-202ENST00000517955 TOM1L2Q6ZVM7 507 aa15.19■□□□□ 0.02
ARFGEF1-202ENST00000517955 FAM9BQ8IZU0 186 aa15.19■□□□□ 0.02
ARFGEF1-202ENST00000517955 NLRP2Q9NX02 1062 aa15.19■□□□□ 0.02
ARFGEF1-202ENST00000517955 USP21Q9UK80 565 aa15.19■□□□□ 0.02
ARFGEF1-202ENST00000517955 SPATA31A5Q5VU36 1347 aa15.18■□□□□ 0.02
ARFGEF1-202ENST00000517955 SPATA31A7Q8IWB4 1347 aa15.18■□□□□ 0.02
ARFGEF1-202ENST00000517955 RUNDC1Q96C34 613 aa15.18■□□□□ 0.02
ARFGEF1-202ENST00000517955 STRN4Q9NRL3 753 aa15.18■□□□□ 0.02
ARFGEF1-202ENST00000517955 AFF2P51816 1311 aa15.17■□□□□ 0.02
ARFGEF1-202ENST00000517955 SPATA31A1Q5TZJ5 1347 aa15.17■□□□□ 0.02
ARFGEF1-202ENST00000517955 HMOX1P09601 288 aa15.17■□□□□ 0.02
ARFGEF1-202ENST00000517955 AEBP1Q8IUX7 1158 aa15.17■□□□□ 0.02
ARFGEF1-202ENST00000517955 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.17■□□□□ 0.023e-6■■□□□ 13.5
ARFGEF1-202ENST00000517955 ATRNO75882 1429 aa15.17■□□□□ 0.02
ARFGEF1-202ENST00000517955 BARGINQ6ZT62 677 aa15.16■□□□□ 0.02
ARFGEF1-202ENST00000517955 NGEFQ8N5V2 710 aa15.16■□□□□ 0.02
ARFGEF1-202ENST00000517955 SPDYE1Q8NFV5 336 aaPredicted RBP15.16■□□□□ 0.02
ARFGEF1-202ENST00000517955 CDCA7Q9BWT1 371 aaPredicted RBP15.16■□□□□ 0.02
ARFGEF1-202ENST00000517955 SPDYE4A6NLX3 237 aa15.15■□□□□ 0.02
ARFGEF1-202ENST00000517955 PRKAR2BP31323 418 aa15.15■□□□□ 0.02
ARFGEF1-202ENST00000517955 ZNF772Q68DY9 489 aaPredicted RBP15.15■□□□□ 0.02
ARFGEF1-202ENST00000517955 TCP11L2Q8N4U5 519 aa15.15■□□□□ 0.02
ARFGEF1-202ENST00000517955 TRPC5Q9UL62 973 aaPredicted RBP15.15■□□□□ 0.02
ARFGEF1-202ENST00000517955 DISP2A7MBM2 1401 aa15.15■□□□□ 0.02
ARFGEF1-202ENST00000517955 AMOTQ4VCS5 1084 aa15.14■□□□□ 0.01
ARFGEF1-202ENST00000517955 USHBP1Q8N6Y0 703 aa15.14■□□□□ 0.01
ARFGEF1-202ENST00000517955 ONECUT3O60422 494 aaPredicted RBP15.13■□□□□ 0.01
ARFGEF1-202ENST00000517955 NEFMP07197 916 aa15.13■□□□□ 0.01
ARFGEF1-202ENST00000517955 IL2RBP14784 551 aa15.13■□□□□ 0.01
ARFGEF1-202ENST00000517955 RAPGEF4Q8WZA2 1011 aa15.13■□□□□ 0.01
ARFGEF1-202ENST00000517955 PHACTR3Q96KR7 559 aa15.13■□□□□ 0.01
ARFGEF1-202ENST00000517955 PARP4Q9UKK3 1724 aaKnown RBP15.12■□□□□ 0.01
ARFGEF1-202ENST00000517955 OVOS2A0A0G2JMS6 1433 aa15.12■□□□□ 0.01
ARFGEF1-202ENST00000517955 TATP17735 454 aaPredicted RBP15.12■□□□□ 0.01
ARFGEF1-202ENST00000517955 GJD4Q96KN9 370 aaPredicted RBP15.12■□□□□ 0.01
ARFGEF1-202ENST00000517955 MEGF6O75095 1541 aa15.12■□□□□ 0.01
ARFGEF1-202ENST00000517955 WNK3Q9BYP7 1800 aa15.11■□□□□ 0.01
ARFGEF1-202ENST00000517955 PLEKHO1Q53GL0 409 aaPredicted RBP15.11■□□□□ 0.01
ARFGEF1-202ENST00000517955 QTRT2Q9H974 415 aaKnown RBP15.11■□□□□ 0.01
ARFGEF1-202ENST00000517955 PKD1L3Q7Z443 1732 aa15.11■□□□□ 0.01
ARFGEF1-202ENST00000517955 MAPK8IP3Q9UPT6 1336 aa15.11■□□□□ 0.01
ARFGEF1-202ENST00000517955 TMPOP42166 694 aaKnown RBP15.1■□□□□ 0.01
ARFGEF1-202ENST00000517955 NFE2L2Q16236 605 aa15.1■□□□□ 0.01
ARFGEF1-202ENST00000517955 CCDC27Q2M243 656 aa15.1■□□□□ 0.01
ARFGEF1-202ENST00000517955 CCDC146Q8IYE0 955 aa15.1■□□□□ 0.01
ARFGEF1-202ENST00000517955 GAS2L2Q8NHY3 880 aa15.1■□□□□ 0.01
ARFGEF1-202ENST00000517955 APAF1O14727 1248 aa15.09■□□□□ 0.01
ARFGEF1-202ENST00000517955 HTATSF1O43719 755 aaKnown RBP15.09■□□□□ 0.01
ARFGEF1-202ENST00000517955 SPG7Q9UQ90 795 aa15.09■□□□□ 0.01
ARFGEF1-202ENST00000517955 GLI3P10071 1580 aa15.09■□□□□ 0.01
ARFGEF1-202ENST00000517955 MTHFSDQ2M296 383 aaKnown RBP15.08■□□□□ 0
ARFGEF1-202ENST00000517955 ZCRB1Q8TBF4 217 aaKnown RBP15.08■□□□□ 0
ARFGEF1-202ENST00000517955 USP35Q9P2H5 1018 aa15.08■□□□□ 0
ARFGEF1-202ENST00000517955 THSD7AQ9UPZ6 1657 aa15.07■□□□□ 0
ARFGEF1-202ENST00000517955 RGS17Q9UGC6 210 aaPredicted RBP15.07■□□□□ 0
ARFGEF1-202ENST00000517955 CCDC9Q9Y3X0 531 aaKnown RBP15.07■□□□□ 0
ARFGEF1-202ENST00000517955 RBM6P78332 1123 aaKnown RBP15.06■□□□□ 0
ARFGEF1-202ENST00000517955 AKAP4Q5JQC9 854 aa15.06■□□□□ 0
ARFGEF1-202ENST00000517955 CLEC11AQ9Y240 323 aa15.06■□□□□ 0
ARFGEF1-202ENST00000517955 EXOC5O00471 708 aa15.05■□□□□ -0
ARFGEF1-202ENST00000517955 FXR2P51116 673 aaKnown RBP eCLIP15.05■□□□□ -0
ARFGEF1-202ENST00000517955 RIPK4P57078 832 aa15.05■□□□□ -0
ARFGEF1-202ENST00000517955 LMOD3Q0VAK6 560 aa15.05■□□□□ -0
ARFGEF1-202ENST00000517955 NKX1-1Q15270 411 aaPredicted RBP15.05■□□□□ -0
ARFGEF1-202ENST00000517955 PCDH11XQ9BZA7 1347 aa15.05■□□□□ -0
ARFGEF1-202ENST00000517955 PCDH11YQ9BZA8 1340 aa15.05■□□□□ -0
ARFGEF1-202ENST00000517955 TNS2Q63HR2 1409 aa15.05■□□□□ -0
ARFGEF1-202ENST00000517955 SHANK3Q9BYB0 1731 aa15.05■□□□□ -0
ARFGEF1-202ENST00000517955 DLG5Q8TDM6 1919 aa15.05■□□□□ -0
ARFGEF1-202ENST00000517955 ZNF521Q96K83 1311 aa15.04■□□□□ -0
ARFGEF1-202ENST00000517955 GNAT3A8MTJ3 354 aa15.04■□□□□ -0
ARFGEF1-202ENST00000517955 HSP90AB1P08238 724 aaKnown RBP15.04■□□□□ -0
ARFGEF1-202ENST00000517955 FAM98CQ17RN3 349 aaKnown RBP15.04■□□□□ -0
ARFGEF1-202ENST00000517955 IFNL2Q8IZJ0 200 aa15.04■□□□□ -0
ARFGEF1-202ENST00000517955 PIP4P2Q8N4L2 257 aa15.04■□□□□ -0
ARFGEF1-202ENST00000517955 TRIM35Q9UPQ4 493 aa15.04■□□□□ -0
ARFGEF1-202ENST00000517955 ADAMTS7Q9UKP4 1686 aa15.03■□□□□ -0
ARFGEF1-202ENST00000517955 MAP3K5Q99683 1374 aa15.03■□□□□ -0
ARFGEF1-202ENST00000517955 ZBED9Q6R2W3 1325 aa15.03■□□□□ -0
ARFGEF1-202ENST00000517955 CYP27B1O15528 508 aa15.03■□□□□ -0
ARFGEF1-202ENST00000517955 PHKG2P15735 406 aa15.03■□□□□ -0
ARFGEF1-202ENST00000517955 HNRNPUQ00839 825 aaKnown RBP eCLIP15.03■□□□□ -0
ARFGEF1-202ENST00000517955 DDB1Q16531 1140 aa15.03■□□□□ -0
ARFGEF1-202ENST00000517955 ZNF530Q6P9A1 599 aaPredicted RBP15.03■□□□□ -0
ARFGEF1-202ENST00000517955 LRRC37A3O60309 1634 aa15.03■□□□□ -0
ARFGEF1-202ENST00000517955 C1orf141Q5JVX7 400 aa15.02■□□□□ -0
ARFGEF1-202ENST00000517955 WWC1Q8IX03 1113 aa15.02■□□□□ -0
ARFGEF1-202ENST00000517955 CEMIPQ8WUJ3 1361 aa15.01□□□□□ -0.01
ARFGEF1-202ENST00000517955 RXRBP28702 533 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms