RNA–Protein interactions for RNA: ENST00000515835.2

PDE4D-225, Transcript of phosphodiesterase 4D, humanhuman

TSL 4 BASIC

Gene PDE4D, Length 590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-225ENST00000515835 ERVK-9P63128 1117 aa11.21□□□□□ -0.61
PDE4D-225ENST00000515835 CTC1Q2NKJ3 1217 aa11.21□□□□□ -0.61
PDE4D-225ENST00000515835 SIRT1Q96EB6 747 aa11.21□□□□□ -0.61
PDE4D-225ENST00000515835 CDCA7Q9BWT1 371 aaPredicted RBP11.21□□□□□ -0.61
PDE4D-225ENST00000515835 MAFBQ9Y5Q3 323 aaPredicted RBP11.21□□□□□ -0.61
PDE4D-225ENST00000515835 LILRA1O75019 489 aa11.2□□□□□ -0.62
PDE4D-225ENST00000515835 SMCPP49901 116 aaPredicted RBP11.2□□□□□ -0.62
PDE4D-225ENST00000515835 USP4Q13107 963 aa11.2□□□□□ -0.62
PDE4D-225ENST00000515835 CC2D2BQ6DHV5 1058 aa11.2□□□□□ -0.62
PDE4D-225ENST00000515835 ZFAND3Q9H8U3 227 aa11.2□□□□□ -0.62
PDE4D-225ENST00000515835 USP17L3A6NCW0 530 aa11.19□□□□□ -0.62
PDE4D-225ENST00000515835 USP17L4A6NCW7 530 aa11.19□□□□□ -0.62
PDE4D-225ENST00000515835 CAPN5O15484 640 aaPredicted RBP11.19□□□□□ -0.62
PDE4D-225ENST00000515835 MYCP01106 439 aaPredicted RBP11.19□□□□□ -0.62
PDE4D-225ENST00000515835 EML3Q32P44 896 aa11.19□□□□□ -0.62
PDE4D-225ENST00000515835 OXLD1Q5BKU9 147 aa11.19□□□□□ -0.62
PDE4D-225ENST00000515835 USP17L2Q6R6M4 530 aa11.19□□□□□ -0.62
PDE4D-225ENST00000515835 USP17L1Q7RTZ2 530 aa11.19□□□□□ -0.62
PDE4D-225ENST00000515835 CRIPAKQ8N1N5 446 aa11.19□□□□□ -0.62
PDE4D-225ENST00000515835 CYLDQ9NQC7 956 aa11.19□□□□□ -0.62
PDE4D-225ENST00000515835 CFAP70Q5T0N1 1121 aa11.18□□□□□ -0.62
PDE4D-225ENST00000515835 ESF1Q9H501 851 aaKnown RBP11.18□□□□□ -0.62
PDE4D-225ENST00000515835 SCTRP47872 440 aa11.17□□□□□ -0.62
PDE4D-225ENST00000515835 NCOA4Q13772 614 aa11.17□□□□□ -0.62
PDE4D-225ENST00000515835 Q6ZVU0 165 aa11.17□□□□□ -0.62
PDE4D-225ENST00000515835 LMOD1P29536 600 aaPredicted RBP11.16□□□□□ -0.62
PDE4D-225ENST00000515835 DEPDC4Q8N2C3 294 aa11.16□□□□□ -0.62
PDE4D-225ENST00000515835 NOD1Q9Y239 953 aa11.16□□□□□ -0.62
PDE4D-225ENST00000515835 LAMC3Q9Y6N6 1575 aa11.16□□□□□ -0.62
PDE4D-225ENST00000515835 AXIN1O15169 862 aa11.15□□□□□ -0.62
PDE4D-225ENST00000515835 ADD1P35611 737 aaKnown RBP11.15□□□□□ -0.62
PDE4D-225ENST00000515835 NESP48681 1621 aa11.15□□□□□ -0.62
PDE4D-225ENST00000515835 CBLBQ13191 982 aa11.14□□□□□ -0.63
PDE4D-225ENST00000515835 MEIOBQ8N635 442 aa11.14□□□□□ -0.63
PDE4D-225ENST00000515835 OSBPL3Q9H4L5 887 aa11.14□□□□□ -0.63
PDE4D-225ENST00000515835 ADH1AP07327 375 aa11.13□□□□□ -0.63
PDE4D-225ENST00000515835 TRIM50Q86XT4 487 aa11.13□□□□□ -0.63
PDE4D-225ENST00000515835 PDS5BQ9NTI5 1447 aa11.12□□□□□ -0.63
PDE4D-225ENST00000515835 CYP2U1Q7Z449 544 aa11.12□□□□□ -0.63
PDE4D-225ENST00000515835 AAASQ9NRG9 546 aa11.12□□□□□ -0.63
PDE4D-225ENST00000515835 MKRN1Q9UHC7 482 aaKnown RBP11.12□□□□□ -0.63
PDE4D-225ENST00000515835 ATP5J2-PTCD1G3V325 749 aa11.11□□□□□ -0.63
PDE4D-225ENST00000515835 Q6ZNB5 142 aa11.11□□□□□ -0.63
PDE4D-225ENST00000515835 RFX1P22670 979 aa11.1□□□□□ -0.63
PDE4D-225ENST00000515835 KANK4Q5T7N3 995 aaPredicted RBP11.1□□□□□ -0.63
PDE4D-225ENST00000515835 TSEN34Q9BSV6 310 aaKnown RBP11.1□□□□□ -0.63
PDE4D-225ENST00000515835 VRTNQ9H8Y1 702 aa11.1□□□□□ -0.63
PDE4D-225ENST00000515835 CADPSQ9ULU8 1353 aa11.1□□□□□ -0.63
PDE4D-225ENST00000515835 ST8SIA5O15466 376 aa11.09□□□□□ -0.63
PDE4D-225ENST00000515835 ATP1A2P50993 1020 aa11.09□□□□□ -0.63
PDE4D-225ENST00000515835 GTF2IP78347 998 aa11.09□□□□□ -0.63
PDE4D-225ENST00000515835 PCDHGA11Q9Y5H2 935 aa11.09□□□□□ -0.63
PDE4D-225ENST00000515835 UPP2O95045 317 aa11.08□□□□□ -0.64
PDE4D-225ENST00000515835 GNRH1P01148 92 aa11.08□□□□□ -0.64
PDE4D-225ENST00000515835 PTGIRP43119 386 aa11.08□□□□□ -0.64
PDE4D-225ENST00000515835 SRPK2P78362 688 aaKnown RBP11.08□□□□□ -0.64
PDE4D-225ENST00000515835 MRPL14Q6P1L8 145 aaKnown RBP11.08□□□□□ -0.64
PDE4D-225ENST00000515835 KDF1Q8NAX2 398 aaPredicted RBP11.08□□□□□ -0.64
PDE4D-225ENST00000515835 ARID3AQ99856 593 aa11.08□□□□□ -0.64
PDE4D-225ENST00000515835 LINC00528Q8N1L1 170 aa11.07□□□□□ -0.64
PDE4D-225ENST00000515835 PBXIP1Q96AQ6 731 aa11.07□□□□□ -0.64
PDE4D-225ENST00000515835 AGBL1Q96MI9 1066 aa11.07□□□□□ -0.64
PDE4D-225ENST00000515835 SCARF1Q14162 830 aa11.06□□□□□ -0.64
PDE4D-225ENST00000515835 OGFOD1Q8N543 542 aa11.06□□□□□ -0.64
PDE4D-225ENST00000515835 DNAAF2Q9NVR5 837 aaKnown RBP11.06□□□□□ -0.64
PDE4D-225ENST00000515835 RSF1Q96T23 1441 aaPredicted RBP11.06□□□□□ -0.64
PDE4D-225ENST00000515835 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.05□□□□□ -0.64
PDE4D-225ENST00000515835 PPP1R15AO75807 674 aaPredicted RBP11.05□□□□□ -0.64
PDE4D-225ENST00000515835 RASA1P20936 1047 aa11.05□□□□□ -0.64
PDE4D-225ENST00000515835 CLDN10P78369 228 aa11.05□□□□□ -0.64
PDE4D-225ENST00000515835 RELBQ01201 579 aa11.05□□□□□ -0.64
PDE4D-225ENST00000515835 LARP1Q6PKG0 1096 aaKnown RBP11.05□□□□□ -0.64
PDE4D-225ENST00000515835 TRIM46Q7Z4K8 759 aa11.05□□□□□ -0.64
PDE4D-225ENST00000515835 LARGE2Q8N3Y3 721 aa11.05□□□□□ -0.64
PDE4D-225ENST00000515835 ATP13A2Q9NQ11 1180 aa11.05□□□□□ -0.64
PDE4D-225ENST00000515835 WIZO95785 1651 aa11.04□□□□□ -0.64
PDE4D-225ENST00000515835 THOC2Q8NI27 1593 aaKnown RBP11.04□□□□□ -0.64
PDE4D-225ENST00000515835 FAM196BA6NMK8 535 aa11.04□□□□□ -0.64
PDE4D-225ENST00000515835 SPINT1O43278 529 aa11.04□□□□□ -0.64
PDE4D-225ENST00000515835 BMP1P13497 986 aa11.04□□□□□ -0.64
PDE4D-225ENST00000515835 ESCO1Q5FWF5 840 aa11.04□□□□□ -0.64
PDE4D-225ENST00000515835 ZBTB7BO15156 539 aaPredicted RBP11.03□□□□□ -0.64
PDE4D-225ENST00000515835 PSME1Q06323 249 aa11.03□□□□□ -0.64
PDE4D-225ENST00000515835 A0A1W2PRU2 124 aa11.02□□□□□ -0.65
PDE4D-225ENST00000515835 WASLO00401 505 aaPredicted RBP11.02□□□□□ -0.65
PDE4D-225ENST00000515835 LCE2BO14633 110 aa11.02□□□□□ -0.65
PDE4D-225ENST00000515835 BMP2P12643 396 aa11.02□□□□□ -0.65
PDE4D-225ENST00000515835 CLN3Q13286 438 aa11.02□□□□□ -0.65
PDE4D-225ENST00000515835 SIX5Q8N196 739 aa11.02□□□□□ -0.65
PDE4D-225ENST00000515835 ZNF395Q9H8N7 513 aaPredicted RBP11.02□□□□□ -0.65
PDE4D-225ENST00000515835 ARHGEF10LQ9HCE6 1279 aa11.02□□□□□ -0.65
PDE4D-225ENST00000515835 DACH1Q9UI36 760 aa11.02□□□□□ -0.65
PDE4D-225ENST00000515835 USP17L15C9J2P7 530 aa11.01□□□□□ -0.65
PDE4D-225ENST00000515835 USP17L10C9JJH3 530 aa11.01□□□□□ -0.65
PDE4D-225ENST00000515835 USP17L13C9JLJ4 530 aa11.01□□□□□ -0.65
PDE4D-225ENST00000515835 USP17L12C9JPN9 530 aa11.01□□□□□ -0.65
PDE4D-225ENST00000515835 USP17L11C9JVI0 530 aa11.01□□□□□ -0.65
PDE4D-225ENST00000515835 USP17L21D6R901 530 aa11.01□□□□□ -0.65
PDE4D-225ENST00000515835 USP17L18D6R9N7 530 aa11.01□□□□□ -0.65
PDE4D-225ENST00000515835 USP17L22D6RA61 530 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms