RNA–Protein interactions for RNA: ENST00000517619.5

SPIDR-202, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3

Gene SPIDR, Length 335 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-202ENST00000517619 SYTL4Q96C24 671 aaPredicted RBP13.39□□□□□ -0.27
SPIDR-202ENST00000517619 LRRC4BQ9NT99 713 aa13.39□□□□□ -0.27
SPIDR-202ENST00000517619 FHDC1Q9C0D6 1143 aaPredicted RBP13.38□□□□□ -0.27
SPIDR-202ENST00000517619 ANKRD26Q9UPS8 1709 aa13.38□□□□□ -0.27
SPIDR-202ENST00000517619 NSD2O96028 1365 aa13.37□□□□□ -0.27
SPIDR-202ENST00000517619 COL24A1Q17RW2 1714 aa13.37□□□□□ -0.27
SPIDR-202ENST00000517619 USHBP1Q8N6Y0 703 aa13.37□□□□□ -0.27
SPIDR-202ENST00000517619 ZCRB1Q8TBF4 217 aaKnown RBP13.37□□□□□ -0.27
SPIDR-202ENST00000517619 SGIP1Q9BQI5 828 aa13.37□□□□□ -0.27
SPIDR-202ENST00000517619 PRIM1P49642 420 aaKnown RBP13.36□□□□□ -0.27
SPIDR-202ENST00000517619 CDCA8Q53HL2 280 aa13.36□□□□□ -0.27
SPIDR-202ENST00000517619 SLC27A3Q5K4L6 730 aa13.36□□□□□ -0.27
SPIDR-202ENST00000517619 NBPF6Q5VWK0 638 aa13.36□□□□□ -0.27
SPIDR-202ENST00000517619 NBPF4Q96M43 638 aa13.36□□□□□ -0.27
SPIDR-202ENST00000517619 SYT17Q9BSW7 474 aa13.36□□□□□ -0.27
SPIDR-202ENST00000517619 CHD4Q14839 1912 aa13.36□□□□□ -0.27
SPIDR-202ENST00000517619 C5P01031 1676 aa13.36□□□□□ -0.27
SPIDR-202ENST00000517619 FLT4P35916 1363 aa13.35□□□□□ -0.27
SPIDR-202ENST00000517619 KCNQ4P56696 695 aa13.35□□□□□ -0.27
SPIDR-202ENST00000517619 AKT1S1Q96B36 256 aa13.35□□□□□ -0.27
SPIDR-202ENST00000517619 NSD3Q9BZ95 1437 aa13.35□□□□□ -0.27
SPIDR-202ENST00000517619 PKD1L3Q7Z443 1732 aa13.35□□□□□ -0.27
SPIDR-202ENST00000517619 TOGARAM1Q9Y4F4 1720 aa13.35□□□□□ -0.27
SPIDR-202ENST00000517619 MAP2P11137 1827 aaKnown RBP13.34□□□□□ -0.27
SPIDR-202ENST00000517619 ITGB4P16144 1822 aa13.34□□□□□ -0.27
SPIDR-202ENST00000517619 INSRP06213 1382 aa13.34□□□□□ -0.27
SPIDR-202ENST00000517619 HSP90AB2PQ58FF8 381 aa13.34□□□□□ -0.27
SPIDR-202ENST00000517619 RAPGEF4Q8WZA2 1011 aa13.34□□□□□ -0.27
SPIDR-202ENST00000517619 ARXQ96QS3 562 aa13.34□□□□□ -0.27
SPIDR-202ENST00000517619 CGNL1Q0VF96 1302 aa13.34□□□□□ -0.27
SPIDR-202ENST00000517619 PNPLA7Q6ZV29 1317 aa13.34□□□□□ -0.27
SPIDR-202ENST00000517619 TAF1LQ8IZX4 1826 aa13.34□□□□□ -0.27
SPIDR-202ENST00000517619 KIF24Q5T7B8 1368 aa13.33□□□□□ -0.27
SPIDR-202ENST00000517619 GOLGB1Q14789 3259 aaKnown RBP13.32□□□□□ -0.28
SPIDR-202ENST00000517619 TATP17735 454 aaPredicted RBP13.32□□□□□ -0.28
SPIDR-202ENST00000517619 CARD14Q9BXL6 1004 aa13.32□□□□□ -0.28
SPIDR-202ENST00000517619 TFCP2L1Q9NZI6 479 aa13.32□□□□□ -0.28
SPIDR-202ENST00000517619 PCDH11XQ9BZA7 1347 aa13.32□□□□□ -0.28
SPIDR-202ENST00000517619 PCDH11YQ9BZA8 1340 aa13.32□□□□□ -0.28
SPIDR-202ENST00000517619 MAP3K5Q99683 1374 aa13.32□□□□□ -0.28
SPIDR-202ENST00000517619 CCNL1Q9UK58 526 aaPredicted RBP13.31□□□□□ -0.28
SPIDR-202ENST00000517619 EMILIN1Q9Y6C2 1016 aa13.31□□□□□ -0.28
SPIDR-202ENST00000517619 KLHL34Q8N239 644 aa13.3□□□□□ -0.28
SPIDR-202ENST00000517619 SLC16A10Q8TF71 515 aa13.3□□□□□ -0.28
SPIDR-202ENST00000517619 POLD1P28340 1107 aa13.29□□□□□ -0.28
SPIDR-202ENST00000517619 TIMELESSQ9UNS1 1208 aa13.29□□□□□ -0.28
SPIDR-202ENST00000517619 PPM1GO15355 546 aaPredicted RBP13.28□□□□□ -0.28
SPIDR-202ENST00000517619 PCGF6Q9BYE7 350 aa13.28□□□□□ -0.28
SPIDR-202ENST00000517619 NCAPD2Q15021 1401 aa13.28□□□□□ -0.28
SPIDR-202ENST00000517619 C4BP0C0L5 1744 aa13.27□□□□□ -0.28
SPIDR-202ENST00000517619 CYP27B1O15528 508 aa13.27□□□□□ -0.29
SPIDR-202ENST00000517619 MPRIPQ6WCQ1 1025 aa13.27□□□□□ -0.29
SPIDR-202ENST00000517619 POLR3GLQ9BT43 218 aa13.27□□□□□ -0.29
SPIDR-202ENST00000517619 CLSPNQ9HAW4 1339 aa13.27□□□□□ -0.29
SPIDR-202ENST00000517619 PALLDQ8WX93 1383 aa13.27□□□□□ -0.29
SPIDR-202ENST00000517619 MSH5O43196 834 aa13.26□□□□□ -0.29
SPIDR-202ENST00000517619 UBR3Q6ZT12 1888 aa13.26□□□□□ -0.29
SPIDR-202ENST00000517619 COL23A1Q86Y22 540 aaPredicted RBP13.25□□□□□ -0.29
SPIDR-202ENST00000517619 WASHC2AQ641Q2 1341 aa13.24□□□□□ -0.29
SPIDR-202ENST00000517619 GPR162Q16538 588 aa13.24□□□□□ -0.29
SPIDR-202ENST00000517619 ZNF784Q8NCA9 323 aaPredicted RBP13.24□□□□□ -0.29
SPIDR-202ENST00000517619 PELP1Q8IZL8 1130 aaKnown RBP13.23□□□□□ -0.29
SPIDR-202ENST00000517619 NLGN2Q8NFZ4 835 aa13.23□□□□□ -0.29
SPIDR-202ENST00000517619 TNNT2P45379 298 aaPredicted RBP13.22□□□□□ -0.29
SPIDR-202ENST00000517619 MSL1Q68DK7 614 aa13.22□□□□□ -0.29
SPIDR-202ENST00000517619 EYA1Q99502 592 aa13.22□□□□□ -0.29
SPIDR-202ENST00000517619 POLKQ9UBT6 870 aa13.22□□□□□ -0.29
SPIDR-202ENST00000517619 SPG7Q9UQ90 795 aa13.22□□□□□ -0.29
SPIDR-202ENST00000517619 SMARCC1Q92922 1105 aaPredicted RBP13.21□□□□□ -0.29
SPIDR-202ENST00000517619 EIF4G2P78344 907 aaKnown RBP eCLIP13.2□□□□□ -0.36e-6■■■■□ 25.1
SPIDR-202ENST00000517619 NKX1-1Q15270 411 aaPredicted RBP13.2□□□□□ -0.3
SPIDR-202ENST00000517619 PIGBQ92521 554 aa13.2□□□□□ -0.3
SPIDR-202ENST00000517619 HSPA5P11021 654 aaKnown RBP13.19□□□□□ -0.3
SPIDR-202ENST00000517619 HMGB2P26583 209 aaKnown RBP13.19□□□□□ -0.3
SPIDR-202ENST00000517619 EIF4A2Q14240 407 aaKnown RBP13.19□□□□□ -0.3
SPIDR-202ENST00000517619 AK7Q96M32 723 aa13.19□□□□□ -0.3
SPIDR-202ENST00000517619 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.19□□□□□ -0.3
SPIDR-202ENST00000517619 PHF14O94880 888 aa13.18□□□□□ -0.3
SPIDR-202ENST00000517619 PHKG2P15735 406 aa13.18□□□□□ -0.3
SPIDR-202ENST00000517619 AMIGO3Q86WK7 504 aa13.18□□□□□ -0.3
SPIDR-202ENST00000517619 IFNL2Q8IZJ0 200 aa13.18□□□□□ -0.3
SPIDR-202ENST00000517619 FLAD1Q8NFF5 587 aa13.18□□□□□ -0.3
SPIDR-202ENST00000517619 TMOD3Q9NYL9 352 aa13.18□□□□□ -0.3
SPIDR-202ENST00000517619 COL5A3P25940 1745 aaPredicted RBP13.17□□□□□ -0.3
SPIDR-202ENST00000517619 PANK3Q9H999 370 aa13.17□□□□□ -0.3
SPIDR-202ENST00000517619 ZNF831Q5JPB2 1677 aa13.16□□□□□ -0.3
SPIDR-202ENST00000517619 LOC102724428A0A0B4J2F2 783 aa13.16□□□□□ -0.3
SPIDR-202ENST00000517619 YBX3P16989 372 aaKnown RBP eCLIP13.16□□□□□ -0.3
SPIDR-202ENST00000517619 SIK1P57059 783 aa13.16□□□□□ -0.3
SPIDR-202ENST00000517619 SMIM5Q71RC9 77 aa13.16□□□□□ -0.3
SPIDR-202ENST00000517619 LINC00116Q8NCU8 138 aa13.16□□□□□ -0.3
SPIDR-202ENST00000517619 ASAP1Q9ULH1 1129 aa13.16□□□□□ -0.3
SPIDR-202ENST00000517619 PLEKHG2Q9H7P9 1386 aa13.16□□□□□ -0.3
SPIDR-202ENST00000517619 IGSF1Q8N6C5 1336 aa13.15□□□□□ -0.3
SPIDR-202ENST00000517619 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.15□□□□□ -0.3
SPIDR-202ENST00000517619 CCER1Q8TC90 406 aaPredicted RBP13.15□□□□□ -0.3
SPIDR-202ENST00000517619 SSFA2P28290 1259 aa13.14□□□□□ -0.31
SPIDR-202ENST00000517619 ATP6V1AP38606 617 aa13.14□□□□□ -0.31
SPIDR-202ENST00000517619 ITPK1Q13572 414 aa13.14□□□□□ -0.31
SPIDR-202ENST00000517619 CD2APQ9Y5K6 639 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms