RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 ZNF784Q8NCA9 323 aaPredicted RBP11.73□□□□□ -0.53
SCARNA20.3-201ENST00000516913 TONSLQ96HA7 1378 aa11.73□□□□□ -0.53
SCARNA20.3-201ENST00000516913 SHANK3Q9BYB0 1731 aa11.72□□□□□ -0.53
SCARNA20.3-201ENST00000516913 NLGN2Q8NFZ4 835 aa11.72□□□□□ -0.53
SCARNA20.3-201ENST00000516913 ARXQ96QS3 562 aa11.72□□□□□ -0.53
SCARNA20.3-201ENST00000516913 CYP27B1O15528 508 aa11.71□□□□□ -0.53
SCARNA20.3-201ENST00000516913 ZCRB1Q8TBF4 217 aaKnown RBP11.71□□□□□ -0.53
SCARNA20.3-201ENST00000516913 COG3Q96JB2 828 aa11.71□□□□□ -0.53
SCARNA20.3-201ENST00000516913 ANKRD36BQ8N2N9 1353 aa11.7□□□□□ -0.54
SCARNA20.3-201ENST00000516913 COL23A1Q86Y22 540 aaPredicted RBP11.7□□□□□ -0.54
SCARNA20.3-201ENST00000516913 EMILIN1Q9Y6C2 1016 aa11.7□□□□□ -0.54
SCARNA20.3-201ENST00000516913 USP47Q96K76 1375 aa11.69□□□□□ -0.54
SCARNA20.3-201ENST00000516913 AMPHP49418 695 aa11.69□□□□□ -0.54
SCARNA20.3-201ENST00000516913 MAP3K5Q99683 1374 aa11.68□□□□□ -0.54
SCARNA20.3-201ENST00000516913 KAT6BQ8WYB5 2073 aa11.68□□□□□ -0.54
SCARNA20.3-201ENST00000516913 SYTL4Q96C24 671 aaPredicted RBP11.68□□□□□ -0.54
SCARNA20.3-201ENST00000516913 TUBGCP6Q96RT7 1819 aa11.67□□□□□ -0.54
SCARNA20.3-201ENST00000516913 YBX3P16989 372 aaKnown RBP eCLIP11.67□□□□□ -0.54
SCARNA20.3-201ENST00000516913 SLC27A3Q5K4L6 730 aa11.67□□□□□ -0.54
SCARNA20.3-201ENST00000516913 COL24A1Q17RW2 1714 aa11.66□□□□□ -0.54
SCARNA20.3-201ENST00000516913 MSL1Q68DK7 614 aa11.66□□□□□ -0.54
SCARNA20.3-201ENST00000516913 TFCP2L1Q9NZI6 479 aa11.65□□□□□ -0.54
SCARNA20.3-201ENST00000516913 CCNL1Q9UK58 526 aaPredicted RBP11.65□□□□□ -0.54
SCARNA20.3-201ENST00000516913 DOT1LQ8TEK3 1739 aa11.65□□□□□ -0.54
SCARNA20.3-201ENST00000516913 INSRP06213 1382 aa11.65□□□□□ -0.55
SCARNA20.3-201ENST00000516913 NCAPD2Q15021 1401 aa11.64□□□□□ -0.55
SCARNA20.3-201ENST00000516913 PIGBQ92521 554 aa11.64□□□□□ -0.55
SCARNA20.3-201ENST00000516913 RTL1A6NKG5 1358 aa11.64□□□□□ -0.55
SCARNA20.3-201ENST00000516913 LY75O60449 1722 aa11.63□□□□□ -0.55
SCARNA20.3-201ENST00000516913 SLC16A10Q8TF71 515 aa11.63□□□□□ -0.55
SCARNA20.3-201ENST00000516913 SLC4A9Q96Q91 983 aa11.63□□□□□ -0.55
SCARNA20.3-201ENST00000516913 TOGARAM1Q9Y4F4 1720 aa11.63□□□□□ -0.55
SCARNA20.3-201ENST00000516913 NSD3Q9BZ95 1437 aa11.62□□□□□ -0.55
SCARNA20.3-201ENST00000516913 TMF1P82094 1093 aa11.62□□□□□ -0.55
SCARNA20.3-201ENST00000516913 MPRIPQ6WCQ1 1025 aa11.62□□□□□ -0.55
SCARNA20.3-201ENST00000516913 EYA1Q99502 592 aa11.62□□□□□ -0.55
SCARNA20.3-201ENST00000516913 POLKQ9UBT6 870 aa11.62□□□□□ -0.55
SCARNA20.3-201ENST00000516913 ITPK1Q13572 414 aa11.61□□□□□ -0.55
SCARNA20.3-201ENST00000516913 NKX1-1Q15270 411 aaPredicted RBP11.61□□□□□ -0.55
SCARNA20.3-201ENST00000516913 KLHL34Q8N239 644 aa11.61□□□□□ -0.55
SCARNA20.3-201ENST00000516913 FLT4P35916 1363 aa11.6□□□□□ -0.55
SCARNA20.3-201ENST00000516913 PALLDQ8WX93 1383 aa11.6□□□□□ -0.55
SCARNA20.3-201ENST00000516913 TATP17735 454 aaPredicted RBP11.6□□□□□ -0.55
SCARNA20.3-201ENST00000516913 LINC00116Q8NCU8 138 aa11.6□□□□□ -0.55
SCARNA20.3-201ENST00000516913 ASAP1Q9ULH1 1129 aa11.6□□□□□ -0.55
SCARNA20.3-201ENST00000516913 TRIM26Q12899 539 aaPredicted RBP11.59□□□□□ -0.55
SCARNA20.3-201ENST00000516913 GPR162Q16538 588 aa11.59□□□□□ -0.55
SCARNA20.3-201ENST00000516913 RAPGEF4Q8WZA2 1011 aa11.59□□□□□ -0.55
SCARNA20.3-201ENST00000516913 QSER1Q2KHR3 1735 aa11.59□□□□□ -0.55
SCARNA20.3-201ENST00000516913 WASHC2AQ641Q2 1341 aa11.59□□□□□ -0.55
SCARNA20.3-201ENST00000516913 EIF4A2Q14240 407 aaKnown RBP11.58□□□□□ -0.56
SCARNA20.3-201ENST00000516913 WWC3Q9ULE0 1092 aa11.58□□□□□ -0.56
SCARNA20.3-201ENST00000516913 CGNL1Q0VF96 1302 aa11.58□□□□□ -0.56
SCARNA20.3-201ENST00000516913 PPM1GO15355 546 aaPredicted RBP11.57□□□□□ -0.56
SCARNA20.3-201ENST00000516913 C1QTNF8P60827 252 aa11.57□□□□□ -0.56
SCARNA20.3-201ENST00000516913 PELP1Q8IZL8 1130 aaKnown RBP11.57□□□□□ -0.56
SCARNA20.3-201ENST00000516913 ATG3Q9NT62 314 aa11.57□□□□□ -0.56
SCARNA20.3-201ENST00000516913 MAP2P11137 1827 aaKnown RBP11.57□□□□□ -0.56
SCARNA20.3-201ENST00000516913 PCDH11XQ9BZA7 1347 aa11.57□□□□□ -0.56
SCARNA20.3-201ENST00000516913 PCDH11YQ9BZA8 1340 aa11.57□□□□□ -0.56
SCARNA20.3-201ENST00000516913 DCAF8L1A6NGE4 600 aa11.56□□□□□ -0.56
SCARNA20.3-201ENST00000516913 MSH5O43196 834 aa11.56□□□□□ -0.56
SCARNA20.3-201ENST00000516913 POLD1P28340 1107 aa11.56□□□□□ -0.56
SCARNA20.3-201ENST00000516913 TNNT2P45379 298 aaPredicted RBP11.56□□□□□ -0.56
SCARNA20.3-201ENST00000516913 KIF24Q5T7B8 1368 aa11.55□□□□□ -0.56
SCARNA20.3-201ENST00000516913 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.55□□□□□ -0.56
SCARNA20.3-201ENST00000516913 PHKG2P15735 406 aa11.55□□□□□ -0.56
SCARNA20.3-201ENST00000516913 AEBP1Q8IUX7 1158 aa11.55□□□□□ -0.56
SCARNA20.3-201ENST00000516913 LOC102724428A0A0B4J2F2 783 aa11.54□□□□□ -0.56
SCARNA20.3-201ENST00000516913 PHF14O94880 888 aa11.54□□□□□ -0.56
SCARNA20.3-201ENST00000516913 SIK1P57059 783 aa11.54□□□□□ -0.56
SCARNA20.3-201ENST00000516913 PKD1L3Q7Z443 1732 aa11.54□□□□□ -0.56
SCARNA20.3-201ENST00000516913 HSPA5P11021 654 aaKnown RBP11.53□□□□□ -0.56
SCARNA20.3-201ENST00000516913 ITGB4P16144 1822 aa11.53□□□□□ -0.56
SCARNA20.3-201ENST00000516913 TAF1LQ8IZX4 1826 aa11.53□□□□□ -0.56
SCARNA20.3-201ENST00000516913 KIF20BQ96Q89 1820 aa11.53□□□□□ -0.56
SCARNA20.3-201ENST00000516913 KDRP35968 1356 aa11.53□□□□□ -0.56
SCARNA20.3-201ENST00000516913 CHD4Q14839 1912 aa11.52□□□□□ -0.56
SCARNA20.3-201ENST00000516913 C5P01031 1676 aa11.52□□□□□ -0.56
SCARNA20.3-201ENST00000516913 KDM6AO15550 1401 aaPredicted RBP11.52□□□□□ -0.56
SCARNA20.3-201ENST00000516913 C4BP0C0L5 1744 aa11.52□□□□□ -0.56
SCARNA20.3-201ENST00000516913 ANKRD26Q9UPS8 1709 aa11.52□□□□□ -0.56
SCARNA20.3-201ENST00000516913 SLC24A1O60721 1099 aa11.52□□□□□ -0.57
SCARNA20.3-201ENST00000516913 PANK3Q9H999 370 aa11.52□□□□□ -0.57
SCARNA20.3-201ENST00000516913 CD2APQ9Y5K6 639 aa11.52□□□□□ -0.57
SCARNA20.3-201ENST00000516913 SMG6Q86US8 1419 aaKnown RBP11.52□□□□□ -0.57
SCARNA20.3-201ENST00000516913 SENP3-EIF4A1A0A087X0R7 540 aa11.51□□□□□ -0.57
SCARNA20.3-201ENST00000516913 PCGF6Q9BYE7 350 aa11.51□□□□□ -0.57
SCARNA20.3-201ENST00000516913 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.51□□□□□ -0.57
SCARNA20.3-201ENST00000516913 IGSF1Q8N6C5 1336 aa11.51□□□□□ -0.57
SCARNA20.3-201ENST00000516913 ADCY9O60503 1353 aa11.51□□□□□ -0.57
SCARNA20.3-201ENST00000516913 UBR3Q6ZT12 1888 aa11.51□□□□□ -0.57
SCARNA20.3-201ENST00000516913 PCNTO95613 3336 aa11.5□□□□□ -0.57
SCARNA20.3-201ENST00000516913 POLR3GLQ9BT43 218 aa11.5□□□□□ -0.57
SCARNA20.3-201ENST00000516913 ATP10DQ9P241 1426 aa11.5□□□□□ -0.57
SCARNA20.3-201ENST00000516913 ATP6V1AP38606 617 aa11.49□□□□□ -0.57
SCARNA20.3-201ENST00000516913 CDCA8Q53HL2 280 aa11.49□□□□□ -0.57
SCARNA20.3-201ENST00000516913 IFNL2Q8IZJ0 200 aa11.49□□□□□ -0.57
SCARNA20.3-201ENST00000516913 SMARCC1Q92922 1105 aaPredicted RBP11.49□□□□□ -0.57
SCARNA20.3-201ENST00000516913 TMOD3Q9NYL9 352 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms