RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 SYNE3Q6ZMZ3 975 aa13.05□□□□□ -0.32
PCDHGA1-202ENST00000517417 FAM177BA6PVY3 158 aa13.05□□□□□ -0.32
PCDHGA1-202ENST00000517417 ZNF692Q9BU19 519 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA1-202ENST00000517417 KDM5AP29375 1690 aaKnown RBP13.05□□□□□ -0.32
PCDHGA1-202ENST00000517417 VPS37DQ86XT2 251 aa13.05□□□□□ -0.32
PCDHGA1-202ENST00000517417 IQGAP3Q86VI3 1631 aa13.05□□□□□ -0.32
PCDHGA1-202ENST00000517417 GOLGA6L19H0YKK7 550 aa13.05□□□□□ -0.32
PCDHGA1-202ENST00000517417 MBD3O95983 291 aa13.05□□□□□ -0.32
PCDHGA1-202ENST00000517417 XPCQ01831 940 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA1-202ENST00000517417 ATAD2Q6PL18 1390 aa13.04□□□□□ -0.32
PCDHGA1-202ENST00000517417 KLHL40Q2TBA0 621 aa13.04□□□□□ -0.32
PCDHGA1-202ENST00000517417 VPS53Q5VIR6 699 aa13.04□□□□□ -0.32
PCDHGA1-202ENST00000517417 RAD21O60216 631 aa13.04□□□□□ -0.32
PCDHGA1-202ENST00000517417 TRDNQ13061 729 aa13.04□□□□□ -0.32
PCDHGA1-202ENST00000517417 WASHC4Q2M389 1173 aa13.04□□□□□ -0.32
PCDHGA1-202ENST00000517417 BICD2Q8TD16 824 aa13.04□□□□□ -0.32
PCDHGA1-202ENST00000517417 ANKRD36BQ8N2N9 1353 aa13.03□□□□□ -0.32
PCDHGA1-202ENST00000517417 ABCA9Q8IUA7 1624 aa13.03□□□□□ -0.32
PCDHGA1-202ENST00000517417 ZMYM3Q14202 1370 aa13.03□□□□□ -0.32
PCDHGA1-202ENST00000517417 RBM25P49756 843 aaKnown RBP13.03□□□□□ -0.32
PCDHGA1-202ENST00000517417 PLEKHO1Q53GL0 409 aaPredicted RBP13.03□□□□□ -0.32
PCDHGA1-202ENST00000517417 STRN4Q9NRL3 753 aa13.03□□□□□ -0.32
PCDHGA1-202ENST00000517417 MAP7D2Q96T17 732 aa13.03□□□□□ -0.32
PCDHGA1-202ENST00000517417 CCDC61Q9Y6R9 512 aa13.03□□□□□ -0.32
PCDHGA1-202ENST00000517417 FSD2A1L4K1 749 aa13.02□□□□□ -0.32
PCDHGA1-202ENST00000517417 TSPY26PQ9H489 355 aa13.02□□□□□ -0.32
PCDHGA1-202ENST00000517417 MIS18AQ9NYP9 233 aa13.02□□□□□ -0.32
PCDHGA1-202ENST00000517417 SYCE3A1L190 88 aa13.02□□□□□ -0.33
PCDHGA1-202ENST00000517417 FSD1Q9BTV5 496 aa13.02□□□□□ -0.33
PCDHGA1-202ENST00000517417 PODXL2Q9NZ53 605 aa13.02□□□□□ -0.33
PCDHGA1-202ENST00000517417 UQCRHLA0A096LP55 91 aa13.02□□□□□ -0.33
PCDHGA1-202ENST00000517417 UQCRHP07919 91 aa13.02□□□□□ -0.33
PCDHGA1-202ENST00000517417 ZNF530Q6P9A1 599 aaPredicted RBP13.02□□□□□ -0.33
PCDHGA1-202ENST00000517417 FBXW7Q969H0 707 aa13.02□□□□□ -0.33
PCDHGA1-202ENST00000517417 GNAI2P04899 355 aa13.01□□□□□ -0.33
PCDHGA1-202ENST00000517417 SMARCA5O60264 1052 aaPredicted RBP13.01□□□□□ -0.33
PCDHGA1-202ENST00000517417 DCTN1Q14203 1278 aa13.01□□□□□ -0.33
PCDHGA1-202ENST00000517417 NUDT16Q96DE0 195 aaKnown RBP13.01□□□□□ -0.33
PCDHGA1-202ENST00000517417 PTPRTO14522 1441 aa13.01□□□□□ -0.33
PCDHGA1-202ENST00000517417 ERVK-7P63135 1459 aa13.01□□□□□ -0.33
PCDHGA1-202ENST00000517417 FBXO31Q5XUX0 539 aaPredicted RBP13.01□□□□□ -0.33
PCDHGA1-202ENST00000517417 ARAP3Q8WWN8 1544 aa13.01□□□□□ -0.33
PCDHGA1-202ENST00000517417 E9PCH4 1651 aa13.01□□□□□ -0.33
PCDHGA1-202ENST00000517417 IFT57Q9NWB7 429 aa13.01□□□□□ -0.33
PCDHGA1-202ENST00000517417 ATP10AO60312 1499 aa13.01□□□□□ -0.33
PCDHGA1-202ENST00000517417 NFXL1Q6ZNB6 911 aa13□□□□□ -0.33
PCDHGA1-202ENST00000517417 MPNDQ8N594 471 aa13□□□□□ -0.33
PCDHGA1-202ENST00000517417 CFAP74Q9C0B2 1584 aa13□□□□□ -0.33
PCDHGA1-202ENST00000517417 TRIM29Q14134 588 aa13□□□□□ -0.33
PCDHGA1-202ENST00000517417 IDI1Q13907 227 aa13□□□□□ -0.33
PCDHGA1-202ENST00000517417 CHMP4CQ96CF2 233 aa13□□□□□ -0.33
PCDHGA1-202ENST00000517417 DNAJC2Q99543 621 aaKnown RBP13□□□□□ -0.33
PCDHGA1-202ENST00000517417 SIL1Q9H173 461 aa13□□□□□ -0.33
PCDHGA1-202ENST00000517417 PDE4CQ08493 712 aa12.99□□□□□ -0.33
PCDHGA1-202ENST00000517417 TPD52L1Q16890 204 aaPredicted RBP12.99□□□□□ -0.33
PCDHGA1-202ENST00000517417 ZSCAN23Q3MJ62 389 aa12.99□□□□□ -0.33
PCDHGA1-202ENST00000517417 DDX54Q8TDD1 881 aaKnown RBP12.99□□□□□ -0.33
PCDHGA1-202ENST00000517417 RBM27Q9P2N5 1060 aaKnown RBP12.99□□□□□ -0.33
PCDHGA1-202ENST00000517417 MCM2P49736 904 aa12.99□□□□□ -0.33
PCDHGA1-202ENST00000517417 ZMYND15Q9H091 742 aa12.99□□□□□ -0.33
PCDHGA1-202ENST00000517417 UGGT1Q9NYU2 1555 aa12.99□□□□□ -0.33
PCDHGA1-202ENST00000517417 FYB1O15117 783 aa12.99□□□□□ -0.33
PCDHGA1-202ENST00000517417 KDM4AO75164 1064 aa12.99□□□□□ -0.33
PCDHGA1-202ENST00000517417 FBLN1P23142 703 aa12.99□□□□□ -0.33
PCDHGA1-202ENST00000517417 RPAP2Q8IXW5 612 aaPredicted RBP12.99□□□□□ -0.33
PCDHGA1-202ENST00000517417 CNTROBQ8N137 903 aa12.99□□□□□ -0.33
PCDHGA1-202ENST00000517417 RBM33Q96EV2 1170 aaKnown RBP12.99□□□□□ -0.33
PCDHGA1-202ENST00000517417 TRIM35Q9UPQ4 493 aa12.99□□□□□ -0.33
PCDHGA1-202ENST00000517417 RALYLQ86SE5 291 aaKnown RBP12.98□□□□□ -0.33
PCDHGA1-202ENST00000517417 CFAP65Q6ZU64 1925 aaKnown RBP12.98□□□□□ -0.33
PCDHGA1-202ENST00000517417 ZC3H6P61129 1189 aaKnown RBP12.98□□□□□ -0.33
PCDHGA1-202ENST00000517417 PDCL3Q9H2J4 239 aa12.98□□□□□ -0.33
PCDHGA1-202ENST00000517417 MYL6BP14649 208 aa12.98□□□□□ -0.33
PCDHGA1-202ENST00000517417 MCM10Q7L590 875 aa12.98□□□□□ -0.33
PCDHGA1-202ENST00000517417 MBIPQ9NS73 344 aa12.98□□□□□ -0.33
PCDHGA1-202ENST00000517417 DHX16O60231 1041 aaKnown RBP12.98□□□□□ -0.33
PCDHGA1-202ENST00000517417 TTC22Q5TAA0 569 aa12.98□□□□□ -0.33
PCDHGA1-202ENST00000517417 MAP4K4O95819 1239 aaPredicted RBP12.97□□□□□ -0.33
PCDHGA1-202ENST00000517417 MTERF4Q7Z6M4 381 aaKnown RBP12.97□□□□□ -0.33
PCDHGA1-202ENST00000517417 MRPL50Q8N5N7 158 aaKnown RBP12.97□□□□□ -0.33
PCDHGA1-202ENST00000517417 SRCIN1Q9C0H9 1055 aa12.97□□□□□ -0.33
PCDHGA1-202ENST00000517417 EMILIN1Q9Y6C2 1016 aa12.97□□□□□ -0.33
PCDHGA1-202ENST00000517417 NME9Q86XW9 330 aa12.97□□□□□ -0.33
PCDHGA1-202ENST00000517417 IL1RAPL2Q9NP60 686 aa12.97□□□□□ -0.33
PCDHGA1-202ENST00000517417 TATP17735 454 aaPredicted RBP12.97□□□□□ -0.33
PCDHGA1-202ENST00000517417 ARHGAP45Q92619 1136 aa12.97□□□□□ -0.33
PCDHGA1-202ENST00000517417 ZNF592Q92610 1267 aa12.96□□□□□ -0.33
PCDHGA1-202ENST00000517417 NOL10Q9BSC4 688 aaKnown RBP12.96□□□□□ -0.33
PCDHGA1-202ENST00000517417 INO80Q9ULG1 1556 aaPredicted RBP12.96□□□□□ -0.33
PCDHGA1-202ENST00000517417 TSPYL6Q8N831 410 aa12.96□□□□□ -0.34
PCDHGA1-202ENST00000517417 LAMC1P11047 1609 aa12.96□□□□□ -0.34
PCDHGA1-202ENST00000517417 GAS2L3Q86XJ1 694 aa12.95□□□□□ -0.34
PCDHGA1-202ENST00000517417 TNRQ92752 1358 aa12.95□□□□□ -0.34
PCDHGA1-202ENST00000517417 ZBTB7BO15156 539 aaPredicted RBP12.95□□□□□ -0.34
PCDHGA1-202ENST00000517417 CCT4P50991 539 aaKnown RBP12.95□□□□□ -0.34
PCDHGA1-202ENST00000517417 TOM1L2Q6ZVM7 507 aa12.95□□□□□ -0.34
PCDHGA1-202ENST00000517417 CCAR2Q8N163 923 aaKnown RBP12.95□□□□□ -0.34
PCDHGA1-202ENST00000517417 TRPM2O94759 1503 aa12.95□□□□□ -0.34
PCDHGA1-202ENST00000517417 LRRCC1Q9C099 1032 aa12.95□□□□□ -0.34
PCDHGA1-202ENST00000517417 A0A1W2PP64 1363 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 501.4 ms