RNA–Protein interactions for RNA: ENST00000517484.5

EFCAB13-203, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EFCAB13, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-203ENST00000517484 JARID2Q92833 1246 aaPredicted RBP12.38□□□□□ -0.43
EFCAB13-203ENST00000517484 DIP2AQ14689 1571 aa12.38□□□□□ -0.43
EFCAB13-203ENST00000517484 PTCH1Q13635 1447 aa12.38□□□□□ -0.43
EFCAB13-203ENST00000517484 VAMP4O75379 141 aa12.38□□□□□ -0.43
EFCAB13-203ENST00000517484 IGHDP01880 384 aa12.38□□□□□ -0.43
EFCAB13-203ENST00000517484 FAM182BQ5T319 152 aa12.38□□□□□ -0.43
EFCAB13-203ENST00000517484 C8orf37Q96NL8 207 aa12.38□□□□□ -0.43
EFCAB13-203ENST00000517484 C1orf167Q5SNV9 1468 aa12.38□□□□□ -0.43
EFCAB13-203ENST00000517484 DLC1Q96QB1 1528 aa12.37□□□□□ -0.43
EFCAB13-203ENST00000517484 ERICH6Q7L0X2 663 aa12.37□□□□□ -0.43
EFCAB13-203ENST00000517484 POLR1AO95602 1720 aaPredicted RBP12.37□□□□□ -0.43
EFCAB13-203ENST00000517484 NGLY1Q96IV0 654 aa12.36□□□□□ -0.43
EFCAB13-203ENST00000517484 RBM42Q9BTD8 480 aaKnown RBP12.36□□□□□ -0.43
EFCAB13-203ENST00000517484 IFT57Q9NWB7 429 aa12.36□□□□□ -0.43
EFCAB13-203ENST00000517484 PCDHB15Q9Y5E8 787 aa12.36□□□□□ -0.43
EFCAB13-203ENST00000517484 TAF7Q15545 349 aaPredicted RBP12.36□□□□□ -0.43
EFCAB13-203ENST00000517484 TTC5Q8N0Z6 440 aa12.36□□□□□ -0.43
EFCAB13-203ENST00000517484 CABP4P57796 275 aa12.35□□□□□ -0.43
EFCAB13-203ENST00000517484 ACSBG1Q96GR2 724 aa12.35□□□□□ -0.43
EFCAB13-203ENST00000517484 CCDC27Q2M243 656 aa12.35□□□□□ -0.43
EFCAB13-203ENST00000517484 MEX3CQ5U5Q3 659 aaKnown RBP12.35□□□□□ -0.43
EFCAB13-203ENST00000517484 LNPKQ9C0E8 428 aa12.35□□□□□ -0.43
EFCAB13-203ENST00000517484 PHAXQ9H814 394 aaKnown RBP12.35□□□□□ -0.43
EFCAB13-203ENST00000517484 AATKQ6ZMQ8 1374 aa12.34□□□□□ -0.43
EFCAB13-203ENST00000517484 PNPLA6Q8IY17 1366 aa12.34□□□□□ -0.43
EFCAB13-203ENST00000517484 TRMT2AQ8IZ69 625 aaKnown RBP12.34□□□□□ -0.43
EFCAB13-203ENST00000517484 SPATA31A3Q5VYP0 1347 aa12.34□□□□□ -0.43
EFCAB13-203ENST00000517484 FAM177BA6PVY3 158 aa12.33□□□□□ -0.44
EFCAB13-203ENST00000517484 TOM1O60784 492 aa12.33□□□□□ -0.44
EFCAB13-203ENST00000517484 ANKRD45Q5TZF3 282 aa12.33□□□□□ -0.44
EFCAB13-203ENST00000517484 MVPQ14764 893 aaKnown RBP12.32□□□□□ -0.44
EFCAB13-203ENST00000517484 IGSF1Q8N6C5 1336 aa12.32□□□□□ -0.44
EFCAB13-203ENST00000517484 SPG7Q9UQ90 795 aa12.32□□□□□ -0.44
EFCAB13-203ENST00000517484 OVOS2A0A0J9YW53 1432 aa12.32□□□□□ -0.44
EFCAB13-203ENST00000517484 OVOS2Q6IE36 1432 aa12.32□□□□□ -0.44
EFCAB13-203ENST00000517484 INSRP06213 1382 aa12.32□□□□□ -0.44
EFCAB13-203ENST00000517484 ERBB3P21860 1342 aa12.32□□□□□ -0.44
EFCAB13-203ENST00000517484 CDC42BPGQ6DT37 1551 aa12.31□□□□□ -0.44
EFCAB13-203ENST00000517484 CHPF2Q9P2E5 772 aa12.31□□□□□ -0.44
EFCAB13-203ENST00000517484 ADAMTSL3P82987 1691 aa12.31□□□□□ -0.44
EFCAB13-203ENST00000517484 CHL1O00533 1208 aa12.31□□□□□ -0.44
EFCAB13-203ENST00000517484 KCNQ4P56696 695 aa12.31□□□□□ -0.44
EFCAB13-203ENST00000517484 ERICH6BQ5W0A0 696 aa12.31□□□□□ -0.44
EFCAB13-203ENST00000517484 KIF16BQ96L93 1317 aa12.3□□□□□ -0.44
EFCAB13-203ENST00000517484 PDE3AQ14432 1141 aa12.3□□□□□ -0.44
EFCAB13-203ENST00000517484 RWDD1Q9H446 243 aaPredicted RBP12.3□□□□□ -0.44
EFCAB13-203ENST00000517484 CHMP3Q9Y3E7 222 aa12.3□□□□□ -0.44
EFCAB13-203ENST00000517484 MRPL50Q8N5N7 158 aaKnown RBP12.3□□□□□ -0.44
EFCAB13-203ENST00000517484 DDX19BQ9UMR2 479 aa12.3□□□□□ -0.44
EFCAB13-203ENST00000517484 ZCRB1Q8TBF4 217 aaKnown RBP12.3□□□□□ -0.44
EFCAB13-203ENST00000517484 ANKARQ7Z5J8 1434 aa12.29□□□□□ -0.44
EFCAB13-203ENST00000517484 RNMTO43148 476 aaKnown RBP12.29□□□□□ -0.44
EFCAB13-203ENST00000517484 CCDC85AQ96PX6 553 aaPredicted RBP12.29□□□□□ -0.44
EFCAB13-203ENST00000517484 PHF23Q9BUL5 403 aaPredicted RBP12.29□□□□□ -0.44
EFCAB13-203ENST00000517484 CCDC30Q5VVM6 783 aa12.29□□□□□ -0.44
EFCAB13-203ENST00000517484 RGPD8O14715 1765 aaPredicted RBP12.29□□□□□ -0.44
EFCAB13-203ENST00000517484 MS4A1P11836 297 aa12.28□□□□□ -0.44
EFCAB13-203ENST00000517484 SLC4A3P48751 1232 aa12.28□□□□□ -0.44
EFCAB13-203ENST00000517484 IFNL2Q8IZJ0 200 aa12.28□□□□□ -0.44
EFCAB13-203ENST00000517484 MEIS3Q99687 375 aa12.28□□□□□ -0.44
EFCAB13-203ENST00000517484 OS9Q13438 667 aaPredicted RBP12.28□□□□□ -0.44
EFCAB13-203ENST00000517484 AMOTQ4VCS5 1084 aa12.28□□□□□ -0.44
EFCAB13-203ENST00000517484 RNF123Q5XPI4 1314 aa12.28□□□□□ -0.44
EFCAB13-203ENST00000517484 USP31Q70CQ4 1352 aa12.28□□□□□ -0.44
EFCAB13-203ENST00000517484 PI4KAP2A4QPH2 592 aa12.28□□□□□ -0.44
EFCAB13-203ENST00000517484 AKAP4Q5JQC9 854 aa12.28□□□□□ -0.44
EFCAB13-203ENST00000517484 PI4KAP1Q8N8J0 262 aa12.28□□□□□ -0.44
EFCAB13-203ENST00000517484 DAXXQ9UER7 740 aaPredicted RBP12.28□□□□□ -0.44
EFCAB13-203ENST00000517484 PDZRN3Q9UPQ7 1066 aa12.28□□□□□ -0.44
EFCAB13-203ENST00000517484 FLIIQ13045 1269 aa12.27□□□□□ -0.44
EFCAB13-203ENST00000517484 RIC3Q7Z5B4 369 aa12.27□□□□□ -0.44
EFCAB13-203ENST00000517484 API5Q9BZZ5 524 aaKnown RBP12.27□□□□□ -0.44
EFCAB13-203ENST00000517484 MST1RQ04912 1400 aa12.27□□□□□ -0.45
EFCAB13-203ENST00000517484 LRRC7Q96NW7 1537 aa12.27□□□□□ -0.45
EFCAB13-203ENST00000517484 ATP5J2-PTCD1G3V325 749 aa12.27□□□□□ -0.45
EFCAB13-203ENST00000517484 CYP27B1O15528 508 aa12.27□□□□□ -0.45
EFCAB13-203ENST00000517484 SMARCA5O60264 1052 aaPredicted RBP12.27□□□□□ -0.45
EFCAB13-203ENST00000517484 FAM98CQ17RN3 349 aaKnown RBP12.27□□□□□ -0.45
EFCAB13-203ENST00000517484 PROSER3Q2NL68 480 aa12.27□□□□□ -0.45
EFCAB13-203ENST00000517484 CENPQQ7L2Z9 268 aaPredicted RBP12.27□□□□□ -0.45
EFCAB13-203ENST00000517484 MAP3K5Q99683 1374 aa12.27□□□□□ -0.45
EFCAB13-203ENST00000517484 MAP2P11137 1827 aaKnown RBP12.27□□□□□ -0.45
EFCAB13-203ENST00000517484 C9orf78Q9NZ63 289 aaPredicted RBP12.27□□□□□ -0.45
EFCAB13-203ENST00000517484 PDE4AP27815 886 aa12.26□□□□□ -0.45
EFCAB13-203ENST00000517484 ZNF496Q96IT1 587 aaPredicted RBP12.26□□□□□ -0.45
EFCAB13-203ENST00000517484 IL2RBP14784 551 aa12.26□□□□□ -0.45
EFCAB13-203ENST00000517484 USP16Q9Y5T5 823 aa12.26□□□□□ -0.45
EFCAB13-203ENST00000517484 CDK12Q9NYV4 1490 aaPredicted RBP12.26□□□□□ -0.45
EFCAB13-203ENST00000517484 IL16Q14005 1332 aa12.25□□□□□ -0.45
EFCAB13-203ENST00000517484 EXOC5O00471 708 aa12.25□□□□□ -0.45
EFCAB13-203ENST00000517484 SPRYD3Q8NCJ5 442 aa12.25□□□□□ -0.45
EFCAB13-203ENST00000517484 EXOC6BQ9Y2D4 811 aa12.25□□□□□ -0.45
EFCAB13-203ENST00000517484 SSH2Q76I76 1423 aa12.25□□□□□ -0.45
EFCAB13-203ENST00000517484 TSHZ3Q63HK5 1081 aa12.25□□□□□ -0.45
EFCAB13-203ENST00000517484 CWF19L2Q2TBE0 894 aaKnown RBP12.24□□□□□ -0.45
EFCAB13-203ENST00000517484 ZBTB3Q9H5J0 574 aa12.24□□□□□ -0.45
EFCAB13-203ENST00000517484 ANP32AP39687 249 aaKnown RBP12.24□□□□□ -0.45
EFCAB13-203ENST00000517484 ZNF853P0CG23 659 aa12.24□□□□□ -0.45
EFCAB13-203ENST00000517484 PHKG2P15735 406 aa12.24□□□□□ -0.45
EFCAB13-203ENST00000517484 ARHGEF10O15013 1369 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms