RNA–Protein interactions for RNA: ENST00000515752.5

SDHA-218, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-218ENST00000515752 GNAT3A8MTJ3 354 aa19.37■□□□□ 0.69
SDHA-218ENST00000515752 RGS3P49796 1198 aa19.37■□□□□ 0.69
SDHA-218ENST00000515752 MST1RQ04912 1400 aa19.37■□□□□ 0.69
SDHA-218ENST00000515752 PHRF1Q9P1Y6 1649 aaKnown RBP19.37■□□□□ 0.69
SDHA-218ENST00000515752 ELL2O00472 640 aaPredicted RBP19.37■□□□□ 0.69
SDHA-218ENST00000515752 IPO9Q96P70 1041 aaKnown RBP19.37■□□□□ 0.69
SDHA-218ENST00000515752 SOS1Q07889 1333 aaPredicted RBP19.36■□□□□ 0.69
SDHA-218ENST00000515752 ABCC4O15439 1325 aa19.35■□□□□ 0.69
SDHA-218ENST00000515752 GCP02774 474 aa19.35■□□□□ 0.69
SDHA-218ENST00000515752 KRT28Q7Z3Y7 464 aa19.35■□□□□ 0.69
SDHA-218ENST00000515752 SLIT3O75094 1523 aa19.35■□□□□ 0.69
SDHA-218ENST00000515752 ERICH6Q7L0X2 663 aa19.35■□□□□ 0.69
SDHA-218ENST00000515752 SKAP1Q86WV1 359 aa19.35■□□□□ 0.69
SDHA-218ENST00000515752 USP19O94966 1318 aa19.34■□□□□ 0.69
SDHA-218ENST00000515752 MSH5O43196 834 aa19.34■□□□□ 0.69
SDHA-218ENST00000515752 CADPS2Q86UW7 1296 aa19.34■□□□□ 0.69
SDHA-218ENST00000515752 ARHGEF25Q86VW2 580 aa19.33■□□□□ 0.69
SDHA-218ENST00000515752 LTV1Q96GA3 475 aaPredicted RBP19.33■□□□□ 0.69
SDHA-218ENST00000515752 TSPYL4Q9UJ04 414 aa19.33■□□□□ 0.69
SDHA-218ENST00000515752 TMEM94Q12767 1356 aa19.33■□□□□ 0.69
SDHA-218ENST00000515752 MAP3K5Q99683 1374 aa19.33■□□□□ 0.69
SDHA-218ENST00000515752 PTPRCP08575 1304 aa19.33■□□□□ 0.68
SDHA-218ENST00000515752 ZBTB7BO15156 539 aaPredicted RBP19.32■□□□□ 0.68
SDHA-218ENST00000515752 LTN1O94822 1766 aa19.32■□□□□ 0.68
SDHA-218ENST00000515752 C8orf34Q49A92 452 aa19.31■□□□□ 0.68
SDHA-218ENST00000515752 PDZRN3Q9UPQ7 1066 aa19.31■□□□□ 0.68
SDHA-218ENST00000515752 SMC5Q8IY18 1101 aa19.3■□□□□ 0.68
SDHA-218ENST00000515752 ANP32EQ9BTT0 268 aa19.3■□□□□ 0.68
SDHA-218ENST00000515752 CHMP4AQ9BY43 222 aa19.29■□□□□ 0.68
SDHA-218ENST00000515752 TAF7Q15545 349 aaPredicted RBP19.28■□□□□ 0.68
SDHA-218ENST00000515752 AMOTQ4VCS5 1084 aa19.28■□□□□ 0.68
SDHA-218ENST00000515752 INTS3Q68E01 1043 aaKnown RBP19.28■□□□□ 0.68
SDHA-218ENST00000515752 DDRGK1Q96HY6 314 aa19.28■□□□□ 0.68
SDHA-218ENST00000515752 NOP58Q9Y2X3 529 aaKnown RBP19.28■□□□□ 0.68
SDHA-218ENST00000515752 TRPM3Q9HCF6 1732 aaPredicted RBP19.28■□□□□ 0.68
SDHA-218ENST00000515752 NBPF6Q5VWK0 638 aa19.28■□□□□ 0.68
SDHA-218ENST00000515752 LMOD2Q6P5Q4 547 aa19.28■□□□□ 0.68
SDHA-218ENST00000515752 NBPF4Q96M43 638 aa19.28■□□□□ 0.68
SDHA-218ENST00000515752 ZBTB47Q9UFB7 747 aaPredicted RBP19.28■□□□□ 0.68
SDHA-218ENST00000515752 NPHP3Q7Z494 1330 aa19.27■□□□□ 0.68
SDHA-218ENST00000515752 LRRC37A3O60309 1634 aa19.27■□□□□ 0.67
SDHA-218ENST00000515752 MSH6P52701 1360 aa19.27■□□□□ 0.67
SDHA-218ENST00000515752 XPCQ01831 940 aaPredicted RBP19.26■□□□□ 0.67
SDHA-218ENST00000515752 PLEKHO1Q53GL0 409 aaPredicted RBP19.26■□□□□ 0.67
SDHA-218ENST00000515752 NCAPD2Q15021 1401 aa19.26■□□□□ 0.67
SDHA-218ENST00000515752 IL17REQ8NFR9 667 aa19.25■□□□□ 0.67
SDHA-218ENST00000515752 GCC1Q96CN9 775 aa19.25■□□□□ 0.67
SDHA-218ENST00000515752 NPM2Q86SE8 214 aaKnown RBP19.25■□□□□ 0.67
SDHA-218ENST00000515752 CCDC30Q5VVM6 783 aa19.24■□□□□ 0.67
SDHA-218ENST00000515752 STK31Q9BXU1 1019 aa19.24■□□□□ 0.67
SDHA-218ENST00000515752 CEMIPQ8WUJ3 1361 aa19.23■□□□□ 0.67
SDHA-218ENST00000515752 ZBTB7CA1YPR0 619 aa19.23■□□□□ 0.67
SDHA-218ENST00000515752 SLC4A2P04920 1241 aa19.23■□□□□ 0.67
SDHA-218ENST00000515752 KRT24Q2M2I5 525 aa19.23■□□□□ 0.67
SDHA-218ENST00000515752 AKAP4Q5JQC9 854 aa19.23■□□□□ 0.67
SDHA-218ENST00000515752 USHBP1Q8N6Y0 703 aa19.23■□□□□ 0.67
SDHA-218ENST00000515752 ANKRD24Q8TF21 1146 aa19.23■□□□□ 0.67
SDHA-218ENST00000515752 MIS18AQ9NYP9 233 aa19.23■□□□□ 0.67
SDHA-218ENST00000515752 HSPA2P54652 639 aa19.21■□□□□ 0.67
SDHA-218ENST00000515752 NUCB1Q02818 461 aa19.21■□□□□ 0.67
SDHA-218ENST00000515752 ALS2Q96Q42 1657 aa19.21■□□□□ 0.67
SDHA-218ENST00000515752 MYT1Q01538 1121 aa19.21■□□□□ 0.67
SDHA-218ENST00000515752 OVOS2A0A0G2JMS6 1433 aa19.2■□□□□ 0.66
SDHA-218ENST00000515752 PLEKHG2Q9H7P9 1386 aa19.19■□□□□ 0.66
SDHA-218ENST00000515752 HOXB7P09629 217 aa19.19■□□□□ 0.66
SDHA-218ENST00000515752 CCT4P50991 539 aaKnown RBP19.19■□□□□ 0.66
SDHA-218ENST00000515752 RGS12O14924 1447 aa19.19■□□□□ 0.66
SDHA-218ENST00000515752 STRCP1A6NGW2 1772 aa19.19■□□□□ 0.66
SDHA-218ENST00000515752 C1orf141Q5JVX7 400 aa19.18■□□□□ 0.66
SDHA-218ENST00000515752 RPAP2Q8IXW5 612 aaPredicted RBP19.18■□□□□ 0.66
SDHA-218ENST00000515752 TNS3Q68CZ2 1445 aa19.18■□□□□ 0.66
SDHA-218ENST00000515752 ZNF530Q6P9A1 599 aaPredicted RBP19.18■□□□□ 0.66
SDHA-218ENST00000515752 LRRC59Q96AG4 307 aaKnown RBP19.18■□□□□ 0.66
SDHA-218ENST00000515752 UPF2Q9HAU5 1272 aaKnown RBP19.18■□□□□ 0.66
SDHA-218ENST00000515752 ABCC6O95255 1503 aa19.18■□□□□ 0.66
SDHA-218ENST00000515752 LMTK3Q96Q04 1460 aa19.17■□□□□ 0.66
SDHA-218ENST00000515752 ERBB3P21860 1342 aa19.17■□□□□ 0.66
SDHA-218ENST00000515752 CHD1LQ86WJ1 897 aa19.17■□□□□ 0.66
SDHA-218ENST00000515752 CAMTA1Q9Y6Y1 1673 aa19.17■□□□□ 0.66
SDHA-218ENST00000515752 TEFQ10587 303 aa19.16■□□□□ 0.66
SDHA-218ENST00000515752 MED1Q15648 1581 aaPredicted RBP19.16■□□□□ 0.66
SDHA-218ENST00000515752 AXIN2Q9Y2T1 843 aa19.15■□□□□ 0.66
SDHA-218ENST00000515752 SPATA31A3Q5VYP0 1347 aa19.15■□□□□ 0.66
SDHA-218ENST00000515752 LMO7Q8WWI1 1683 aa19.14■□□□□ 0.65
SDHA-218ENST00000515752 VIRMAQ69YN4 1812 aaKnown RBP19.14■□□□□ 0.65
SDHA-218ENST00000515752 KDM4FA0A1W2PPD8 638 aa19.14■□□□□ 0.65
SDHA-218ENST00000515752 ZC3H6P61129 1189 aaKnown RBP19.14■□□□□ 0.65
SDHA-218ENST00000515752 PXDNQ92626 1479 aa19.13■□□□□ 0.65
SDHA-218ENST00000515752 FLIIQ13045 1269 aa19.13■□□□□ 0.65
SDHA-218ENST00000515752 ANKRD44Q8N8A2 993 aa19.13■□□□□ 0.65
SDHA-218ENST00000515752 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.13■□□□□ 0.65
SDHA-218ENST00000515752 RNMTO43148 476 aaKnown RBP19.12■□□□□ 0.65
SDHA-218ENST00000515752 SIRT2Q8IXJ6 389 aa19.12■□□□□ 0.65
SDHA-218ENST00000515752 RAPGEF4Q8WZA2 1011 aa19.12■□□□□ 0.65
SDHA-218ENST00000515752 C1orf115Q9H7X2 142 aa19.12■□□□□ 0.65
SDHA-218ENST00000515752 DAXXQ9UER7 740 aaPredicted RBP19.12■□□□□ 0.65
SDHA-218ENST00000515752 CPDO75976 1380 aa19.12■□□□□ 0.65
SDHA-218ENST00000515752 EIF4A1P60842 406 aaKnown RBP19.11■□□□□ 0.65
SDHA-218ENST00000515752 ANKRD45Q5TZF3 282 aa19.11■□□□□ 0.65
SDHA-218ENST00000515752 DCTPP1Q9H773 170 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms