RNA–Protein interactions for RNA: ENST00000516918.1

SCARNA11.1-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 132 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.1-201ENST00000516918 ZCRB1Q8TBF4 217 aaKnown RBP9.87□□□□□ -0.83
SCARNA11.1-201ENST00000516918 COG3Q96JB2 828 aa9.87□□□□□ -0.83
SCARNA11.1-201ENST00000516918 CCNL1Q9UK58 526 aaPredicted RBP9.87□□□□□ -0.83
SCARNA11.1-201ENST00000516918 LTN1O94822 1766 aa9.87□□□□□ -0.83
SCARNA11.1-201ENST00000516918 COL23A1Q86Y22 540 aaPredicted RBP9.86□□□□□ -0.83
SCARNA11.1-201ENST00000516918 USHBP1Q8N6Y0 703 aa9.86□□□□□ -0.83
SCARNA11.1-201ENST00000516918 ANKRD36BQ8N2N9 1353 aa9.86□□□□□ -0.83
SCARNA11.1-201ENST00000516918 YBX3P16989 372 aaKnown RBP eCLIP9.85□□□□□ -0.83
SCARNA11.1-201ENST00000516918 RRS1Q15050 365 aaKnown RBP9.85□□□□□ -0.83
SCARNA11.1-201ENST00000516918 NSD2O96028 1365 aa9.85□□□□□ -0.83
SCARNA11.1-201ENST00000516918 USP54Q70EL1 1684 aa9.84□□□□□ -0.83
SCARNA11.1-201ENST00000516918 NBPF6Q5VWK0 638 aa9.84□□□□□ -0.83
SCARNA11.1-201ENST00000516918 NBPF4Q96M43 638 aa9.84□□□□□ -0.83
SCARNA11.1-201ENST00000516918 MEGF6O75095 1541 aa9.83□□□□□ -0.84
SCARNA11.1-201ENST00000516918 ST20-MTHFSA0A0A6YYL1 179 aa9.83□□□□□ -0.84
SCARNA11.1-201ENST00000516918 GRIN3BO60391 1043 aa9.83□□□□□ -0.84
SCARNA11.1-201ENST00000516918 PUS7Q96PZ0 661 aaKnown RBP9.83□□□□□ -0.84
SCARNA11.1-201ENST00000516918 USP47Q96K76 1375 aa9.83□□□□□ -0.84
SCARNA11.1-201ENST00000516918 RAPGEF4Q8WZA2 1011 aa9.82□□□□□ -0.84
SCARNA11.1-201ENST00000516918 TESK2Q96S53 571 aa9.82□□□□□ -0.84
SCARNA11.1-201ENST00000516918 GGNBP2Q9H3C7 697 aa9.82□□□□□ -0.84
SCARNA11.1-201ENST00000516918 TONSLQ96HA7 1378 aa9.81□□□□□ -0.84
SCARNA11.1-201ENST00000516918 TATP17735 454 aaPredicted RBP9.81□□□□□ -0.84
SCARNA11.1-201ENST00000516918 MPRIPQ6WCQ1 1025 aa9.81□□□□□ -0.84
SCARNA11.1-201ENST00000516918 SMIM5Q71RC9 77 aa9.81□□□□□ -0.84
SCARNA11.1-201ENST00000516918 WWC3Q9ULE0 1092 aa9.81□□□□□ -0.84
SCARNA11.1-201ENST00000516918 TUBGCP6Q96RT7 1819 aa9.81□□□□□ -0.84
SCARNA11.1-201ENST00000516918 DOT1LQ8TEK3 1739 aa9.8□□□□□ -0.84
SCARNA11.1-201ENST00000516918 FYB1O15117 783 aa9.8□□□□□ -0.84
SCARNA11.1-201ENST00000516918 HSP90AB2PQ58FF8 381 aa9.8□□□□□ -0.84
SCARNA11.1-201ENST00000516918 FAM208AQ9UK61 1670 aaKnown RBP9.8□□□□□ -0.84
SCARNA11.1-201ENST00000516918 QSER1Q2KHR3 1735 aa9.79□□□□□ -0.84
SCARNA11.1-201ENST00000516918 PALLDQ8WX93 1383 aa9.79□□□□□ -0.84
SCARNA11.1-201ENST00000516918 RGPD2P0DJD1 1756 aa9.79□□□□□ -0.84
SCARNA11.1-201ENST00000516918 PHF14O94880 888 aa9.79□□□□□ -0.84
SCARNA11.1-201ENST00000516918 ZNF526Q8TF50 670 aaPredicted RBP9.79□□□□□ -0.84
SCARNA11.1-201ENST00000516918 ATP10DQ9P241 1426 aa9.79□□□□□ -0.84
SCARNA11.1-201ENST00000516918 CGNL1Q0VF96 1302 aa9.79□□□□□ -0.84
SCARNA11.1-201ENST00000516918 SHANK3Q9BYB0 1731 aa9.79□□□□□ -0.84
SCARNA11.1-201ENST00000516918 RTL1A6NKG5 1358 aa9.78□□□□□ -0.84
SCARNA11.1-201ENST00000516918 CYP27B1O15528 508 aa9.78□□□□□ -0.84
SCARNA11.1-201ENST00000516918 AMIGO3Q86WK7 504 aa9.78□□□□□ -0.84
SCARNA11.1-201ENST00000516918 GPBP1L1Q9HC44 474 aaPredicted RBP9.78□□□□□ -0.84
SCARNA11.1-201ENST00000516918 CD2APQ9Y5K6 639 aa9.78□□□□□ -0.84
SCARNA11.1-201ENST00000516918 LY75O60449 1722 aa9.78□□□□□ -0.84
SCARNA11.1-201ENST00000516918 COL24A1Q17RW2 1714 aa9.78□□□□□ -0.84
SCARNA11.1-201ENST00000516918 PCDH11XQ9BZA7 1347 aa9.78□□□□□ -0.84
SCARNA11.1-201ENST00000516918 PCDH11YQ9BZA8 1340 aa9.78□□□□□ -0.84
SCARNA11.1-201ENST00000516918 SMG6Q86US8 1419 aaKnown RBP9.77□□□□□ -0.85
SCARNA11.1-201ENST00000516918 IFFO2Q5TF58 517 aa9.77□□□□□ -0.85
SCARNA11.1-201ENST00000516918 FLAD1Q8NFF5 587 aa9.77□□□□□ -0.85
SCARNA11.1-201ENST00000516918 AK7Q96M32 723 aa9.77□□□□□ -0.85
SCARNA11.1-201ENST00000516918 PIGBQ92521 554 aa9.76□□□□□ -0.85
SCARNA11.1-201ENST00000516918 SMARCC1Q92922 1105 aaPredicted RBP9.76□□□□□ -0.85
SCARNA11.1-201ENST00000516918 INSRP06213 1382 aa9.75□□□□□ -0.85
SCARNA11.1-201ENST00000516918 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.75□□□□□ -0.85
SCARNA11.1-201ENST00000516918 PPM1GO15355 546 aaPredicted RBP9.75□□□□□ -0.85
SCARNA11.1-201ENST00000516918 SLC24A1O60721 1099 aa9.75□□□□□ -0.85
SCARNA11.1-201ENST00000516918 TMF1P82094 1093 aa9.75□□□□□ -0.85
SCARNA11.1-201ENST00000516918 EMILIN1Q9Y6C2 1016 aa9.75□□□□□ -0.85
SCARNA11.1-201ENST00000516918 IGSF1Q8N6C5 1336 aa9.75□□□□□ -0.85
SCARNA11.1-201ENST00000516918 HMGB2P26583 209 aaKnown RBP9.74□□□□□ -0.85
SCARNA11.1-201ENST00000516918 LINC00116Q8NCU8 138 aa9.74□□□□□ -0.85
SCARNA11.1-201ENST00000516918 FLT4P35916 1363 aa9.74□□□□□ -0.85
SCARNA11.1-201ENST00000516918 LOC102724428A0A0B4J2F2 783 aa9.73□□□□□ -0.85
SCARNA11.1-201ENST00000516918 HSPA6P17066 643 aa9.73□□□□□ -0.85
SCARNA11.1-201ENST00000516918 SIK1P57059 783 aa9.73□□□□□ -0.85
SCARNA11.1-201ENST00000516918 CARD14Q9BXL6 1004 aa9.73□□□□□ -0.85
SCARNA11.1-201ENST00000516918 C5P01031 1676 aa9.73□□□□□ -0.85
SCARNA11.1-201ENST00000516918 GOLGB1Q14789 3259 aaKnown RBP9.73□□□□□ -0.85
SCARNA11.1-201ENST00000516918 GNPATO15228 680 aa9.72□□□□□ -0.85
SCARNA11.1-201ENST00000516918 ITPK1Q13572 414 aa9.72□□□□□ -0.85
SCARNA11.1-201ENST00000516918 ASAP1Q9ULH1 1129 aa9.72□□□□□ -0.85
SCARNA11.1-201ENST00000516918 SPG7Q9UQ90 795 aa9.72□□□□□ -0.85
SCARNA11.1-201ENST00000516918 ADCY9O60503 1353 aa9.72□□□□□ -0.85
SCARNA11.1-201ENST00000516918 SSFA2P28290 1259 aa9.71□□□□□ -0.86
SCARNA11.1-201ENST00000516918 ATP6V1AP38606 617 aa9.71□□□□□ -0.86
SCARNA11.1-201ENST00000516918 NKX1-1Q15270 411 aaPredicted RBP9.71□□□□□ -0.86
SCARNA11.1-201ENST00000516918 EYA1Q99502 592 aa9.71□□□□□ -0.86
SCARNA11.1-201ENST00000516918 TMOD3Q9NYL9 352 aa9.71□□□□□ -0.86
SCARNA11.1-201ENST00000516918 C4BP0C0L5 1744 aa9.7□□□□□ -0.86
SCARNA11.1-201ENST00000516918 KIF3CO14782 793 aa9.7□□□□□ -0.86
SCARNA11.1-201ENST00000516918 MMP10P09238 476 aa9.7□□□□□ -0.86
SCARNA11.1-201ENST00000516918 KIF24Q5T7B8 1368 aa9.7□□□□□ -0.86
SCARNA11.1-201ENST00000516918 NSD3Q9BZ95 1437 aa9.7□□□□□ -0.86
SCARNA11.1-201ENST00000516918 TAF1LQ8IZX4 1826 aa9.7□□□□□ -0.86
SCARNA11.1-201ENST00000516918 PHKG2P15735 406 aa9.69□□□□□ -0.86
SCARNA11.1-201ENST00000516918 CDCA8Q53HL2 280 aa9.69□□□□□ -0.86
SCARNA11.1-201ENST00000516918 IFNL2Q8IZJ0 200 aa9.69□□□□□ -0.86
SCARNA11.1-201ENST00000516918 ATG3Q9NT62 314 aa9.69□□□□□ -0.86
SCARNA11.1-201ENST00000516918 TOGARAM1Q9Y4F4 1720 aa9.69□□□□□ -0.86
SCARNA11.1-201ENST00000516918 WASHC2AQ641Q2 1341 aa9.68□□□□□ -0.86
SCARNA11.1-201ENST00000516918 A0A0G2JLW4 131 aa9.68□□□□□ -0.86
SCARNA11.1-201ENST00000516918 TNNT2P45379 298 aaPredicted RBP9.68□□□□□ -0.86
SCARNA11.1-201ENST00000516918 POLR3GLQ9BT43 218 aa9.68□□□□□ -0.86
SCARNA11.1-201ENST00000516918 RBM42Q9BTD8 480 aaKnown RBP9.68□□□□□ -0.86
SCARNA11.1-201ENST00000516918 BCS1LQ9Y276 419 aa9.68□□□□□ -0.86
SCARNA11.1-201ENST00000516918 UBR3Q6ZT12 1888 aa9.68□□□□□ -0.86
SCARNA11.1-201ENST00000516918 ITGB4P16144 1822 aa9.68□□□□□ -0.86
SCARNA11.1-201ENST00000516918 TRAPPC3LQ5T215 181 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms