RNA–Protein interactions for RNA: ENST00000517080.1

RNU6-1236P-201, Transcript of RNA, U6 small nuclear 1236, pseudogene, humanhuman

BASIC

Gene RNU6-1236P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1236P-201ENST00000517080 ZNF598Q86UK7 904 aaKnown RBP-0.37□□□□□ -2.47
RNU6-1236P-201ENST00000517080 SIAH1Q8IUQ4 282 aa-0.37□□□□□ -2.47
RNU6-1236P-201ENST00000517080 TRIM42Q8IWZ5 723 aa-0.37□□□□□ -2.47
RNU6-1236P-201ENST00000517080 LRRC56Q8IYG6 542 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-1236P-201ENST00000517080 PIAS4Q8N2W9 510 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-1236P-201ENST00000517080 SMARCC1Q92922 1105 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-1236P-201ENST00000517080 RELTQ969Z4 430 aa-0.37□□□□□ -2.47
RNU6-1236P-201ENST00000517080 WBP1Q96G27 269 aa-0.37□□□□□ -2.47
RNU6-1236P-201ENST00000517080 CNTNAP3BQ96NU0 1288 aa-0.37□□□□□ -2.47
RNU6-1236P-201ENST00000517080 SPAG8Q99932 426 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-1236P-201ENST00000517080 TMEM79Q9BSE2 394 aa-0.37□□□□□ -2.47
RNU6-1236P-201ENST00000517080 CNTNAP3Q9BZ76 1288 aa-0.37□□□□□ -2.47
RNU6-1236P-201ENST00000517080 PLA2G12AQ9BZM1 189 aa-0.37□□□□□ -2.47
RNU6-1236P-201ENST00000517080 FHDC1Q9C0D6 1143 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-1236P-201ENST00000517080 FZD8Q9H461 694 aa-0.37□□□□□ -2.47
RNU6-1236P-201ENST00000517080 TPSG1Q9NRR2 321 aa-0.37□□□□□ -2.47
RNU6-1236P-201ENST00000517080 C11orf21Q9P2W6 132 aa-0.37□□□□□ -2.47
RNU6-1236P-201ENST00000517080 NXF1Q9UBU9 619 aaKnown RBP-0.37□□□□□ -2.47
RNU6-1236P-201ENST00000517080 KLF15Q9UIH9 416 aa-0.37□□□□□ -2.47
RNU6-1236P-201ENST00000517080 TRPC6Q9Y210 931 aa-0.37□□□□□ -2.47
RNU6-1236P-201ENST00000517080 TEX15Q9BXT5 2789 aa-0.37□□□□□ -2.47
RNU6-1236P-201ENST00000517080 CCDC168Q8NDH2 2452 aa-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 CHD9Q3L8U1 2897 aa-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 SVILO95425 2214 aa-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 NBPF19A0A087WUL8 3843 aa-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 CAPN15O75808 1086 aa-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 DGAT1O75907 488 aa-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 BMP1P13497 986 aa-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 C6P13671 934 aa-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 SMPD1P17405 629 aa-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 SSTR4P31391 388 aa-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 TIE1P35590 1138 aa-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 THBS3P49746 956 aa-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 GP2P55259 537 aaKnown RBP-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 MARSP56192 900 aaKnown RBP-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 SNRPNP63162 240 aaKnown RBP-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 HNRNPUQ00839 825 aaKnown RBP eCLIP-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 SF3B4Q15427 424 aaKnown RBP eCLIP-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 ZNF672Q499Z4 452 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 ERFEQ4G0M1 354 aa-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 KRTAP13-2Q52LG2 175 aa-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 NAALADL2Q58DX5 795 aa-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 FBXO38Q6PIJ6 1188 aa-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 KRTAP19-3Q7Z4W3 81 aa-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 TMPRSS12Q86WS5 348 aa-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 FBXL16Q8N461 479 aa-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 SHKBP1Q8TBC3 707 aa-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 SHISA4Q96DD7 197 aa-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 MS4A3Q96HJ5 214 aa-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 WDR24Q96S15 920 aa-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 HERPUD2Q9BSE4 406 aa-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 NKX2-4Q9H2Z4 354 aa-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 SUV39H2Q9H5I1 410 aa-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 DHX33Q9H6R0 707 aaKnown RBP-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 KCNK12Q9HB15 430 aa-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 MLXIPLQ9NP71 852 aa-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 ALG13Q9NP73 1137 aaKnown RBP-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 ATP13A2Q9NQ11 1180 aa-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 ZNF275Q9NSD4 429 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 CHTOPQ9Y3Y2 248 aaKnown RBP-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 LRP12Q9Y561 859 aa-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 DMRT2Q9Y5R5 561 aa-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 PLXNB1O43157 2135 aa-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 ATXN2Q99700 1313 aaKnown RBP-0.38□□□□□ -2.47
RNU6-1236P-201ENST00000517080 TNRC18O15417 2968 aaPredicted RBP-0.39□□□□□ -2.47
RNU6-1236P-201ENST00000517080 ITPR1Q14643 2758 aa-0.39□□□□□ -2.47
RNU6-1236P-201ENST00000517080 ABCA12Q86UK0 2595 aa-0.39□□□□□ -2.47
RNU6-1236P-201ENST00000517080 MYCBP2O75592 4640 aa-0.39□□□□□ -2.47
RNU6-1236P-201ENST00000517080 MTORP42345 2549 aa-0.39□□□□□ -2.47
RNU6-1236P-201ENST00000517080 NCOR1O75376 2440 aa-0.39□□□□□ -2.47
RNU6-1236P-201ENST00000517080 PLSCR5A0PG75 271 aa-0.39□□□□□ -2.47
RNU6-1236P-201ENST00000517080 ERI2A8K979 691 aaKnown RBP-0.39□□□□□ -2.47
RNU6-1236P-201ENST00000517080 IKBKBO14920 756 aa-0.39□□□□□ -2.47
RNU6-1236P-201ENST00000517080 CBFA2T3O75081 653 aa-0.39□□□□□ -2.47
RNU6-1236P-201ENST00000517080 ELNP15502 786 aa-0.39□□□□□ -2.47
RNU6-1236P-201ENST00000517080 SYN1P17600 705 aa-0.39□□□□□ -2.47
RNU6-1236P-201ENST00000517080 CTGFP29279 349 aa-0.39□□□□□ -2.47
RNU6-1236P-201ENST00000517080 RGS3P49796 1198 aa-0.39□□□□□ -2.47
RNU6-1236P-201ENST00000517080 COL10A1Q03692 680 aa-0.39□□□□□ -2.47
RNU6-1236P-201ENST00000517080 TROAPQ12815 778 aa-0.39□□□□□ -2.47
RNU6-1236P-201ENST00000517080 NFATC4Q14934 902 aa-0.39□□□□□ -2.47
RNU6-1236P-201ENST00000517080 TMEM132AQ24JP5 1023 aa-0.39□□□□□ -2.47
RNU6-1236P-201ENST00000517080 KRTAP15-1Q3LI76 137 aa-0.39□□□□□ -2.47
RNU6-1236P-201ENST00000517080 KRTAP13-4Q3LI77 160 aa-0.39□□□□□ -2.47
RNU6-1236P-201ENST00000517080 TIGD5Q53EQ6 642 aa-0.39□□□□□ -2.47
RNU6-1236P-201ENST00000517080 ZKSCAN2Q63HK3 967 aa-0.39□□□□□ -2.47
RNU6-1236P-201ENST00000517080 HIST2H2BCQ6DN03 193 aa-0.39□□□□□ -2.47
RNU6-1236P-201ENST00000517080 DMKNQ6E0U4 476 aaPredicted RBP-0.39□□□□□ -2.47
RNU6-1236P-201ENST00000517080 ADGRD1Q6QNK2 874 aa-0.39□□□□□ -2.47
RNU6-1236P-201ENST00000517080 LYPD4Q6UWN0 246 aa-0.39□□□□□ -2.47
RNU6-1236P-201ENST00000517080 DLK2Q6UY11 383 aa-0.39□□□□□ -2.47
RNU6-1236P-201ENST00000517080 ZNF687Q8N1G0 1237 aa-0.39□□□□□ -2.47
RNU6-1236P-201ENST00000517080 SPEM1Q8N4L4 309 aa-0.39□□□□□ -2.47
RNU6-1236P-201ENST00000517080 FAM160A2Q8N612 972 aaPredicted RBP-0.39□□□□□ -2.47
RNU6-1236P-201ENST00000517080 SIMC1Q8NDZ2 872 aa-0.39□□□□□ -2.47
RNU6-1236P-201ENST00000517080 SLC16A10Q8TF71 515 aa-0.39□□□□□ -2.47
RNU6-1236P-201ENST00000517080 TRIM52Q96A61 297 aa-0.39□□□□□ -2.47
RNU6-1236P-201ENST00000517080 PYGO2Q9BRQ0 406 aa-0.39□□□□□ -2.47
RNU6-1236P-201ENST00000517080 PCED1AQ9H1Q7 454 aa-0.39□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms