RNA–Protein interactions for RNA: ENST00000517656.5

CTNNA1-204, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-204ENST00000517656 LRRC4BQ9NT99 713 aa11.75□□□□□ -0.53
CTNNA1-204ENST00000517656 CGNL1Q0VF96 1302 aa11.75□□□□□ -0.53
CTNNA1-204ENST00000517656 CLSPNQ9HAW4 1339 aa11.75□□□□□ -0.53
CTNNA1-204ENST00000517656 KIF24Q5T7B8 1368 aa11.75□□□□□ -0.53
CTNNA1-204ENST00000517656 NPM3O75607 178 aaKnown RBP11.74□□□□□ -0.53
CTNNA1-204ENST00000517656 PRIM1P49642 420 aaKnown RBP11.74□□□□□ -0.53
CTNNA1-204ENST00000517656 ZNF827Q17R98 1081 aa11.74□□□□□ -0.53
CTNNA1-204ENST00000517656 SGIP1Q9BQI5 828 aa11.74□□□□□ -0.53
CTNNA1-204ENST00000517656 CARD14Q9BXL6 1004 aa11.74□□□□□ -0.53
CTNNA1-204ENST00000517656 NSD2O96028 1365 aa11.74□□□□□ -0.53
CTNNA1-204ENST00000517656 INSRP06213 1382 aa11.74□□□□□ -0.53
CTNNA1-204ENST00000517656 FLT4P35916 1363 aa11.74□□□□□ -0.53
CTNNA1-204ENST00000517656 MYOM1P52179 1685 aa11.74□□□□□ -0.53
CTNNA1-204ENST00000517656 HSP90AB2PQ58FF8 381 aa11.73□□□□□ -0.53
CTNNA1-204ENST00000517656 RAPGEF4Q8WZA2 1011 aa11.73□□□□□ -0.53
CTNNA1-204ENST00000517656 AKT1S1Q96B36 256 aa11.73□□□□□ -0.53
CTNNA1-204ENST00000517656 SYTL4Q96C24 671 aaPredicted RBP11.73□□□□□ -0.53
CTNNA1-204ENST00000517656 NSD3Q9BZ95 1437 aa11.73□□□□□ -0.53
CTNNA1-204ENST00000517656 SHANK3Q9BYB0 1731 aa11.72□□□□□ -0.53
CTNNA1-204ENST00000517656 YY1P25490 414 aa11.72□□□□□ -0.53
CTNNA1-204ENST00000517656 USHBP1Q8N6Y0 703 aa11.72□□□□□ -0.53
CTNNA1-204ENST00000517656 KIF20BQ96Q89 1820 aa11.72□□□□□ -0.53
CTNNA1-204ENST00000517656 RGPD2P0DJD1 1756 aa11.72□□□□□ -0.53
CTNNA1-204ENST00000517656 DOT1LQ8TEK3 1739 aa11.72□□□□□ -0.53
CTNNA1-204ENST00000517656 TATP17735 454 aaPredicted RBP11.71□□□□□ -0.53
CTNNA1-204ENST00000517656 SYT17Q9BSW7 474 aa11.71□□□□□ -0.53
CTNNA1-204ENST00000517656 FHDC1Q9C0D6 1143 aaPredicted RBP11.71□□□□□ -0.53
CTNNA1-204ENST00000517656 SLC16A10Q8TF71 515 aa11.7□□□□□ -0.54
CTNNA1-204ENST00000517656 ARXQ96QS3 562 aa11.7□□□□□ -0.54
CTNNA1-204ENST00000517656 EMILIN1Q9Y6C2 1016 aa11.7□□□□□ -0.54
CTNNA1-204ENST00000517656 MAP3K5Q99683 1374 aa11.69□□□□□ -0.54
CTNNA1-204ENST00000517656 PNPLA7Q6ZV29 1317 aa11.69□□□□□ -0.54
CTNNA1-204ENST00000517656 PCDH11XQ9BZA7 1347 aa11.69□□□□□ -0.54
CTNNA1-204ENST00000517656 PCDH11YQ9BZA8 1340 aa11.69□□□□□ -0.54
CTNNA1-204ENST00000517656 PCGF6Q9BYE7 350 aa11.69□□□□□ -0.54
CTNNA1-204ENST00000517656 NCAPD2Q15021 1401 aa11.69□□□□□ -0.54
CTNNA1-204ENST00000517656 KCNQ4P56696 695 aa11.68□□□□□ -0.54
CTNNA1-204ENST00000517656 TFCP2L1Q9NZI6 479 aa11.68□□□□□ -0.54
CTNNA1-204ENST00000517656 CCNL1Q9UK58 526 aaPredicted RBP11.68□□□□□ -0.54
CTNNA1-204ENST00000517656 LY75O60449 1722 aa11.68□□□□□ -0.54
CTNNA1-204ENST00000517656 QSER1Q2KHR3 1735 aa11.68□□□□□ -0.54
CTNNA1-204ENST00000517656 WASHC2AQ641Q2 1341 aa11.67□□□□□ -0.54
CTNNA1-204ENST00000517656 KAT6BQ8WYB5 2073 aa11.67□□□□□ -0.54
CTNNA1-204ENST00000517656 GOLGB1Q14789 3259 aaKnown RBP11.67□□□□□ -0.54
CTNNA1-204ENST00000517656 PPM1GO15355 546 aaPredicted RBP11.66□□□□□ -0.54
CTNNA1-204ENST00000517656 CYP27B1O15528 508 aa11.66□□□□□ -0.54
CTNNA1-204ENST00000517656 POLD1P28340 1107 aa11.66□□□□□ -0.54
CTNNA1-204ENST00000517656 ANKRD26Q9UPS8 1709 aa11.66□□□□□ -0.54
CTNNA1-204ENST00000517656 COL24A1Q17RW2 1714 aa11.64□□□□□ -0.55
CTNNA1-204ENST00000517656 PKD1L3Q7Z443 1732 aa11.64□□□□□ -0.55
CTNNA1-204ENST00000517656 HMGB2P26583 209 aaKnown RBP11.64□□□□□ -0.55
CTNNA1-204ENST00000517656 EIF4G2P78344 907 aaKnown RBP eCLIP11.64□□□□□ -0.55
CTNNA1-204ENST00000517656 MPRIPQ6WCQ1 1025 aa11.64□□□□□ -0.55
CTNNA1-204ENST00000517656 POLR3GLQ9BT43 218 aa11.64□□□□□ -0.55
CTNNA1-204ENST00000517656 POLKQ9UBT6 870 aa11.64□□□□□ -0.55
CTNNA1-204ENST00000517656 PALLDQ8WX93 1383 aa11.64□□□□□ -0.55
CTNNA1-204ENST00000517656 TUBGCP6Q96RT7 1819 aa11.63□□□□□ -0.55
CTNNA1-204ENST00000517656 NKX1-1Q15270 411 aaPredicted RBP11.63□□□□□ -0.55
CTNNA1-204ENST00000517656 EYA1Q99502 592 aa11.63□□□□□ -0.55
CTNNA1-204ENST00000517656 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.63□□□□□ -0.553e-8■□□□□ 11.1
CTNNA1-204ENST00000517656 SPG7Q9UQ90 795 aa11.63□□□□□ -0.55
CTNNA1-204ENST00000517656 HSPA5P11021 654 aaKnown RBP11.62□□□□□ -0.55
CTNNA1-204ENST00000517656 COL23A1Q86Y22 540 aaPredicted RBP11.62□□□□□ -0.55
CTNNA1-204ENST00000517656 SMARCC1Q92922 1105 aaPredicted RBP11.62□□□□□ -0.55
CTNNA1-204ENST00000517656 TOGARAM1Q9Y4F4 1720 aa11.62□□□□□ -0.55
CTNNA1-204ENST00000517656 MSH5O43196 834 aa11.61□□□□□ -0.55
CTNNA1-204ENST00000517656 EIF4A2Q14240 407 aaKnown RBP11.61□□□□□ -0.55
CTNNA1-204ENST00000517656 CNKSR2Q8WXI2 1034 aa11.61□□□□□ -0.55
CTNNA1-204ENST00000517656 PIGBQ92521 554 aa11.61□□□□□ -0.55
CTNNA1-204ENST00000517656 PLEKHG2Q9H7P9 1386 aa11.61□□□□□ -0.55
CTNNA1-204ENST00000517656 C5P01031 1676 aa11.6□□□□□ -0.55
CTNNA1-204ENST00000517656 TNNT2P45379 298 aaPredicted RBP11.6□□□□□ -0.55
CTNNA1-204ENST00000517656 KLHL34Q8N239 644 aa11.6□□□□□ -0.55
CTNNA1-204ENST00000517656 FLAD1Q8NFF5 587 aa11.6□□□□□ -0.55
CTNNA1-204ENST00000517656 PANK3Q9H999 370 aa11.6□□□□□ -0.55
CTNNA1-204ENST00000517656 PHKG2P15735 406 aa11.59□□□□□ -0.55
CTNNA1-204ENST00000517656 GPR162Q16538 588 aa11.59□□□□□ -0.55
CTNNA1-204ENST00000517656 IFNL2Q8IZJ0 200 aa11.59□□□□□ -0.55
CTNNA1-204ENST00000517656 ZNF784Q8NCA9 323 aaPredicted RBP11.59□□□□□ -0.55
CTNNA1-204ENST00000517656 CCER1Q8TC90 406 aaPredicted RBP11.59□□□□□ -0.55
CTNNA1-204ENST00000517656 IGSF1Q8N6C5 1336 aa11.59□□□□□ -0.55
CTNNA1-204ENST00000517656 MAP2P11137 1827 aaKnown RBP11.58□□□□□ -0.56
CTNNA1-204ENST00000517656 NLGN2Q8NFZ4 835 aa11.58□□□□□ -0.56
CTNNA1-204ENST00000517656 AK7Q96M32 723 aa11.58□□□□□ -0.56
CTNNA1-204ENST00000517656 TMOD3Q9NYL9 352 aa11.58□□□□□ -0.56
CTNNA1-204ENST00000517656 C4BP0C0L5 1744 aa11.57□□□□□ -0.56
CTNNA1-204ENST00000517656 LOC102724428A0A0B4J2F2 783 aa11.57□□□□□ -0.56
CTNNA1-204ENST00000517656 SIK1P57059 783 aa11.57□□□□□ -0.56
CTNNA1-204ENST00000517656 MSL1Q68DK7 614 aa11.57□□□□□ -0.56
CTNNA1-204ENST00000517656 ITGB4P16144 1822 aa11.57□□□□□ -0.56
CTNNA1-204ENST00000517656 TAF1LQ8IZX4 1826 aa11.56□□□□□ -0.56
CTNNA1-204ENST00000517656 AMIGO3Q86WK7 504 aa11.56□□□□□ -0.56
CTNNA1-204ENST00000517656 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.55□□□□□ -0.56
CTNNA1-204ENST00000517656 SSFA2P28290 1259 aa11.55□□□□□ -0.56
CTNNA1-204ENST00000517656 MORC1Q86VD1 984 aa11.55□□□□□ -0.56
CTNNA1-204ENST00000517656 PELP1Q8IZL8 1130 aaKnown RBP11.55□□□□□ -0.56
CTNNA1-204ENST00000517656 LINC00116Q8NCU8 138 aa11.55□□□□□ -0.56
CTNNA1-204ENST00000517656 ATG3Q9NT62 314 aa11.55□□□□□ -0.56
CTNNA1-204ENST00000517656 ASAP1Q9ULH1 1129 aa11.55□□□□□ -0.56
CTNNA1-204ENST00000517656 ERVV-2B6SEH9 535 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms