RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 GPBP1L1Q9HC44 474 aaPredicted RBP6.03□□□□□ -1.44
CPNE3-204ENST00000517862 TIMELESSQ9UNS1 1208 aa6.03□□□□□ -1.44
CPNE3-204ENST00000517862 REREQ9P2R6 1566 aa6.02□□□□□ -1.45
CPNE3-204ENST00000517862 ATRNO75882 1429 aa6.02□□□□□ -1.45
CPNE3-204ENST00000517862 CLTCQ00610 1675 aaKnown RBP6.02□□□□□ -1.45
CPNE3-204ENST00000517862 GTPBP6O43824 516 aaPredicted RBP6.02□□□□□ -1.45
CPNE3-204ENST00000517862 AHDC1Q5TGY3 1603 aaPredicted RBP6.01□□□□□ -1.45
CPNE3-204ENST00000517862 HSPA1AP0DMV8 641 aaKnown RBP6.01□□□□□ -1.45
CPNE3-204ENST00000517862 HSPA1BP0DMV9 641 aaKnown RBP6.01□□□□□ -1.45
CPNE3-204ENST00000517862 SWT1Q5T5J6 900 aaKnown RBP6.01□□□□□ -1.45
CPNE3-204ENST00000517862 THEMISQ8N1K5 641 aaPredicted RBP6.01□□□□□ -1.45
CPNE3-204ENST00000517862 GALNT6Q8NCL4 622 aa6.01□□□□□ -1.45
CPNE3-204ENST00000517862 WDR90Q96KV7 1748 aa6.01□□□□□ -1.45
CPNE3-204ENST00000517862 ARHGAP23Q9P227 1491 aa6.01□□□□□ -1.45
CPNE3-204ENST00000517862 DIP2AQ14689 1571 aa6.01□□□□□ -1.45
CPNE3-204ENST00000517862 DIP2CQ9Y2E4 1556 aa6.01□□□□□ -1.45
CPNE3-204ENST00000517862 CUL9Q8IWT3 2517 aa6□□□□□ -1.45
CPNE3-204ENST00000517862 TULP1O00294 542 aaPredicted RBP6□□□□□ -1.45
CPNE3-204ENST00000517862 PDE4AP27815 886 aa6□□□□□ -1.45
CPNE3-204ENST00000517862 PRSS12P56730 875 aa6□□□□□ -1.45
CPNE3-204ENST00000517862 MSH6P52701 1360 aa6□□□□□ -1.45
CPNE3-204ENST00000517862 MAP3K1Q13233 1512 aa5.99□□□□□ -1.45
CPNE3-204ENST00000517862 SPHKAPQ2M3C7 1700 aa5.99□□□□□ -1.45
CPNE3-204ENST00000517862 CACNA1AO00555 2505 aa5.99□□□□□ -1.45
CPNE3-204ENST00000517862 TNRC18O15417 2968 aaPredicted RBP5.99□□□□□ -1.45
CPNE3-204ENST00000517862 ZC3H13Q5T200 1668 aaKnown RBP5.99□□□□□ -1.45
CPNE3-204ENST00000517862 RGS19P49795 217 aa5.99□□□□□ -1.45
CPNE3-204ENST00000517862 GPR162Q16538 588 aa5.99□□□□□ -1.45
CPNE3-204ENST00000517862 HPS1Q92902 700 aa5.99□□□□□ -1.45
CPNE3-204ENST00000517862 SPOCK3Q9BQ16 436 aa5.99□□□□□ -1.45
CPNE3-204ENST00000517862 SYT17Q9BSW7 474 aa5.99□□□□□ -1.45
CPNE3-204ENST00000517862 ATP10DQ9P241 1426 aa5.99□□□□□ -1.45
CPNE3-204ENST00000517862 NRKQ7Z2Y5 1582 aa5.98□□□□□ -1.45
CPNE3-204ENST00000517862 J3QL48 77 aa5.98□□□□□ -1.45
CPNE3-204ENST00000517862 EZH2Q15910 746 aaKnown RBP5.98□□□□□ -1.45
CPNE3-204ENST00000517862 PROSER2Q86WR7 435 aaPredicted RBP5.98□□□□□ -1.45
CPNE3-204ENST00000517862 GJD4Q96KN9 370 aaPredicted RBP5.98□□□□□ -1.45
CPNE3-204ENST00000517862 PLCH2O75038 1416 aa5.98□□□□□ -1.45
CPNE3-204ENST00000517862 MAP3K7O43318 606 aa5.97□□□□□ -1.45
CPNE3-204ENST00000517862 HTRA3P83110 453 aa5.97□□□□□ -1.45
CPNE3-204ENST00000517862 NUDT18Q6ZVK8 323 aa5.97□□□□□ -1.45
CPNE3-204ENST00000517862 ZNF526Q8TF50 670 aaPredicted RBP5.97□□□□□ -1.45
CPNE3-204ENST00000517862 FHDC1Q9C0D6 1143 aaPredicted RBP5.97□□□□□ -1.45
CPNE3-204ENST00000517862 FAM198AQ9UFP1 575 aa5.97□□□□□ -1.45
CPNE3-204ENST00000517862 ATP7AQ04656 1500 aa5.97□□□□□ -1.45
CPNE3-204ENST00000517862 ABCA6Q8N139 1617 aa5.96□□□□□ -1.45
CPNE3-204ENST00000517862 FAM135AQ9P2D6 1515 aa5.96□□□□□ -1.46
CPNE3-204ENST00000517862 MYOM1P52179 1685 aa5.96□□□□□ -1.46
CPNE3-204ENST00000517862 C3orf80F5H4A9 247 aa5.96□□□□□ -1.46
CPNE3-204ENST00000517862 WNT7AO00755 349 aa5.96□□□□□ -1.46
CPNE3-204ENST00000517862 MARSP56192 900 aaKnown RBP5.96□□□□□ -1.46
CPNE3-204ENST00000517862 FNBP4Q8N3X1 1017 aaPredicted RBP5.96□□□□□ -1.46
CPNE3-204ENST00000517862 SCARF2Q96GP6 870 aaPredicted RBP5.96□□□□□ -1.46
CPNE3-204ENST00000517862 RYDENQ9NUL5 291 aaKnown RBP5.96□□□□□ -1.46
CPNE3-204ENST00000517862 TIAM1Q13009 1591 aa5.96□□□□□ -1.46
CPNE3-204ENST00000517862 RGPD1P0DJD0 1748 aa5.96□□□□□ -1.46
CPNE3-204ENST00000517862 DLC1Q96QB1 1528 aa5.95□□□□□ -1.46
CPNE3-204ENST00000517862 UGGT2Q9NYU1 1516 aa5.95□□□□□ -1.46
CPNE3-204ENST00000517862 NR1I2O75469 434 aa5.95□□□□□ -1.46
CPNE3-204ENST00000517862 TSR1Q2NL82 804 aaKnown RBP5.95□□□□□ -1.46
CPNE3-204ENST00000517862 NBPF8Q3BBV2 869 aa5.95□□□□□ -1.46
CPNE3-204ENST00000517862 PLA2G4EQ3MJ16 856 aa5.95□□□□□ -1.46
CPNE3-204ENST00000517862 LCE1DQ5T752 114 aa5.95□□□□□ -1.46
CPNE3-204ENST00000517862 NBPF14Q5TI25 921 aa5.95□□□□□ -1.46
CPNE3-204ENST00000517862 ABHD8Q96I13 439 aa5.95□□□□□ -1.46
CPNE3-204ENST00000517862 CCDC85CA6NKD9 419 aa5.94□□□□□ -1.46
CPNE3-204ENST00000517862 BMP1P13497 986 aa5.94□□□□□ -1.46
CPNE3-204ENST00000517862 SVOPQ8N4V2 548 aa5.94□□□□□ -1.46
CPNE3-204ENST00000517862 DDX27Q96GQ7 796 aaKnown RBP5.94□□□□□ -1.46
CPNE3-204ENST00000517862 GTF3C3Q9Y5Q9 886 aa5.94□□□□□ -1.46
CPNE3-204ENST00000517862 ZNF518AQ6AHZ1 1483 aa5.94□□□□□ -1.46
CPNE3-204ENST00000517862 UGGT1Q9NYU2 1555 aa5.93□□□□□ -1.46
CPNE3-204ENST00000517862 ZBTB24O43167 697 aaPredicted RBP5.93□□□□□ -1.46
CPNE3-204ENST00000517862 KRT27Q7Z3Y8 459 aa5.93□□□□□ -1.46
CPNE3-204ENST00000517862 KRTAP19-1Q8IUB9 90 aa5.93□□□□□ -1.46
CPNE3-204ENST00000517862 AFAP1Q8N556 730 aa5.93□□□□□ -1.46
CPNE3-204ENST00000517862 GOLGA2P5Q9HBQ8 144 aa5.93□□□□□ -1.46
CPNE3-204ENST00000517862 EMILIN3Q9NT22 766 aa5.93□□□□□ -1.46
CPNE3-204ENST00000517862 A2MP01023 1474 aa5.93□□□□□ -1.46
CPNE3-204ENST00000517862 CAMSAP2Q08AD1 1489 aa5.93□□□□□ -1.46
CPNE3-204ENST00000517862 ABCC3O15438 1527 aa5.93□□□□□ -1.46
CPNE3-204ENST00000517862 TNRQ92752 1358 aa5.93□□□□□ -1.46
CPNE3-204ENST00000517862 BIVM-ERCC5R4GMW8 1640 aa5.92□□□□□ -1.46
CPNE3-204ENST00000517862 KDM5AP29375 1690 aaKnown RBP5.92□□□□□ -1.46
CPNE3-204ENST00000517862 GOLGB1Q14789 3259 aaKnown RBP5.92□□□□□ -1.46
CPNE3-204ENST00000517862 KMT5BQ4FZB7 885 aa5.92□□□□□ -1.46
CPNE3-204ENST00000517862 TRIM46Q7Z4K8 759 aa5.92□□□□□ -1.46
CPNE3-204ENST00000517862 SEPT12Q8IYM1 358 aa5.92□□□□□ -1.46
CPNE3-204ENST00000517862 LRRC59Q96AG4 307 aaKnown RBP5.92□□□□□ -1.46
CPNE3-204ENST00000517862 FCF1Q9Y324 198 aaKnown RBP5.92□□□□□ -1.46
CPNE3-204ENST00000517862 DISP2A7MBM2 1401 aa5.91□□□□□ -1.46
CPNE3-204ENST00000517862 SETD5Q9C0A6 1442 aa5.91□□□□□ -1.46
CPNE3-204ENST00000517862 CAMKK2Q96RR4 588 aa5.91□□□□□ -1.46
CPNE3-204ENST00000517862 A0A0C4DFX4 3053 aa5.91□□□□□ -1.46
CPNE3-204ENST00000517862 PNPLA6Q8IY17 1366 aa5.91□□□□□ -1.46
CPNE3-204ENST00000517862 PRDM15P57071 1507 aaPredicted RBP5.9□□□□□ -1.46
CPNE3-204ENST00000517862 MRGPRX2Q96LB1 330 aa5.9□□□□□ -1.46
CPNE3-204ENST00000517862 GLI3P10071 1580 aa5.89□□□□□ -1.47
CPNE3-204ENST00000517862 ACTN4O43707 911 aaKnown RBP5.89□□□□□ -1.47
CPNE3-204ENST00000517862 PROCP04070 461 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms