RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 ACSBG1Q96GR2 724 aa15.24■□□□□ 0.03
SCARNA16.1-201ENST00000516133 KAT6BQ8WYB5 2073 aa15.24■□□□□ 0.03
SCARNA16.1-201ENST00000516133 SBF2Q86WG5 1849 aa15.23■□□□□ 0.03
SCARNA16.1-201ENST00000516133 NPC1L1Q9UHC9 1359 aa15.23■□□□□ 0.03
SCARNA16.1-201ENST00000516133 MEGF6O75095 1541 aa15.22■□□□□ 0.03
SCARNA16.1-201ENST00000516133 RGPD2P0DJD1 1756 aa15.22■□□□□ 0.03
SCARNA16.1-201ENST00000516133 CC2D1BQ5T0F9 858 aaKnown RBP15.22■□□□□ 0.03
SCARNA16.1-201ENST00000516133 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.22■□□□□ 0.03
SCARNA16.1-201ENST00000516133 SPG7Q9UQ90 795 aa15.21■□□□□ 0.03
SCARNA16.1-201ENST00000516133 PCDH11XQ9BZA7 1347 aa15.2■□□□□ 0.02
SCARNA16.1-201ENST00000516133 PCDH11YQ9BZA8 1340 aa15.2■□□□□ 0.02
SCARNA16.1-201ENST00000516133 NCAPD2Q15021 1401 aa15.2■□□□□ 0.02
SCARNA16.1-201ENST00000516133 PSDA5PKW4 1024 aaPredicted RBP15.2■□□□□ 0.02
SCARNA16.1-201ENST00000516133 PRIM1P49642 420 aaKnown RBP15.2■□□□□ 0.02
SCARNA16.1-201ENST00000516133 MTHFSP49914 203 aa15.2■□□□□ 0.02
SCARNA16.1-201ENST00000516133 R3HDM1Q15032 1099 aaKnown RBP15.19■□□□□ 0.02
SCARNA16.1-201ENST00000516133 TXNRD1Q16881 649 aa15.19■□□□□ 0.02
SCARNA16.1-201ENST00000516133 PROM2Q8N271 834 aa15.19■□□□□ 0.02
SCARNA16.1-201ENST00000516133 SYTL4Q96C24 671 aaPredicted RBP15.19■□□□□ 0.02
SCARNA16.1-201ENST00000516133 IGSF1Q8N6C5 1336 aa15.18■□□□□ 0.02
SCARNA16.1-201ENST00000516133 PLEKHG2Q9H7P9 1386 aa15.17■□□□□ 0.02
SCARNA16.1-201ENST00000516133 CYP27B1O15528 508 aa15.17■□□□□ 0.02
SCARNA16.1-201ENST00000516133 IL13P35225 146 aa15.16■□□□□ 0.02
SCARNA16.1-201ENST00000516133 CNGB1Q14028 1251 aaPredicted RBP15.16■□□□□ 0.02
SCARNA16.1-201ENST00000516133 NKX1-1Q15270 411 aaPredicted RBP15.16■□□□□ 0.02
SCARNA16.1-201ENST00000516133 RGPD3A6NKT7 1758 aaPredicted RBP15.16■□□□□ 0.02
SCARNA16.1-201ENST00000516133 RGPD4Q7Z3J3 1758 aa15.16■□□□□ 0.02
SCARNA16.1-201ENST00000516133 IFNL2Q8IZJ0 200 aa15.15■□□□□ 0.02
SCARNA16.1-201ENST00000516133 NHSQ6T4R5 1651 aa15.15■□□□□ 0.02
SCARNA16.1-201ENST00000516133 AMOTQ4VCS5 1084 aa15.14■□□□□ 0.01
SCARNA16.1-201ENST00000516133 PLEKHO1Q53GL0 409 aaPredicted RBP15.14■□□□□ 0.01
SCARNA16.1-201ENST00000516133 SLC27A3Q5K4L6 730 aa15.14■□□□□ 0.01
SCARNA16.1-201ENST00000516133 SULT6B1Q6IMI4 303 aa15.14■□□□□ 0.01
SCARNA16.1-201ENST00000516133 RREB1Q92766 1687 aa15.13■□□□□ 0.01
SCARNA16.1-201ENST00000516133 DIAPH1O60610 1272 aaKnown RBP15.13■□□□□ 0.01
SCARNA16.1-201ENST00000516133 ZEB1P37275 1124 aaPredicted RBP15.13■□□□□ 0.01
SCARNA16.1-201ENST00000516133 STK32BQ9NY57 414 aa15.13■□□□□ 0.01
SCARNA16.1-201ENST00000516133 PHKG2P15735 406 aa15.12■□□□□ 0.01
SCARNA16.1-201ENST00000516133 HMGB2P26583 209 aaKnown RBP15.12■□□□□ 0.01
SCARNA16.1-201ENST00000516133 HSP90AB1P08238 724 aaKnown RBP15.11■□□□□ 0.01
SCARNA16.1-201ENST00000516133 MPRIPQ6WCQ1 1025 aa15.11■□□□□ 0.01
SCARNA16.1-201ENST00000516133 AEBP1Q8IUX7 1158 aa15.11■□□□□ 0.01
SCARNA16.1-201ENST00000516133 NUP188Q5SRE5 1749 aa15.11■□□□□ 0.01
SCARNA16.1-201ENST00000516133 SHANK3Q9BYB0 1731 aa15.11■□□□□ 0.01
SCARNA16.1-201ENST00000516133 KDRP35968 1356 aa15.11■□□□□ 0.01
SCARNA16.1-201ENST00000516133 BTAF1O14981 1849 aa15.1■□□□□ 0.01
SCARNA16.1-201ENST00000516133 SLC15A2Q16348 729 aa15.1■□□□□ 0.01
SCARNA16.1-201ENST00000516133 ANO8Q9HCE9 1232 aaPredicted RBP15.1■□□□□ 0.01
SCARNA16.1-201ENST00000516133 SMARCC1Q92922 1105 aaPredicted RBP15.09■□□□□ 0.01
SCARNA16.1-201ENST00000516133 CFAP53Q96M91 514 aa15.09■□□□□ 0.01
SCARNA16.1-201ENST00000516133 LRRC4BQ9NT99 713 aa15.09■□□□□ 0.01
SCARNA16.1-201ENST00000516133 PKD1L3Q7Z443 1732 aa15.09■□□□□ 0.01
SCARNA16.1-201ENST00000516133 C1orf141Q5JVX7 400 aa15.08■□□□□ 0
SCARNA16.1-201ENST00000516133 ZNF530Q6P9A1 599 aaPredicted RBP15.08■□□□□ 0
SCARNA16.1-201ENST00000516133 PIGBQ92521 554 aa15.08■□□□□ 0
SCARNA16.1-201ENST00000516133 DCAF5Q96JK2 942 aa15.08■□□□□ 0
SCARNA16.1-201ENST00000516133 ERVV-2B6SEH9 535 aa15.07■□□□□ 0
SCARNA16.1-201ENST00000516133 TMOD3Q9NYL9 352 aa15.07■□□□□ 0
SCARNA16.1-201ENST00000516133 CCNL1Q9UK58 526 aaPredicted RBP15.07■□□□□ 0
SCARNA16.1-201ENST00000516133 DOT1LQ8TEK3 1739 aa15.06■□□□□ 0
SCARNA16.1-201ENST00000516133 HMOX1P09601 288 aa15.06■□□□□ 0
SCARNA16.1-201ENST00000516133 PPP2R1AP30153 589 aa15.06■□□□□ 0
SCARNA16.1-201ENST00000516133 SPON1Q9HCB6 807 aa15.06■□□□□ 0
SCARNA16.1-201ENST00000516133 U2SURPO15042 1029 aaKnown RBP15.05■□□□□ -0
SCARNA16.1-201ENST00000516133 NUDCQ9Y266 331 aa15.05■□□□□ -0
SCARNA16.1-201ENST00000516133 PALLDQ8WX93 1383 aa15.04■□□□□ -0
SCARNA16.1-201ENST00000516133 KCNQ4P56696 695 aa15.04■□□□□ -0
SCARNA16.1-201ENST00000516133 AKT1S1Q96B36 256 aa15.04■□□□□ -0
SCARNA16.1-201ENST00000516133 DDX10Q13206 875 aaKnown RBP15.03■□□□□ -0
SCARNA16.1-201ENST00000516133 AKAP4Q5JQC9 854 aa15.03■□□□□ -0
SCARNA16.1-201ENST00000516133 CABP4P57796 275 aa15.02■□□□□ -0
SCARNA16.1-201ENST00000516133 ZNF827Q17R98 1081 aa15.02■□□□□ -0
SCARNA16.1-201ENST00000516133 TFCP2L1Q9NZI6 479 aa15.02■□□□□ -0
SCARNA16.1-201ENST00000516133 ASAP1Q9ULH1 1129 aa15.02■□□□□ -0
SCARNA16.1-201ENST00000516133 LRP5O75197 1615 aa15.02□□□□□ -0.01
SCARNA16.1-201ENST00000516133 PDGFDQ9GZP0 370 aaPredicted RBP15.01□□□□□ -0.01
SCARNA16.1-201ENST00000516133 COL3A1P02461 1466 aaPredicted RBP15.01□□□□□ -0.01
SCARNA16.1-201ENST00000516133 LOC102724428A0A0B4J2F2 783 aa15□□□□□ -0.01
SCARNA16.1-201ENST00000516133 ZBTB7AO95365 584 aa15□□□□□ -0.01
SCARNA16.1-201ENST00000516133 SIK1P57059 783 aa15□□□□□ -0.01
SCARNA16.1-201ENST00000516133 RALBP1Q15311 655 aa15□□□□□ -0.01
SCARNA16.1-201ENST00000516133 MTHFSDQ2M296 383 aaKnown RBP15□□□□□ -0.01
SCARNA16.1-201ENST00000516133 SLC16A10Q8TF71 515 aa15□□□□□ -0.01
SCARNA16.1-201ENST00000516133 MTFR1LQ9H019 292 aa15□□□□□ -0.01
SCARNA16.1-201ENST00000516133 ATG3Q9NT62 314 aa15□□□□□ -0.01
SCARNA16.1-201ENST00000516133 ITGB4P16144 1822 aa15□□□□□ -0.01
SCARNA16.1-201ENST00000516133 LY75O60449 1722 aa15□□□□□ -0.01
SCARNA16.1-201ENST00000516133 U2AF1L5P0DN76 240 aaPredicted RBP14.99□□□□□ -0.01
SCARNA16.1-201ENST00000516133 U2AF1Q01081 240 aaKnown RBP eCLIP14.99□□□□□ -0.01
SCARNA16.1-201ENST00000516133 NFATC2IPQ8NCF5 419 aa14.99□□□□□ -0.01
SCARNA16.1-201ENST00000516133 TOGARAM1Q9Y4F4 1720 aa14.98□□□□□ -0.01
SCARNA16.1-201ENST00000516133 FCHSD2O94868 740 aa14.98□□□□□ -0.01
SCARNA16.1-201ENST00000516133 FLAD1Q8NFF5 587 aa14.98□□□□□ -0.01
SCARNA16.1-201ENST00000516133 GAS2L2Q8NHY3 880 aa14.98□□□□□ -0.01
SCARNA16.1-201ENST00000516133 PPP1R1BQ9UD71 204 aaPredicted RBP14.98□□□□□ -0.01
SCARNA16.1-201ENST00000516133 ATF5Q9Y2D1 282 aaPredicted RBP14.98□□□□□ -0.01
SCARNA16.1-201ENST00000516133 PAPPAQ13219 1627 aa14.98□□□□□ -0.01
SCARNA16.1-201ENST00000516133 KDM6AO15550 1401 aaPredicted RBP14.98□□□□□ -0.01
SCARNA16.1-201ENST00000516133 ATP6V1AP38606 617 aa14.97□□□□□ -0.01
SCARNA16.1-201ENST00000516133 PNPLA7Q6ZV29 1317 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms