RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 RALBP1Q15311 655 aa34.93■■■■□ 3.18
DDR1-279ENST00000515529 RGPD1P0DJD0 1748 aa34.92■■■■□ 3.18
DDR1-279ENST00000515529 BAG6P46379 1132 aa34.91■■■■□ 3.18
DDR1-279ENST00000515529 SPG7Q9UQ90 795 aa34.91■■■■□ 3.18
DDR1-279ENST00000515529 BCL9O00512 1426 aa34.9■■■■□ 3.18
DDR1-279ENST00000515529 PCDH11XQ9BZA7 1347 aa34.9■■■■□ 3.18
DDR1-279ENST00000515529 PCDH11YQ9BZA8 1340 aa34.9■■■■□ 3.18
DDR1-279ENST00000515529 SULT6B1Q6IMI4 303 aa34.9■■■■□ 3.18
DDR1-279ENST00000515529 U2SURPO15042 1029 aaKnown RBP34.87■■■■□ 3.17
DDR1-279ENST00000515529 AEBP1Q8IUX7 1158 aa34.86■■■■□ 3.17
DDR1-279ENST00000515529 COL3A1P02461 1466 aaPredicted RBP34.85■■■■□ 3.17
DDR1-279ENST00000515529 APBA3O96018 575 aa34.85■■■■□ 3.17
DDR1-279ENST00000515529 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.85■■■■□ 3.17
DDR1-279ENST00000515529 NUDCQ9Y266 331 aa34.85■■■■□ 3.17
DDR1-279ENST00000515529 DEFB132Q7Z7B7 95 aa34.84■■■■□ 3.17
DDR1-279ENST00000515529 PLEKHG2Q9H7P9 1386 aa34.84■■■■□ 3.17
DDR1-279ENST00000515529 ACSBG1Q96GR2 724 aa34.83■■■■□ 3.17
DDR1-279ENST00000515529 BCL11BQ9C0K0 894 aaPredicted RBP34.83■■■■□ 3.17
DDR1-279ENST00000515529 PLEKHO1Q53GL0 409 aaPredicted RBP34.82■■■■□ 3.16
DDR1-279ENST00000515529 HMOX1P09601 288 aa34.81■■■■□ 3.16
DDR1-279ENST00000515529 KDRP35968 1356 aa34.81■■■■□ 3.16
DDR1-279ENST00000515529 PKD1L3Q7Z443 1732 aa34.81■■■■□ 3.16
DDR1-279ENST00000515529 SHANK3Q9BYB0 1731 aa34.81■■■■□ 3.16
DDR1-279ENST00000515529 TNS1Q9HBL0 1735 aaKnown RBP34.81■■■■□ 3.16
DDR1-279ENST00000515529 SBF2Q86WG5 1849 aa34.79■■■■□ 3.16
DDR1-279ENST00000515529 AMOTQ4VCS5 1084 aa34.79■■■■□ 3.16
DDR1-279ENST00000515529 MYBBP1AQ9BQG0 1328 aaKnown RBP34.78■■■■□ 3.16
DDR1-279ENST00000515529 CYP27B1O15528 508 aa34.77■■■■□ 3.16
DDR1-279ENST00000515529 EN1Q05925 392 aaPredicted RBP34.77■■■■□ 3.16
DDR1-279ENST00000515529 SYTL4Q96C24 671 aaPredicted RBP34.76■■■■□ 3.16
DDR1-279ENST00000515529 KCNQ2O43526 872 aa34.75■■■■□ 3.15
DDR1-279ENST00000515529 IFNL2Q8IZJ0 200 aa34.75■■■■□ 3.15
DDR1-279ENST00000515529 KAT6BQ8WYB5 2073 aa34.74■■■■□ 3.15
DDR1-279ENST00000515529 NHSQ6T4R5 1651 aa34.73■■■■□ 3.15
DDR1-279ENST00000515529 ZNF530Q6P9A1 599 aaPredicted RBP34.73■■■■□ 3.15
DDR1-279ENST00000515529 PRKRIP1Q9H875 184 aaPredicted RBP34.73■■■■□ 3.15
DDR1-279ENST00000515529 U2AF1L5P0DN76 240 aaPredicted RBP34.72■■■■□ 3.15
DDR1-279ENST00000515529 U2AF1Q01081 240 aaKnown RBP eCLIP34.72■■■■□ 3.15
DDR1-279ENST00000515529 PTF1AQ7RTS3 328 aa34.72■■■■□ 3.15
DDR1-279ENST00000515529 PHKG2P15735 406 aa34.71■■■■□ 3.15
DDR1-279ENST00000515529 C1orf141Q5JVX7 400 aa34.71■■■■□ 3.15
DDR1-279ENST00000515529 PRIM1P49642 420 aaKnown RBP34.7■■■■□ 3.15
DDR1-279ENST00000515529 DOT1LQ8TEK3 1739 aa34.69■■■■□ 3.14
DDR1-279ENST00000515529 HSP90AB1P08238 724 aaKnown RBP34.68■■■■□ 3.14
DDR1-279ENST00000515529 EZH2Q15910 746 aaKnown RBP34.68■■■■□ 3.14
DDR1-279ENST00000515529 NKX1-1Q15270 411 aaPredicted RBP34.67■■■■□ 3.14
DDR1-279ENST00000515529 CAMKK2Q96RR4 588 aa34.67■■■■□ 3.14
DDR1-279ENST00000515529 PLSCR1O15162 318 aa34.66■■■■□ 3.14
DDR1-279ENST00000515529 ANP32CO43423 234 aa34.62■■■■□ 3.13
DDR1-279ENST00000515529 PRKAR2BP31323 418 aa34.62■■■■□ 3.13
DDR1-279ENST00000515529 DCAF5Q96JK2 942 aa34.61■■■■□ 3.13
DDR1-279ENST00000515529 FCHSD2O94868 740 aa34.6■■■■□ 3.13
DDR1-279ENST00000515529 MPRIPQ6WCQ1 1025 aa34.6■■■■□ 3.13
DDR1-279ENST00000515529 RSPH6AQ9H0K4 717 aa34.6■■■■□ 3.13
DDR1-279ENST00000515529 BTAF1O14981 1849 aa34.6■■■■□ 3.13
DDR1-279ENST00000515529 NEFMP07197 916 aa34.58■■■■□ 3.13
DDR1-279ENST00000515529 AKAP4Q5JQC9 854 aa34.58■■■■□ 3.13
DDR1-279ENST00000515529 RGPD3A6NKT7 1758 aaPredicted RBP34.57■■■■□ 3.12
DDR1-279ENST00000515529 RGPD4Q7Z3J3 1758 aa34.57■■■■□ 3.12
DDR1-279ENST00000515529 MTHFSDQ2M296 383 aaKnown RBP34.57■■■■□ 3.12
DDR1-279ENST00000515529 GAS2L2Q8NHY3 880 aa34.57■■■■□ 3.12
DDR1-279ENST00000515529 TMOD3Q9NYL9 352 aa34.57■■■■□ 3.12
DDR1-279ENST00000515529 PNNQ9H307 717 aaKnown RBP34.54■■■■□ 3.12
DDR1-279ENST00000515529 TOGARAM1Q9Y4F4 1720 aa34.54■■■■□ 3.12
DDR1-279ENST00000515529 ERVV-2B6SEH9 535 aa34.53■■■■□ 3.12
DDR1-279ENST00000515529 TXNRD1Q16881 649 aa34.53■■■■□ 3.12
DDR1-279ENST00000515529 WDR43Q15061 677 aaKnown RBP eCLIP34.52■■■■□ 3.12
DDR1-279ENST00000515529 NBPF14Q5TI25 921 aa34.51■■■■□ 3.12
DDR1-279ENST00000515529 RREB1Q92766 1687 aa34.5■■■■□ 3.11
DDR1-279ENST00000515529 CABP4P57796 275 aa34.5■■■■□ 3.11
DDR1-279ENST00000515529 PIGBQ92521 554 aa34.5■■■■□ 3.11
DDR1-279ENST00000515529 KDM6AO15550 1401 aaPredicted RBP34.49■■■■□ 3.11
DDR1-279ENST00000515529 PHACTR3Q96KR7 559 aa34.49■■■■□ 3.11
DDR1-279ENST00000515529 ITGB4P16144 1822 aa34.48■■■■□ 3.11
DDR1-279ENST00000515529 SMARCC1Q92922 1105 aaPredicted RBP34.48■■■■□ 3.11
DDR1-279ENST00000515529 GNAT3A8MTJ3 354 aa34.46■■■■□ 3.11
DDR1-279ENST00000515529 PROM2Q8N271 834 aa34.46■■■■□ 3.11
DDR1-279ENST00000515529 MAPK8IP3Q9UPT6 1336 aa34.46■■■■□ 3.11
DDR1-279ENST00000515529 MAP3K5Q99683 1374 aa34.46■■■■□ 3.11
DDR1-279ENST00000515529 NUP188Q5SRE5 1749 aa34.45■■■■□ 3.11
DDR1-279ENST00000515529 SLC27A3Q5K4L6 730 aa34.45■■■■□ 3.11
DDR1-279ENST00000515529 RNMTO43148 476 aaKnown RBP34.44■■■■□ 3.1
DDR1-279ENST00000515529 PALLDQ8WX93 1383 aa34.44■■■■□ 3.1
DDR1-279ENST00000515529 LGR6Q9HBX8 967 aa34.41■■■■□ 3.1
DDR1-279ENST00000515529 CCNL1Q9UK58 526 aaPredicted RBP34.41■■■■□ 3.1
DDR1-279ENST00000515529 NFATC2IPQ8NCF5 419 aa34.4■■■■□ 3.1
DDR1-279ENST00000515529 SCN11AQ9UI33 1791 aa34.39■■■■□ 3.1
DDR1-279ENST00000515529 RTF1Q92541 710 aaKnown RBP34.39■■■■□ 3.1
DDR1-279ENST00000515529 PLEKHF1Q96S99 279 aa34.38■■■■□ 3.09
DDR1-279ENST00000515529 SLC52A2Q9HAB3 445 aa34.38■■■■□ 3.09
DDR1-279ENST00000515529 STK32BQ9NY57 414 aa34.38■■■■□ 3.09
DDR1-279ENST00000515529 ASAP1Q9ULH1 1129 aa34.38■■■■□ 3.09
DDR1-279ENST00000515529 PSDA5PKW4 1024 aaPredicted RBP34.37■■■■□ 3.09
DDR1-279ENST00000515529 HMGB2P26583 209 aaKnown RBP34.37■■■■□ 3.09
DDR1-279ENST00000515529 R3HDM1Q15032 1099 aaKnown RBP34.37■■■■□ 3.09
DDR1-279ENST00000515529 TEFQ10587 303 aa34.35■■■■□ 3.09
DDR1-279ENST00000515529 ATG3Q9NT62 314 aa34.35■■■■□ 3.09
DDR1-279ENST00000515529 LRRC4BQ9NT99 713 aa34.35■■■■□ 3.09
DDR1-279ENST00000515529 LY75O60449 1722 aa34.35■■■■□ 3.09
DDR1-279ENST00000515529 KCNQ4P56696 695 aa34.33■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms