RNA–Protein interactions for RNA: ENST00000517785.1

LINC00535-202, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 264 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-202ENST00000517785 NRKQ7Z2Y5 1582 aa8.67□□□□□ -1.02
LINC00535-202ENST00000517785 SPATA31A5Q5VU36 1347 aa8.66□□□□□ -1.02
LINC00535-202ENST00000517785 SPATA31A7Q8IWB4 1347 aa8.66□□□□□ -1.02
LINC00535-202ENST00000517785 TK2O00142 265 aa8.66□□□□□ -1.02
LINC00535-202ENST00000517785 NBPF8Q3BBV2 869 aa8.66□□□□□ -1.02
LINC00535-202ENST00000517785 PPP1R15BQ5SWA1 713 aa8.66□□□□□ -1.02
LINC00535-202ENST00000517785 NBPF14Q5TI25 921 aa8.66□□□□□ -1.02
LINC00535-202ENST00000517785 CHD4Q14839 1912 aa8.66□□□□□ -1.02
LINC00535-202ENST00000517785 PPLO60437 1756 aa8.66□□□□□ -1.02
LINC00535-202ENST00000517785 COL14A1Q05707 1796 aaKnown RBP8.66□□□□□ -1.02
LINC00535-202ENST00000517785 IFT172Q9UG01 1749 aa8.66□□□□□ -1.02
LINC00535-202ENST00000517785 HRO43593 1189 aa8.65□□□□□ -1.02
LINC00535-202ENST00000517785 PSME1Q06323 249 aa8.65□□□□□ -1.02
LINC00535-202ENST00000517785 MYOM1P52179 1685 aa8.65□□□□□ -1.03
LINC00535-202ENST00000517785 CEP350Q5VT06 3117 aa8.65□□□□□ -1.03
LINC00535-202ENST00000517785 ARHGEF10O15013 1369 aa8.64□□□□□ -1.03
LINC00535-202ENST00000517785 GTPBP6O43824 516 aaPredicted RBP8.64□□□□□ -1.03
LINC00535-202ENST00000517785 FAM196AQ6ZSG2 479 aa8.64□□□□□ -1.03
LINC00535-202ENST00000517785 SBNO1A3KN83 1393 aa8.63□□□□□ -1.03
LINC00535-202ENST00000517785 ROCK1Q13464 1354 aa8.63□□□□□ -1.03
LINC00535-202ENST00000517785 PARD3Q8TEW0 1356 aa8.63□□□□□ -1.03
LINC00535-202ENST00000517785 PDE4AP27815 886 aa8.63□□□□□ -1.03
LINC00535-202ENST00000517785 TMEM132EQ6IEE7 984 aa8.63□□□□□ -1.03
LINC00535-202ENST00000517785 PMFBP1Q8TBY8 1022 aa8.63□□□□□ -1.03
LINC00535-202ENST00000517785 PDGFDQ9GZP0 370 aaPredicted RBP8.63□□□□□ -1.03
LINC00535-202ENST00000517785 USP35Q9P2H5 1018 aa8.63□□□□□ -1.03
LINC00535-202ENST00000517785 ZBTB7AO95365 584 aa8.62□□□□□ -1.03
LINC00535-202ENST00000517785 STRN4Q9NRL3 753 aa8.62□□□□□ -1.03
LINC00535-202ENST00000517785 KNDC1Q76NI1 1749 aa8.62□□□□□ -1.03
LINC00535-202ENST00000517785 NRXN1Q9ULB1 1477 aa8.62□□□□□ -1.03
LINC00535-202ENST00000517785 TECPR2O15040 1411 aa8.62□□□□□ -1.03
LINC00535-202ENST00000517785 ADGRF5Q8IZF2 1346 aa8.61□□□□□ -1.03
LINC00535-202ENST00000517785 TRPM3Q9HCF6 1732 aaPredicted RBP8.61□□□□□ -1.03
LINC00535-202ENST00000517785 SAFB2Q14151 953 aaKnown RBP eCLIP8.61□□□□□ -1.03
LINC00535-202ENST00000517785 CHRNA2Q15822 529 aa8.61□□□□□ -1.03
LINC00535-202ENST00000517785 KCNK17Q96T54 332 aa8.61□□□□□ -1.03
LINC00535-202ENST00000517785 ANO8Q9HCE9 1232 aaPredicted RBP8.61□□□□□ -1.03
LINC00535-202ENST00000517785 PRDM11Q9NQV5 511 aa8.61□□□□□ -1.03
LINC00535-202ENST00000517785 HCSTQ9UBK5 93 aa8.61□□□□□ -1.03
LINC00535-202ENST00000517785 CASZ1Q86V15 1759 aa8.61□□□□□ -1.03
LINC00535-202ENST00000517785 SPATA31A1Q5TZJ5 1347 aa8.6□□□□□ -1.03
LINC00535-202ENST00000517785 ZNF454Q8N9F8 522 aa8.6□□□□□ -1.03
LINC00535-202ENST00000517785 RRBP1Q9P2E9 1410 aaKnown RBP8.6□□□□□ -1.03
LINC00535-202ENST00000517785 ALS2Q96Q42 1657 aa8.59□□□□□ -1.03
LINC00535-202ENST00000517785 GIGYF1O75420 1035 aaPredicted RBP8.59□□□□□ -1.03
LINC00535-202ENST00000517785 PDE3BQ13370 1112 aa8.59□□□□□ -1.03
LINC00535-202ENST00000517785 FHDC1Q9C0D6 1143 aaPredicted RBP8.59□□□□□ -1.03
LINC00535-202ENST00000517785 CRYBG1Q9Y4K1 1723 aa8.59□□□□□ -1.03
LINC00535-202ENST00000517785 RPGRIP1LQ68CZ1 1315 aa8.58□□□□□ -1.04
LINC00535-202ENST00000517785 LARP6Q9BRS8 491 aaKnown RBP8.58□□□□□ -1.04
LINC00535-202ENST00000517785 KIAA0232Q92628 1395 aa8.58□□□□□ -1.04
LINC00535-202ENST00000517785 ABCC11Q96J66 1382 aa8.58□□□□□ -1.04
LINC00535-202ENST00000517785 YTHDC2Q9H6S0 1430 aaKnown RBP8.57□□□□□ -1.04
LINC00535-202ENST00000517785 FOSBP53539 338 aa8.57□□□□□ -1.04
LINC00535-202ENST00000517785 RGL3Q3MIN7 710 aa8.57□□□□□ -1.04
LINC00535-202ENST00000517785 SYT17Q9BSW7 474 aa8.57□□□□□ -1.04
LINC00535-202ENST00000517785 BCL2L12Q9HB09 334 aa8.57□□□□□ -1.04
LINC00535-202ENST00000517785 GOLGB1Q14789 3259 aaKnown RBP8.57□□□□□ -1.04
LINC00535-202ENST00000517785 ZC3H6P61129 1189 aaKnown RBP8.56□□□□□ -1.04
LINC00535-202ENST00000517785 MFSD10Q14728 455 aa8.56□□□□□ -1.04
LINC00535-202ENST00000517785 DDX27Q96GQ7 796 aaKnown RBP8.56□□□□□ -1.04
LINC00535-202ENST00000517785 PLA2G2EQ9NZK7 142 aa8.56□□□□□ -1.04
LINC00535-202ENST00000517785 VPS9D1Q9Y2B5 631 aa8.56□□□□□ -1.04
LINC00535-202ENST00000517785 EVI5O60447 810 aa8.55□□□□□ -1.04
LINC00535-202ENST00000517785 NUTM2GQ5VZR2 741 aa8.55□□□□□ -1.04
LINC00535-202ENST00000517785 PTF1AQ7RTS3 328 aa8.55□□□□□ -1.04
LINC00535-202ENST00000517785 KCTD12Q96CX2 325 aaKnown RBP8.55□□□□□ -1.04
LINC00535-202ENST00000517785 GPRASP1Q5JY77 1395 aa8.55□□□□□ -1.04
LINC00535-202ENST00000517785 SSH2Q76I76 1423 aa8.54□□□□□ -1.04
LINC00535-202ENST00000517785 PHRF1Q9P1Y6 1649 aaKnown RBP8.54□□□□□ -1.04
LINC00535-202ENST00000517785 SBF2Q86WG5 1849 aa8.54□□□□□ -1.04
LINC00535-202ENST00000517785 EVA1CP58658 441 aa8.54□□□□□ -1.04
LINC00535-202ENST00000517785 LARP1Q6PKG0 1096 aaKnown RBP8.54□□□□□ -1.04
LINC00535-202ENST00000517785 STAC3Q96MF2 364 aa8.54□□□□□ -1.04
LINC00535-202ENST00000517785 PRAM1Q96QH2 718 aa8.54□□□□□ -1.04
LINC00535-202ENST00000517785 HIRIP3Q9BW71 556 aaPredicted RBP8.54□□□□□ -1.04
LINC00535-202ENST00000517785 SLC4A5Q9BY07 1137 aa8.54□□□□□ -1.04
LINC00535-202ENST00000517785 DLC1Q96QB1 1528 aa8.54□□□□□ -1.04
LINC00535-202ENST00000517785 ACIN1Q9UKV3 1341 aaKnown RBP8.54□□□□□ -1.04
LINC00535-202ENST00000517785 PTPREP23469 700 aa8.53□□□□□ -1.04
LINC00535-202ENST00000517785 GPR162Q16538 588 aa8.53□□□□□ -1.04
LINC00535-202ENST00000517785 SHANK3Q9BYB0 1731 aa8.53□□□□□ -1.04
LINC00535-202ENST00000517785 RGPD3A6NKT7 1758 aaPredicted RBP8.53□□□□□ -1.04
LINC00535-202ENST00000517785 RGPD4Q7Z3J3 1758 aa8.53□□□□□ -1.04
LINC00535-202ENST00000517785 BARGINQ6ZT62 677 aa8.52□□□□□ -1.05
LINC00535-202ENST00000517785 TCP11L2Q8N4U5 519 aa8.52□□□□□ -1.05
LINC00535-202ENST00000517785 NGDNQ8NEJ9 315 aaKnown RBP8.52□□□□□ -1.05
LINC00535-202ENST00000517785 PIK3C2GO75747 1445 aa8.52□□□□□ -1.05
LINC00535-202ENST00000517785 ANKARQ7Z5J8 1434 aa8.52□□□□□ -1.05
LINC00535-202ENST00000517785 PRR36Q9H6K5 1346 aa8.52□□□□□ -1.05
LINC00535-202ENST00000517785 PEAK1Q9H792 1746 aa8.51□□□□□ -1.05
LINC00535-202ENST00000517785 PARP4Q9UKK3 1724 aaKnown RBP8.51□□□□□ -1.05
LINC00535-202ENST00000517785 PPARGC1BQ86YN6 1023 aaKnown RBP8.51□□□□□ -1.05
LINC00535-202ENST00000517785 EMILIN3Q9NT22 766 aa8.51□□□□□ -1.05
LINC00535-202ENST00000517785 STK32BQ9NY57 414 aa8.51□□□□□ -1.05
LINC00535-202ENST00000517785 POGKQ9P215 609 aa8.51□□□□□ -1.05
LINC00535-202ENST00000517785 OVOS2A0A0G2JMS6 1433 aa8.51□□□□□ -1.05
LINC00535-202ENST00000517785 OVOS2A0A0J9YW53 1432 aa8.51□□□□□ -1.05
LINC00535-202ENST00000517785 OVOS2Q6IE36 1432 aa8.51□□□□□ -1.05
LINC00535-202ENST00000517785 MINK1Q8N4C8 1332 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms