RNA–Protein interactions for RNA: ENST00000517608.5

UBE2W-203, Transcript of ubiquitin conjugating enzyme E2 W, humanhuman

TSL 1 (best) BASIC

Gene UBE2W, Length 8,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2W-203ENST00000517608 SLIT2O94813 1529 aa4.51□□□□□ -1.69
UBE2W-203ENST00000517608 OVOS2A0A0G2JMS6 1433 aa4.51□□□□□ -1.69
UBE2W-203ENST00000517608 DNAJC13O75165 2243 aa4.51□□□□□ -1.69
UBE2W-203ENST00000517608 SALL3Q9BXA9 1300 aa4.51□□□□□ -1.69
UBE2W-203ENST00000517608 MAPK8IP3Q9UPT6 1336 aa4.51□□□□□ -1.69
UBE2W-203ENST00000517608 TPM2P07951 284 aa4.51□□□□□ -1.69
UBE2W-203ENST00000517608 FAM43AQ8N2R8 423 aa4.51□□□□□ -1.69
UBE2W-203ENST00000517608 TRIM35Q9UPQ4 493 aa4.51□□□□□ -1.69
UBE2W-203ENST00000517608 RALGAPA1Q6GYQ0 2036 aa4.51□□□□□ -1.69
UBE2W-203ENST00000517608 SVILO95425 2214 aa4.51□□□□□ -1.69
UBE2W-203ENST00000517608 NPHP4O75161 1426 aaPredicted RBP4.51□□□□□ -1.69
UBE2W-203ENST00000517608 CDK11BP21127 795 aaKnown RBP4.51□□□□□ -1.69
UBE2W-203ENST00000517608 HNRNPUQ00839 825 aaKnown RBP eCLIP4.51□□□□□ -1.69
UBE2W-203ENST00000517608 CHAF1AQ13111 956 aaPredicted RBP4.51□□□□□ -1.69
UBE2W-203ENST00000517608 DCAF11Q8TEB1 546 aa4.51□□□□□ -1.69
UBE2W-203ENST00000517608 SCN3AQ9NY46 2000 aa4.51□□□□□ -1.69
UBE2W-203ENST00000517608 ARHGEF17Q96PE2 2063 aaPredicted RBP4.5□□□□□ -1.69
UBE2W-203ENST00000517608 SKOR2Q2VWA4 1001 aaPredicted RBP4.5□□□□□ -1.69
UBE2W-203ENST00000517608 POLEQ07864 2286 aa4.5□□□□□ -1.69
UBE2W-203ENST00000517608 CSPP1Q1MSJ5 1256 aa4.5□□□□□ -1.69
UBE2W-203ENST00000517608 HIRIP3Q9BW71 556 aaPredicted RBP4.5□□□□□ -1.69
UBE2W-203ENST00000517608 NSD3Q9BZ95 1437 aa4.5□□□□□ -1.69
UBE2W-203ENST00000517608 PLXNB1O43157 2135 aa4.5□□□□□ -1.69
UBE2W-203ENST00000517608 DOCK7Q96N67 2140 aa4.5□□□□□ -1.69
UBE2W-203ENST00000517608 C1orf167Q5SNV9 1468 aa4.5□□□□□ -1.69
UBE2W-203ENST00000517608 TNS2Q63HR2 1409 aa4.5□□□□□ -1.69
UBE2W-203ENST00000517608 FAM193AP78312 1265 aa4.5□□□□□ -1.69
UBE2W-203ENST00000517608 RALBP1Q15311 655 aa4.5□□□□□ -1.69
UBE2W-203ENST00000517608 TSHZ2Q9NRE2 1034 aa4.5□□□□□ -1.69
UBE2W-203ENST00000517608 LRP6O75581 1613 aa4.5□□□□□ -1.69
UBE2W-203ENST00000517608 CENPJQ9HC77 1338 aaPredicted RBP4.5□□□□□ -1.69
UBE2W-203ENST00000517608 NRDCO43847 1150 aa4.5□□□□□ -1.69
UBE2W-203ENST00000517608 KDM4FA0A1W2PPD8 638 aa4.5□□□□□ -1.69
UBE2W-203ENST00000517608 UBR2Q8IWV8 1755 aa4.5□□□□□ -1.69
UBE2W-203ENST00000517608 IL13P35225 146 aa4.49□□□□□ -1.69
UBE2W-203ENST00000517608 ATAD2Q6PL18 1390 aa4.49□□□□□ -1.69
UBE2W-203ENST00000517608 DDX10Q13206 875 aaKnown RBP4.49□□□□□ -1.69
UBE2W-203ENST00000517608 RTL1A6NKG5 1358 aa4.49□□□□□ -1.69
UBE2W-203ENST00000517608 NOTCH3Q9UM47 2321 aa4.49□□□□□ -1.69
UBE2W-203ENST00000517608 FAM69CQ0P6D2 419 aa4.49□□□□□ -1.69
UBE2W-203ENST00000517608 PDCL2Q8N4E4 241 aa4.49□□□□□ -1.69
UBE2W-203ENST00000517608 TRIM52Q96A61 297 aa4.49□□□□□ -1.69
UBE2W-203ENST00000517608 CHMP4AQ9BY43 222 aa4.49□□□□□ -1.69
UBE2W-203ENST00000517608 CREBBPQ92793 2442 aa4.49□□□□□ -1.69
UBE2W-203ENST00000517608 CANXP27824 592 aaKnown RBP4.49□□□□□ -1.69
UBE2W-203ENST00000517608 IGSF1Q8N6C5 1336 aa4.49□□□□□ -1.69
UBE2W-203ENST00000517608 DOCK10Q96BY6 2186 aa4.49□□□□□ -1.69
UBE2W-203ENST00000517608 CAVIN1Q6NZI2 390 aaKnown RBP4.49□□□□□ -1.69
UBE2W-203ENST00000517608 PDCL3Q9H2J4 239 aa4.49□□□□□ -1.69
UBE2W-203ENST00000517608 COL5A2P05997 1499 aaPredicted RBP4.48□□□□□ -1.69
UBE2W-203ENST00000517608 NLRP13Q86W25 1043 aa4.48□□□□□ -1.69
UBE2W-203ENST00000517608 MYH16Q9H6N6 1097 aa4.48□□□□□ -1.69
UBE2W-203ENST00000517608 PHF3Q92576 2039 aaKnown RBP4.48□□□□□ -1.69
UBE2W-203ENST00000517608 SPTAN1Q13813 2472 aaKnown RBP4.48□□□□□ -1.69
UBE2W-203ENST00000517608 HS1BP3Q53T59 392 aa4.48□□□□□ -1.69
UBE2W-203ENST00000517608 MRS2Q9HD23 443 aa4.48□□□□□ -1.69
UBE2W-203ENST00000517608 MCM3APO60318 1980 aa4.48□□□□□ -1.69
UBE2W-203ENST00000517608 NRAPQ86VF7 1730 aa4.48□□□□□ -1.69
UBE2W-203ENST00000517608 PHF14O94880 888 aa4.48□□□□□ -1.69
UBE2W-203ENST00000517608 CYB5RLQ6IPT4 315 aa4.48□□□□□ -1.69
UBE2W-203ENST00000517608 SLFN5Q08AF3 891 aa4.48□□□□□ -1.69
UBE2W-203ENST00000517608 GSE1Q14687 1217 aa4.48□□□□□ -1.69
UBE2W-203ENST00000517608 MYO16Q9Y6X6 1858 aa4.48□□□□□ -1.69
UBE2W-203ENST00000517608 MCM5P33992 734 aa4.48□□□□□ -1.69
UBE2W-203ENST00000517608 CASZ1Q86V15 1759 aa4.48□□□□□ -1.69
UBE2W-203ENST00000517608 POLKQ9UBT6 870 aa4.48□□□□□ -1.69
UBE2W-203ENST00000517608 CTR9Q6PD62 1173 aa4.47□□□□□ -1.69
UBE2W-203ENST00000517608 KIF20AO95235 890 aa4.47□□□□□ -1.69
UBE2W-203ENST00000517608 TOGARAM1Q9Y4F4 1720 aa4.47□□□□□ -1.69
UBE2W-203ENST00000517608 DDIT3P35638 169 aa4.47□□□□□ -1.69
UBE2W-203ENST00000517608 PANK3Q9H999 370 aa4.47□□□□□ -1.69
UBE2W-203ENST00000517608 MED13LQ71F56 2210 aa4.47□□□□□ -1.69
UBE2W-203ENST00000517608 ITGAEP38570 1179 aa4.47□□□□□ -1.69
UBE2W-203ENST00000517608 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.47□□□□□ -1.69
UBE2W-203ENST00000517608 CPDO75976 1380 aa4.47□□□□□ -1.69
UBE2W-203ENST00000517608 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.47□□□□□ -1.69
UBE2W-203ENST00000517608 DDX11L8A8MPP1 907 aa4.47□□□□□ -1.69
UBE2W-203ENST00000517608 ALPK2Q86TB3 2170 aa4.47□□□□□ -1.69
UBE2W-203ENST00000517608 CCDC66A2RUB6 948 aa4.46□□□□□ -1.69
UBE2W-203ENST00000517608 SYAP1Q96A49 352 aaPredicted RBP4.46□□□□□ -1.69
UBE2W-203ENST00000517608 ASCC3Q8N3C0 2202 aaKnown RBP4.46□□□□□ -1.69
UBE2W-203ENST00000517608 HTATSF1O43719 755 aaKnown RBP4.46□□□□□ -1.7
UBE2W-203ENST00000517608 BCL9O00512 1426 aa4.46□□□□□ -1.7
UBE2W-203ENST00000517608 TMC1Q8TDI8 760 aa4.46□□□□□ -1.7
UBE2W-203ENST00000517608 KIF16BQ96L93 1317 aa4.46□□□□□ -1.7
UBE2W-203ENST00000517608 KCPQ6ZWJ8 1503 aa4.46□□□□□ -1.7
UBE2W-203ENST00000517608 CARD11Q9BXL7 1154 aa4.46□□□□□ -1.7
UBE2W-203ENST00000517608 ZNF777Q9ULD5 760 aaPredicted RBP4.46□□□□□ -1.7
UBE2W-203ENST00000517608 TDRD15B5MCY1 1934 aaKnown RBP4.46□□□□□ -1.7
UBE2W-203ENST00000517608 GBP4Q96PP9 640 aa4.46□□□□□ -1.7
UBE2W-203ENST00000517608 PLEKHG5O94827 1062 aa4.45□□□□□ -1.7
UBE2W-203ENST00000517608 HEATR5BQ9P2D3 2071 aa4.45□□□□□ -1.7
UBE2W-203ENST00000517608 ADAMTS8Q9UP79 889 aa4.45□□□□□ -1.7
UBE2W-203ENST00000517608 KIAA0232Q92628 1395 aa4.45□□□□□ -1.7
UBE2W-203ENST00000517608 ZFC3H1O60293 1989 aaKnown RBP4.45□□□□□ -1.7
UBE2W-203ENST00000517608 MSNP26038 577 aaKnown RBP4.45□□□□□ -1.7
UBE2W-203ENST00000517608 GOLGA6L1Q8N7Z2 621 aa4.45□□□□□ -1.7
UBE2W-203ENST00000517608 NCKAP5LQ9HCH0 1330 aa4.45□□□□□ -1.7
UBE2W-203ENST00000517608 UNC13CQ8NB66 2214 aa4.45□□□□□ -1.7
UBE2W-203ENST00000517608 SLC12A5Q9H2X9 1139 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms